RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 CFAP74Q9C0B2 1584 aa16.65■□□□□ 0.26
SNX21-202ENST00000344780 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
SNX21-202ENST00000344780 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
SNX21-202ENST00000344780 MCM10Q7L590 875 aa16.65■□□□□ 0.26
SNX21-202ENST00000344780 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
SNX21-202ENST00000344780 CD163L1Q9NR16 1453 aa16.65■□□□□ 0.26
SNX21-202ENST00000344780 MBIPQ9NS73 344 aa16.65■□□□□ 0.26
SNX21-202ENST00000344780 CHMP5Q9NZZ3 219 aa16.65■□□□□ 0.26
SNX21-202ENST00000344780 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.25
SNX21-202ENST00000344780 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
SNX21-202ENST00000344780 PPIP5K1Q6PFW1 1433 aa16.63■□□□□ 0.25
SNX21-202ENST00000344780 CCDC61Q9Y6R9 512 aa16.63■□□□□ 0.25
SNX21-202ENST00000344780 NUCB1Q02818 461 aa16.63■□□□□ 0.25
SNX21-202ENST00000344780 TWISTNBQ3B726 338 aaPredicted RBP16.63■□□□□ 0.25
SNX21-202ENST00000344780 C14orf37Q86TY3 774 aa16.63■□□□□ 0.25
SNX21-202ENST00000344780 ARHGAP31Q2M1Z3 1444 aa16.62■□□□□ 0.25
SNX21-202ENST00000344780 GOLGA6L3A6NEY3 463 aa16.62■□□□□ 0.25
SNX21-202ENST00000344780 NECTIN2Q92692 538 aa16.62■□□□□ 0.25
SNX21-202ENST00000344780 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
SNX21-202ENST00000344780 TRAK2O60296 914 aa16.62■□□□□ 0.25
SNX21-202ENST00000344780 VAMP4O75379 141 aa16.62■□□□□ 0.25
SNX21-202ENST00000344780 HSP90AB2PQ58FF8 381 aa16.62■□□□□ 0.25
SNX21-202ENST00000344780 ALKQ9UM73 1620 aa16.62■□□□□ 0.25
SNX21-202ENST00000344780 ZHX1Q9UKY1 873 aaPredicted RBP16.61■□□□□ 0.25
SNX21-202ENST00000344780 RRP9O43818 475 aaKnown RBP16.61■□□□□ 0.25
SNX21-202ENST00000344780 IL13P35225 146 aa16.61■□□□□ 0.25
SNX21-202ENST00000344780 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
SNX21-202ENST00000344780 IL16Q14005 1332 aa16.61■□□□□ 0.25
SNX21-202ENST00000344780 GNAI1P63096 354 aa16.6■□□□□ 0.25
SNX21-202ENST00000344780 L1TD1Q5T7N2 865 aaKnown RBP16.6■□□□□ 0.25
SNX21-202ENST00000344780 ZBTB7BO15156 539 aaPredicted RBP16.59■□□□□ 0.25
SNX21-202ENST00000344780 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
SNX21-202ENST00000344780 PRR36Q9H6K5 1346 aa16.59■□□□□ 0.25
SNX21-202ENST00000344780 ZMYM3Q14202 1370 aa16.59■□□□□ 0.25
SNX21-202ENST00000344780 FOXO3O43524 673 aa16.59■□□□□ 0.25
SNX21-202ENST00000344780 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
SNX21-202ENST00000344780 XRCC6P12956 609 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNX21-202ENST00000344780 RICTORQ6R327 1708 aa16.58■□□□□ 0.25
SNX21-202ENST00000344780 MRPL50Q8N5N7 158 aaKnown RBP16.58■□□□□ 0.24
SNX21-202ENST00000344780 PREX1Q8TCU6 1659 aa16.58■□□□□ 0.24
SNX21-202ENST00000344780 LTKP29376 864 aa16.58■□□□□ 0.24
SNX21-202ENST00000344780 ARHGEF40Q8TER5 1519 aa16.57■□□□□ 0.24
SNX21-202ENST00000344780 SLC4A10Q6U841 1118 aa16.57■□□□□ 0.24
SNX21-202ENST00000344780 A2ML1A8K2U0 1454 aa16.57■□□□□ 0.24
SNX21-202ENST00000344780 ACEP12821 1306 aa16.56■□□□□ 0.24
SNX21-202ENST00000344780 VIRMAQ69YN4 1812 aaKnown RBP16.56■□□□□ 0.24
SNX21-202ENST00000344780 ZFYVE9O95405 1425 aa16.56■□□□□ 0.24
SNX21-202ENST00000344780 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
SNX21-202ENST00000344780 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
SNX21-202ENST00000344780 C16orf71Q8IYS4 520 aaPredicted RBP16.56■□□□□ 0.24
SNX21-202ENST00000344780 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
SNX21-202ENST00000344780 NGDNQ8NEJ9 315 aaKnown RBP16.55■□□□□ 0.24
SNX21-202ENST00000344780 FAM13BQ9NYF5 915 aa16.55■□□□□ 0.24
SNX21-202ENST00000344780 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
SNX21-202ENST00000344780 CD2BP2O95400 341 aaKnown RBP16.55■□□□□ 0.24
SNX21-202ENST00000344780 SIRT2Q8IXJ6 389 aa16.55■□□□□ 0.24
SNX21-202ENST00000344780 PDE4CQ08493 712 aa16.54■□□□□ 0.24
SNX21-202ENST00000344780 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
SNX21-202ENST00000344780 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
SNX21-202ENST00000344780 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
SNX21-202ENST00000344780 GCC1Q96CN9 775 aa16.54■□□□□ 0.24
SNX21-202ENST00000344780 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX21-202ENST00000344780 CLTCQ00610 1675 aaKnown RBP16.53■□□□□ 0.24
SNX21-202ENST00000344780 SMARCA5O60264 1052 aaPredicted RBP16.53■□□□□ 0.24
SNX21-202ENST00000344780 BMP2KLQ5H9B9 411 aa16.53■□□□□ 0.24
SNX21-202ENST00000344780 TNPO1Q92973 898 aaKnown RBP16.53■□□□□ 0.24
SNX21-202ENST00000344780 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
SNX21-202ENST00000344780 IFT57Q9NWB7 429 aa16.52■□□□□ 0.24
SNX21-202ENST00000344780 PNPLA6Q8IY17 1366 aa16.52■□□□□ 0.23
SNX21-202ENST00000344780 F6X3S4 739 aa16.52■□□□□ 0.23
SNX21-202ENST00000344780 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.23
SNX21-202ENST00000344780 ADGRB2O60241 1585 aa16.51■□□□□ 0.23
SNX21-202ENST00000344780 ROBO2Q9HCK4 1378 aa16.51■□□□□ 0.23
SNX21-202ENST00000344780 NCLP19338 710 aaKnown RBP16.51■□□□□ 0.23
SNX21-202ENST00000344780 HDGFP51858 240 aaKnown RBP16.51■□□□□ 0.23
SNX21-202ENST00000344780 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
SNX21-202ENST00000344780 USP32Q8NFA0 1604 aa16.51■□□□□ 0.23
SNX21-202ENST00000344780 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
SNX21-202ENST00000344780 API5Q9BZZ5 524 aaKnown RBP16.5■□□□□ 0.23
SNX21-202ENST00000344780 TTC21BQ7Z4L5 1316 aa16.5■□□□□ 0.23
SNX21-202ENST00000344780 CPS1P31327 1500 aa16.5■□□□□ 0.23
SNX21-202ENST00000344780 AMPHP49418 695 aa16.5■□□□□ 0.23
SNX21-202ENST00000344780 ZNF428Q96B54 188 aa16.5■□□□□ 0.23
SNX21-202ENST00000344780 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
SNX21-202ENST00000344780 FGD1P98174 961 aa16.5■□□□□ 0.23
SNX21-202ENST00000344780 LMOD3Q0VAK6 560 aa16.5■□□□□ 0.23
SNX21-202ENST00000344780 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
SNX21-202ENST00000344780 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
SNX21-202ENST00000344780 RBM25P49756 843 aaKnown RBP16.49■□□□□ 0.23
SNX21-202ENST00000344780 MAP2P11137 1827 aaKnown RBP16.49■□□□□ 0.23
SNX21-202ENST00000344780 FAM135BQ49AJ0 1406 aa16.49■□□□□ 0.23
SNX21-202ENST00000344780 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
SNX21-202ENST00000344780 GBP4Q96PP9 640 aa16.48■□□□□ 0.23
SNX21-202ENST00000344780 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
SNX21-202ENST00000344780 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
SNX21-202ENST00000344780 CDC45O75419 566 aa16.47■□□□□ 0.23
SNX21-202ENST00000344780 SSFA2P28290 1259 aa16.47■□□□□ 0.23
SNX21-202ENST00000344780 FOXD4L5Q5VV16 416 aaPredicted RBP16.47■□□□□ 0.23
SNX21-202ENST00000344780 FOXD4L4Q8WXT5 416 aaPredicted RBP16.47■□□□□ 0.23
SNX21-202ENST00000344780 TNRQ92752 1358 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms