RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SPATA31A7Q8IWB4 1347 aa19.11■□□□□ 0.65
TPM4-202ENST00000344824 THSD7AQ9UPZ6 1657 aa19.1■□□□□ 0.65
TPM4-202ENST00000344824 WNK3Q9BYP7 1800 aa19.1■□□□□ 0.65
TPM4-202ENST00000344824 UPF1Q92900 1129 aaKnown RBP eCLIP19.1■□□□□ 0.651e-7■□□□□ 8.3
TPM4-202ENST00000344824 EP400Q96L91 3159 aa19.09■□□□□ 0.65
TPM4-202ENST00000344824 USP31Q70CQ4 1352 aa19.08■□□□□ 0.65
TPM4-202ENST00000344824 OVOS2A0A0J9YW53 1432 aa19.08■□□□□ 0.64
TPM4-202ENST00000344824 OVOS2Q6IE36 1432 aa19.08■□□□□ 0.64
TPM4-202ENST00000344824 LARP1Q6PKG0 1096 aaKnown RBP19.08■□□□□ 0.64
TPM4-202ENST00000344824 AATKQ6ZMQ8 1374 aa19.07■□□□□ 0.64
TPM4-202ENST00000344824 SPATA31A1Q5TZJ5 1347 aa19.07■□□□□ 0.64
TPM4-202ENST00000344824 CSB-PGBD3P0DP91 1061 aa19.05■□□□□ 0.64
TPM4-202ENST00000344824 COG3Q96JB2 828 aa19.05■□□□□ 0.64
TPM4-202ENST00000344824 NSD3Q9BZ95 1437 aa19.05■□□□□ 0.64
TPM4-202ENST00000344824 KRT27Q7Z3Y8 459 aa19.04■□□□□ 0.64
TPM4-202ENST00000344824 ARHGEF25Q86VW2 580 aa19.04■□□□□ 0.64
TPM4-202ENST00000344824 ABCC6O95255 1503 aa19.04■□□□□ 0.64
TPM4-202ENST00000344824 CRB1P82279 1406 aa19.04■□□□□ 0.64
TPM4-202ENST00000344824 TOM1L2Q6ZVM7 507 aa19.03■□□□□ 0.64
TPM4-202ENST00000344824 AXIN2Q9Y2T1 843 aa19.02■□□□□ 0.64
TPM4-202ENST00000344824 PARP4Q9UKK3 1724 aaKnown RBP19.02■□□□□ 0.64
TPM4-202ENST00000344824 GGNBP2Q9H3C7 697 aa19.01■□□□□ 0.63
TPM4-202ENST00000344824 ANKRD26Q9UPS8 1709 aa19.01■□□□□ 0.63
TPM4-202ENST00000344824 C11orf95C9JLR9 678 aaPredicted RBP19■□□□□ 0.63
TPM4-202ENST00000344824 ONECUT3O60422 494 aaPredicted RBP19■□□□□ 0.63
TPM4-202ENST00000344824 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
TPM4-202ENST00000344824 LRRC37A3O60309 1634 aa19■□□□□ 0.63
TPM4-202ENST00000344824 FAM182BQ5T319 152 aa19■□□□□ 0.63
TPM4-202ENST00000344824 WDR17Q8IZU2 1322 aa18.99■□□□□ 0.63
TPM4-202ENST00000344824 FAM208AQ9UK61 1670 aaKnown RBP18.99■□□□□ 0.63
TPM4-202ENST00000344824 RGPD1P0DJD0 1748 aa18.99■□□□□ 0.63
TPM4-202ENST00000344824 RGPD2P0DJD1 1756 aa18.98■□□□□ 0.63
TPM4-202ENST00000344824 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
TPM4-202ENST00000344824 CCDC7Q96M83 1385 aa18.97■□□□□ 0.63
TPM4-202ENST00000344824 FYB1O15117 783 aa18.96■□□□□ 0.63
TPM4-202ENST00000344824 FBLN1P23142 703 aa18.96■□□□□ 0.63
TPM4-202ENST00000344824 BARGINQ6ZT62 677 aa18.96■□□□□ 0.63
TPM4-202ENST00000344824 MAP2P11137 1827 aaKnown RBP18.96■□□□□ 0.63
TPM4-202ENST00000344824 KIF7Q2M1P5 1343 aa18.96■□□□□ 0.63
TPM4-202ENST00000344824 CARD14Q9BXL6 1004 aa18.95■□□□□ 0.62
TPM4-202ENST00000344824 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
TPM4-202ENST00000344824 AMPHP49418 695 aa18.94■□□□□ 0.62
TPM4-202ENST00000344824 PDE3BQ13370 1112 aa18.94■□□□□ 0.62
TPM4-202ENST00000344824 SF3B2Q13435 895 aaKnown RBP18.94■□□□□ 0.62
TPM4-202ENST00000344824 LTV1Q96GA3 475 aaPredicted RBP18.94■□□□□ 0.62
TPM4-202ENST00000344824 ERBB3P21860 1342 aa18.94■□□□□ 0.62
TPM4-202ENST00000344824 BLMP54132 1417 aaPredicted RBP18.94■□□□□ 0.62
TPM4-202ENST00000344824 TNS1Q9HBL0 1735 aaKnown RBP18.94■□□□□ 0.62
TPM4-202ENST00000344824 MAP3K19Q56UN5 1328 aa18.93■□□□□ 0.62
TPM4-202ENST00000344824 RRS1Q15050 365 aaKnown RBP18.93■□□□□ 0.62
TPM4-202ENST00000344824 ANKRD24Q8TF21 1146 aa18.93■□□□□ 0.62
TPM4-202ENST00000344824 NLRP2Q9NX02 1062 aa18.93■□□□□ 0.62
TPM4-202ENST00000344824 PEAK1Q9H792 1746 aa18.93■□□□□ 0.62
TPM4-202ENST00000344824 CGNL1Q0VF96 1302 aa18.92■□□□□ 0.62
TPM4-202ENST00000344824 DDX10Q13206 875 aaKnown RBP18.91■□□□□ 0.62
TPM4-202ENST00000344824 CARD10Q9BWT7 1032 aa18.91■□□□□ 0.62
TPM4-202ENST00000344824 PANK3Q9H999 370 aa18.91■□□□□ 0.62
TPM4-202ENST00000344824 KAT6BQ8WYB5 2073 aa18.9■□□□□ 0.62
TPM4-202ENST00000344824 RTL1A6NKG5 1358 aa18.9■□□□□ 0.62
TPM4-202ENST00000344824 HOXC9P31274 260 aa18.9■□□□□ 0.62
TPM4-202ENST00000344824 DDB1Q16531 1140 aa18.9■□□□□ 0.62
TPM4-202ENST00000344824 IP6K1Q92551 441 aa18.9■□□□□ 0.62
TPM4-202ENST00000344824 SBF2Q86WG5 1849 aa18.89■□□□□ 0.61
TPM4-202ENST00000344824 CCDC125Q86Z20 511 aa18.89■□□□□ 0.61
TPM4-202ENST00000344824 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
TPM4-202ENST00000344824 DEFB132Q7Z7B7 95 aa18.87■□□□□ 0.61
TPM4-202ENST00000344824 OVOS2A0A0G2JMS6 1433 aa18.86■□□□□ 0.61
TPM4-202ENST00000344824 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
TPM4-202ENST00000344824 PPM1GO15355 546 aaPredicted RBP18.86■□□□□ 0.61
TPM4-202ENST00000344824 TNNT2P45379 298 aaPredicted RBP18.86■□□□□ 0.61
TPM4-202ENST00000344824 TNS2Q63HR2 1409 aa18.85■□□□□ 0.61
TPM4-202ENST00000344824 FAM196AQ6ZSG2 479 aa18.85■□□□□ 0.61
TPM4-202ENST00000344824 CDCA7Q9BWT1 371 aaPredicted RBP18.85■□□□□ 0.61
TPM4-202ENST00000344824 EMILIN1Q9Y6C2 1016 aa18.85■□□□□ 0.61
TPM4-202ENST00000344824 FLT4P35916 1363 aa18.85■□□□□ 0.61
TPM4-202ENST00000344824 TRIM37O94972 964 aa18.84■□□□□ 0.61
TPM4-202ENST00000344824 BAG6P46379 1132 aa18.84■□□□□ 0.61
TPM4-202ENST00000344824 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
TPM4-202ENST00000344824 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
TPM4-202ENST00000344824 EXOC5O00471 708 aa18.82■□□□□ 0.6
TPM4-202ENST00000344824 IL2RBP14784 551 aa18.82■□□□□ 0.6
TPM4-202ENST00000344824 NSD2O96028 1365 aa18.81■□□□□ 0.6
TPM4-202ENST00000344824 USHBP1Q8N6Y0 703 aa18.81■□□□□ 0.6
TPM4-202ENST00000344824 HSP90AB2PQ58FF8 381 aa18.8■□□□□ 0.6
TPM4-202ENST00000344824 SHANK3Q9BYB0 1731 aa18.79■□□□□ 0.6
TPM4-202ENST00000344824 INSRP06213 1382 aa18.79■□□□□ 0.6
TPM4-202ENST00000344824 EN1Q05925 392 aaPredicted RBP18.79■□□□□ 0.6
TPM4-202ENST00000344824 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
TPM4-202ENST00000344824 KIF24Q5T7B8 1368 aa18.78■□□□□ 0.6
TPM4-202ENST00000344824 MORC1Q86VD1 984 aa18.78■□□□□ 0.6
TPM4-202ENST00000344824 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
TPM4-202ENST00000344824 APBA3O96018 575 aa18.77■□□□□ 0.6
TPM4-202ENST00000344824 NHSQ6T4R5 1651 aa18.77■□□□□ 0.6
TPM4-202ENST00000344824 RREB1Q92766 1687 aa18.77■□□□□ 0.6
TPM4-202ENST00000344824 MEGF6O75095 1541 aa18.77■□□□□ 0.6
TPM4-202ENST00000344824 DOT1LQ8TEK3 1739 aa18.76■□□□□ 0.59
TPM4-202ENST00000344824 NBPF6Q5VWK0 638 aa18.75■□□□□ 0.59
TPM4-202ENST00000344824 NBPF4Q96M43 638 aa18.75■□□□□ 0.59
TPM4-202ENST00000344824 NUP188Q5SRE5 1749 aa18.75■□□□□ 0.59
TPM4-202ENST00000344824 POLKQ9UBT6 870 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms