RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TRIM27P14373 513 aa13.14□□□□□ -0.31
RPL28-201ENST00000344063 FAM184AQ8NB25 1140 aa13.13□□□□□ -0.31
RPL28-201ENST00000344063 FIBPO43427 364 aa13.13□□□□□ -0.31
RPL28-201ENST00000344063 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
RPL28-201ENST00000344063 IL16Q14005 1332 aa13.13□□□□□ -0.31
RPL28-201ENST00000344063 KDM5BQ9UGL1 1544 aa13.12□□□□□ -0.31
RPL28-201ENST00000344063 FANCAO15360 1455 aa13.12□□□□□ -0.31
RPL28-201ENST00000344063 G3BP1Q13283 466 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPL28-201ENST00000344063 TXNDC2Q86VQ3 553 aa13.12□□□□□ -0.31
RPL28-201ENST00000344063 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
RPL28-201ENST00000344063 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
RPL28-201ENST00000344063 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.12□□□□□ -0.31
RPL28-201ENST00000344063 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
RPL28-201ENST00000344063 NLRP6P59044 892 aa13.11□□□□□ -0.31
RPL28-201ENST00000344063 SF3A1Q15459 793 aaKnown RBP13.11□□□□□ -0.31
RPL28-201ENST00000344063 CNTROBQ8N137 903 aa13.11□□□□□ -0.31
RPL28-201ENST00000344063 NPC1L1Q9UHC9 1359 aa13.11□□□□□ -0.31
RPL28-201ENST00000344063 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
RPL28-201ENST00000344063 CCDC34Q96HJ3 373 aa13.1□□□□□ -0.31
RPL28-201ENST00000344063 PCDHB15Q9Y5E8 787 aa13.1□□□□□ -0.31
RPL28-201ENST00000344063 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
RPL28-201ENST00000344063 A2MP01023 1474 aa13.1□□□□□ -0.31
RPL28-201ENST00000344063 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
RPL28-201ENST00000344063 PBRM1Q86U86 1689 aa13.1□□□□□ -0.31
RPL28-201ENST00000344063 FOSBP53539 338 aa13.1□□□□□ -0.31
RPL28-201ENST00000344063 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
RPL28-201ENST00000344063 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
RPL28-201ENST00000344063 ANKRD36BQ8N2N9 1353 aa13.1□□□□□ -0.31
RPL28-201ENST00000344063 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
RPL28-201ENST00000344063 CD109Q6YHK3 1445 aa13.09□□□□□ -0.31
RPL28-201ENST00000344063 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
RPL28-201ENST00000344063 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
RPL28-201ENST00000344063 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
RPL28-201ENST00000344063 BMP2KLQ5H9B9 411 aa13.09□□□□□ -0.31
RPL28-201ENST00000344063 TPD52L1Q16890 204 aaPredicted RBP13.08□□□□□ -0.31
RPL28-201ENST00000344063 LRRFIP1Q32MZ4 808 aaKnown RBP13.08□□□□□ -0.31
RPL28-201ENST00000344063 HOMER1Q86YM7 354 aa13.08□□□□□ -0.31
RPL28-201ENST00000344063 TRIM5Q9C035 493 aa13.08□□□□□ -0.31
RPL28-201ENST00000344063 SRCIN1Q9C0H9 1055 aa13.08□□□□□ -0.31
RPL28-201ENST00000344063 ZMYM4Q5VZL5 1548 aa13.08□□□□□ -0.32
RPL28-201ENST00000344063 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
RPL28-201ENST00000344063 LETM1O95202 739 aaPredicted RBP13.08□□□□□ -0.32
RPL28-201ENST00000344063 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.32
RPL28-201ENST00000344063 IDI1Q13907 227 aa13.07□□□□□ -0.32
RPL28-201ENST00000344063 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
RPL28-201ENST00000344063 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
RPL28-201ENST00000344063 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
RPL28-201ENST00000344063 PSME1Q06323 249 aa13.07□□□□□ -0.32
RPL28-201ENST00000344063 ADGBQ8N7X0 1667 aa13.06□□□□□ -0.32
RPL28-201ENST00000344063 CREBRFQ8IUR6 639 aa13.06□□□□□ -0.32
RPL28-201ENST00000344063 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
RPL28-201ENST00000344063 PDCL2Q8N4E4 241 aa13.06□□□□□ -0.32
RPL28-201ENST00000344063 NUDT16Q96DE0 195 aaKnown RBP13.06□□□□□ -0.32
RPL28-201ENST00000344063 SASS6Q6UVJ0 657 aa13.06□□□□□ -0.32
RPL28-201ENST00000344063 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
RPL28-201ENST00000344063 PSMA5P28066 241 aa13.06□□□□□ -0.32
RPL28-201ENST00000344063 HDGFL1Q5TGJ6 251 aa13.06□□□□□ -0.32
RPL28-201ENST00000344063 ERICH4A6NGS2 130 aa13.05□□□□□ -0.32
RPL28-201ENST00000344063 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
RPL28-201ENST00000344063 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
RPL28-201ENST00000344063 WDR33Q9C0J8 1336 aaKnown RBP13.05□□□□□ -0.32
RPL28-201ENST00000344063 BAG4O95429 457 aaKnown RBP13.05□□□□□ -0.32
RPL28-201ENST00000344063 KDM6BO15054 1643 aa13.05□□□□□ -0.32
RPL28-201ENST00000344063 KDM2BQ8NHM5 1336 aa13.05□□□□□ -0.32
RPL28-201ENST00000344063 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
RPL28-201ENST00000344063 PDCP20941 246 aa13.05□□□□□ -0.32
RPL28-201ENST00000344063 EIF4G3O43432 1585 aaKnown RBP13.05□□□□□ -0.32
RPL28-201ENST00000344063 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
RPL28-201ENST00000344063 CARD14Q9BXL6 1004 aa13.04□□□□□ -0.32
RPL28-201ENST00000344063 HIP1O00291 1037 aa13.04□□□□□ -0.32
RPL28-201ENST00000344063 TPM3P06753 285 aa13.04□□□□□ -0.32
RPL28-201ENST00000344063 ARHGAP45Q92619 1136 aa13.04□□□□□ -0.32
RPL28-201ENST00000344063 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
RPL28-201ENST00000344063 ERC1Q8IUD2 1116 aa13.04□□□□□ -0.32
RPL28-201ENST00000344063 CPLX2Q6PUV4 134 aaKnown RBP13.03□□□□□ -0.32
RPL28-201ENST00000344063 IGSF3O75054 1194 aa13.03□□□□□ -0.32
RPL28-201ENST00000344063 GOLGA6L1Q8N7Z2 621 aa13.03□□□□□ -0.32
RPL28-201ENST00000344063 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
RPL28-201ENST00000344063 WAPLQ7Z5K2 1190 aa13.03□□□□□ -0.32
RPL28-201ENST00000344063 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
RPL28-201ENST00000344063 NUCB1Q02818 461 aa13.02□□□□□ -0.32
RPL28-201ENST00000344063 NUTM2GQ5VZR2 741 aa13.02□□□□□ -0.32
RPL28-201ENST00000344063 TRERF1Q96PN7 1200 aa13.02□□□□□ -0.32
RPL28-201ENST00000344063 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.32
RPL28-201ENST00000344063 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
RPL28-201ENST00000344063 UPF3BQ9BZI7 483 aaKnown RBP13.02□□□□□ -0.33
RPL28-201ENST00000344063 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.33
RPL28-201ENST00000344063 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 TEX35Q5T0J7 233 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 NME9Q86XW9 330 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 PLEKHO1Q53GL0 409 aaPredicted RBP13.01□□□□□ -0.33
RPL28-201ENST00000344063 FSD1Q9BTV5 496 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 KDM5CP41229 1560 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 RLBP1P12271 317 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 CCDC73Q6ZRK6 1079 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
RPL28-201ENST00000344063 CCDC66A2RUB6 948 aa13□□□□□ -0.33
RPL28-201ENST00000344063 ZSCAN23Q3MJ62 389 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms