RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CFAP45Q9UL16 551 aa21.42■■□□□ 1.02
SMC4-201ENST00000344722 DHX16O60231 1041 aaKnown RBP21.42■■□□□ 1.02
SMC4-201ENST00000344722 BAG4O95429 457 aaKnown RBP21.42■■□□□ 1.02
SMC4-201ENST00000344722 CEBPZQ03701 1054 aaKnown RBP21.42■■□□□ 1.02
SMC4-201ENST00000344722 JMYQ8N9B5 988 aa21.42■■□□□ 1.02
SMC4-201ENST00000344722 FILIP1Q7Z7B0 1213 aa21.41■■□□□ 1.02
SMC4-201ENST00000344722 ERC1Q8IUD2 1116 aa21.41■■□□□ 1.02
SMC4-201ENST00000344722 CABP2Q9NPB3 220 aa21.41■■□□□ 1.02
SMC4-201ENST00000344722 PIP4K2AP48426 406 aaPredicted RBP21.41■■□□□ 1.02
SMC4-201ENST00000344722 DUSP27Q5VZP5 1158 aa21.41■■□□□ 1.02
SMC4-201ENST00000344722 SUPT6HQ7KZ85 1726 aaKnown RBP21.41■■□□□ 1.02
SMC4-201ENST00000344722 DACH1Q9UI36 760 aa21.41■■□□□ 1.02
SMC4-201ENST00000344722 PDRG1Q9NUG6 133 aa21.4■■□□□ 1.02
SMC4-201ENST00000344722 USP25Q9UHP3 1055 aa21.4■■□□□ 1.02
SMC4-201ENST00000344722 DAPK1P53355 1430 aa21.4■■□□□ 1.02
SMC4-201ENST00000344722 ME1P48163 572 aa21.39■■□□□ 1.02
SMC4-201ENST00000344722 PTPRGP23470 1445 aa21.39■■□□□ 1.02
SMC4-201ENST00000344722 PANK2Q9BZ23 570 aa21.39■■□□□ 1.01
SMC4-201ENST00000344722 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
SMC4-201ENST00000344722 NUTM2FA1L443 756 aa21.39■■□□□ 1.01
SMC4-201ENST00000344722 PPFIBP1Q86W92 1011 aa21.39■■□□□ 1.01
SMC4-201ENST00000344722 UPF3BQ9BZI7 483 aaKnown RBP21.39■■□□□ 1.01
SMC4-201ENST00000344722 TNNT1P13805 278 aa21.39■■□□□ 1.01
SMC4-201ENST00000344722 SMTNL1A8MU46 457 aa21.38■■□□□ 1.01
SMC4-201ENST00000344722 ZSCAN23Q3MJ62 389 aa21.38■■□□□ 1.01
SMC4-201ENST00000344722 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
SMC4-201ENST00000344722 NEMFO60524 1076 aa21.38■■□□□ 1.01
SMC4-201ENST00000344722 CFAP70Q5T0N1 1121 aa21.38■■□□□ 1.01
SMC4-201ENST00000344722 C8orf34Q49A92 452 aa21.37■■□□□ 1.01
SMC4-201ENST00000344722 HS1BP3Q53T59 392 aa21.37■■□□□ 1.01
SMC4-201ENST00000344722 MYO6Q9UM54 1294 aa21.37■■□□□ 1.01
SMC4-201ENST00000344722 ANKRD30BQ9BXX2 1392 aa21.37■■□□□ 1.01
SMC4-201ENST00000344722 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
SMC4-201ENST00000344722 EID1Q9Y6B2 187 aa21.37■■□□□ 1.01
SMC4-201ENST00000344722 MAPK8IP2Q13387 824 aaPredicted RBP21.36■■□□□ 1.01
SMC4-201ENST00000344722 GBP3Q9H0R5 595 aa21.36■■□□□ 1.01
SMC4-201ENST00000344722 BRMS1Q9HCU9 246 aa21.36■■□□□ 1.01
SMC4-201ENST00000344722 XBP1P17861 261 aa21.36■■□□□ 1.01
SMC4-201ENST00000344722 GTPBP4Q9BZE4 634 aaKnown RBP21.36■■□□□ 1.01
SMC4-201ENST00000344722 HSP90AB3PQ58FF7 597 aa21.36■■□□□ 1.01
SMC4-201ENST00000344722 LRSAM1Q6UWE0 723 aa21.36■■□□□ 1.01
SMC4-201ENST00000344722 FAM177A1Q8N128 213 aaPredicted RBP21.36■■□□□ 1.01
SMC4-201ENST00000344722 OFD1O75665 1012 aa21.35■■□□□ 1.01
SMC4-201ENST00000344722 ADCY5O95622 1261 aa21.35■■□□□ 1.01
SMC4-201ENST00000344722 CCDC102AQ96A19 550 aa21.35■■□□□ 1.01
SMC4-201ENST00000344722 IGHDP01880 384 aa21.35■■□□□ 1.01
SMC4-201ENST00000344722 SKIDA1Q1XH10 827 aa21.35■■□□□ 1.01
SMC4-201ENST00000344722 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
SMC4-201ENST00000344722 SLC4A2P04920 1241 aa21.34■■□□□ 1.01
SMC4-201ENST00000344722 GPRASP1Q5JY77 1395 aa21.34■■□□□ 1.01
SMC4-201ENST00000344722 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 SPDYE4A6NLX3 237 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 ALDH1L2Q3SY69 923 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 BMP2KLQ5H9B9 411 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 TIGD1Q96MW7 591 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 CLIP2Q9UDT6 1046 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 ZKSCAN5Q9Y2L8 839 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 GOLGA6L10A6NI86 522 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 SFPQP23246 707 aaKnown RBP eCLIP21.33■■□□□ 1.01
SMC4-201ENST00000344722 STK3Q13188 491 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 WASHC4Q2M389 1173 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 BLOC1S2Q6QNY1 142 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 PAXBP1Q9Y5B6 917 aa21.33■■□□□ 1.01
SMC4-201ENST00000344722 ZSCAN12O43309 604 aa21.33■■□□□ 1
SMC4-201ENST00000344722 NOL10Q9BSC4 688 aaKnown RBP21.33■■□□□ 1
SMC4-201ENST00000344722 CCDC94Q9BW85 323 aaPredicted RBP21.33■■□□□ 1
SMC4-201ENST00000344722 JAKMIP1Q96N16 626 aaKnown RBP21.32■■□□□ 1
SMC4-201ENST00000344722 IQCEQ6IPM2 695 aa21.32■■□□□ 1
SMC4-201ENST00000344722 NEUROD6Q96NK8 337 aa21.32■■□□□ 1
SMC4-201ENST00000344722 ZNHIT6Q9NWK9 470 aaKnown RBP21.32■■□□□ 1
SMC4-201ENST00000344722 CAMK4Q16566 473 aa21.32■■□□□ 1
SMC4-201ENST00000344722 VPS53Q5VIR6 699 aa21.32■■□□□ 1
SMC4-201ENST00000344722 SCAND2PQ9GZW5 306 aaPredicted RBP21.32■■□□□ 1
SMC4-201ENST00000344722 C16orf45Q96MC5 204 aaPredicted RBP21.31■■□□□ 1
SMC4-201ENST00000344722 SLC12A5Q9H2X9 1139 aa21.31■■□□□ 1
SMC4-201ENST00000344722 MAGEC2Q9UBF1 373 aaPredicted RBP21.31■■□□□ 1
SMC4-201ENST00000344722 BRPF1P55201 1214 aaPredicted RBP21.31■■□□□ 1
SMC4-201ENST00000344722 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
SMC4-201ENST00000344722 BMS1Q14692 1282 aaKnown RBP21.3■■□□□ 1
SMC4-201ENST00000344722 TMEM132EQ6IEE7 984 aa21.3■■□□□ 1
SMC4-201ENST00000344722 HECW1Q76N89 1606 aa21.3■■□□□ 1
SMC4-201ENST00000344722 RIC3Q7Z5B4 369 aa21.29■■□□□ 1
SMC4-201ENST00000344722 ANO10Q9NW15 660 aa21.29■■□□□ 1
SMC4-201ENST00000344722 NOLC1Q14978 699 aaKnown RBP eCLIP21.29■■□□□ 14e-16■■■■■ 30.2
SMC4-201ENST00000344722 SMAP1Q8IYB5 467 aaPredicted RBP21.29■■□□□ 1
SMC4-201ENST00000344722 SNX21Q969T3 373 aa21.29■■□□□ 1
SMC4-201ENST00000344722 TMPOP42166 694 aaKnown RBP21.29■■□□□ 1
SMC4-201ENST00000344722 MAPKBP1O60336 1514 aa21.29■■□□□ 1
SMC4-201ENST00000344722 KRT222Q8N1A0 295 aa21.28■■□□□ 1
SMC4-201ENST00000344722 RBM27Q9P2N5 1060 aaKnown RBP21.28■■□□□ 1
SMC4-201ENST00000344722 GOLGA6L7A0A1B0GV03 622 aa21.28■■□□□ 1
SMC4-201ENST00000344722 SSH1Q8WYL5 1049 aa21.28■■□□□ 1
SMC4-201ENST00000344722 KRT32Q14532 448 aa21.28■■□□□ 1
SMC4-201ENST00000344722 FAM107BQ9H098 131 aa21.28■■□□□ 1
SMC4-201ENST00000344722 AMOTL1Q8IY63 956 aa21.27■■□□□ 1
SMC4-201ENST00000344722 ABCC11Q96J66 1382 aa21.27■■□□□ 1
SMC4-201ENST00000344722 GTF2F1P35269 517 aaKnown RBP eCLIP21.27■■□□□ 18e-49■■■■■ 172.1
SMC4-201ENST00000344722 RRAGDQ9NQL2 400 aaPredicted RBP21.27■■□□□ 1
SMC4-201ENST00000344722 CASTP20810 708 aaKnown RBP21.27■■□□□ 1
SMC4-201ENST00000344722 TBC1D9Q6ZT07 1266 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms