RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 PLEKHO1Q53GL0 409 aaPredicted RBP10.73□□□□□ -0.69
HMGCR-202ENST00000343975 FBLN1P23142 703 aa10.72□□□□□ -0.69
HMGCR-202ENST00000343975 SULT6B1Q6IMI4 303 aa10.72□□□□□ -0.69
HMGCR-202ENST00000343975 TRPC5Q9UL62 973 aaPredicted RBP10.72□□□□□ -0.69
HMGCR-202ENST00000343975 PDE3BQ13370 1112 aa10.72□□□□□ -0.69
HMGCR-202ENST00000343975 SPG7Q9UQ90 795 aa10.72□□□□□ -0.69
HMGCR-202ENST00000343975 HMOX1P09601 288 aa10.71□□□□□ -0.69
HMGCR-202ENST00000343975 HNRNPUQ00839 825 aaKnown RBP eCLIP10.71□□□□□ -0.69
HMGCR-202ENST00000343975 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
HMGCR-202ENST00000343975 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
HMGCR-202ENST00000343975 PXDNQ92626 1479 aa10.71□□□□□ -0.69
HMGCR-202ENST00000343975 CD163L1Q9NR16 1453 aa10.71□□□□□ -0.69
HMGCR-202ENST00000343975 PHLPP1O60346 1717 aa10.71□□□□□ -0.69
HMGCR-202ENST00000343975 OVOS2A0A0J9YW53 1432 aa10.71□□□□□ -0.7
HMGCR-202ENST00000343975 OVOS2Q6IE36 1432 aa10.71□□□□□ -0.7
HMGCR-202ENST00000343975 CALD1Q05682 793 aaKnown RBP10.71□□□□□ -0.7
HMGCR-202ENST00000343975 GAS2L2Q8NHY3 880 aa10.71□□□□□ -0.7
HMGCR-202ENST00000343975 AHDC1Q5TGY3 1603 aaPredicted RBP10.7□□□□□ -0.7
HMGCR-202ENST00000343975 INSRP06213 1382 aa10.7□□□□□ -0.7
HMGCR-202ENST00000343975 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
HMGCR-202ENST00000343975 UNC5CLQ8IV45 518 aa10.7□□□□□ -0.7
HMGCR-202ENST00000343975 USP32Q8NFA0 1604 aa10.7□□□□□ -0.7
HMGCR-202ENST00000343975 AFF2P51816 1311 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 FCHSD2O94868 740 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 EIF4A2Q14240 407 aaKnown RBP10.69□□□□□ -0.7
HMGCR-202ENST00000343975 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
HMGCR-202ENST00000343975 SSH2Q76I76 1423 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 RGPD8O14715 1765 aaPredicted RBP10.69□□□□□ -0.7
HMGCR-202ENST00000343975 CPDO75976 1380 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 FAM83GA6ND36 823 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 EXOC5O00471 708 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 PRKAR2BP31323 418 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 AMOTQ4VCS5 1084 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 RUNDC1Q96C34 613 aa10.69□□□□□ -0.7
HMGCR-202ENST00000343975 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
HMGCR-202ENST00000343975 WDR17Q8IZU2 1322 aa10.68□□□□□ -0.7
HMGCR-202ENST00000343975 TOPAZ1Q8N9V7 1692 aa10.68□□□□□ -0.7
HMGCR-202ENST00000343975 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
HMGCR-202ENST00000343975 TCP11L2Q8N4U5 519 aa10.68□□□□□ -0.7
HMGCR-202ENST00000343975 NGEFQ8N5V2 710 aa10.68□□□□□ -0.7
HMGCR-202ENST00000343975 QTRT2Q9H974 415 aaKnown RBP10.68□□□□□ -0.7
HMGCR-202ENST00000343975 IL2RBP14784 551 aa10.68□□□□□ -0.7
HMGCR-202ENST00000343975 NPM2Q86SE8 214 aaKnown RBP10.67□□□□□ -0.7
HMGCR-202ENST00000343975 ERBB3P21860 1342 aa10.67□□□□□ -0.7
HMGCR-202ENST00000343975 ZNF530Q6P9A1 599 aaPredicted RBP10.67□□□□□ -0.7
HMGCR-202ENST00000343975 USHBP1Q8N6Y0 703 aa10.67□□□□□ -0.7
HMGCR-202ENST00000343975 TEFQ10587 303 aa10.66□□□□□ -0.7
HMGCR-202ENST00000343975 CCDC146Q8IYE0 955 aa10.66□□□□□ -0.7
HMGCR-202ENST00000343975 CARD10Q9BWT7 1032 aa10.66□□□□□ -0.7
HMGCR-202ENST00000343975 DDX54Q8TDD1 881 aaKnown RBP10.66□□□□□ -0.7
HMGCR-202ENST00000343975 XIRP1Q702N8 1843 aaKnown RBP10.66□□□□□ -0.7
HMGCR-202ENST00000343975 CDK12Q9NYV4 1490 aaPredicted RBP10.66□□□□□ -0.7
HMGCR-202ENST00000343975 DDB1Q16531 1140 aa10.66□□□□□ -0.7
HMGCR-202ENST00000343975 EYA1Q99502 592 aa10.66□□□□□ -0.7
HMGCR-202ENST00000343975 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
HMGCR-202ENST00000343975 LARP1Q6PKG0 1096 aaKnown RBP10.65□□□□□ -0.7
HMGCR-202ENST00000343975 ADAMTS8Q9UP79 889 aa10.65□□□□□ -0.7
HMGCR-202ENST00000343975 MYOM1P52179 1685 aa10.65□□□□□ -0.7
HMGCR-202ENST00000343975 AKAP12Q02952 1782 aa10.65□□□□□ -0.7
HMGCR-202ENST00000343975 RXRBP28702 533 aa10.65□□□□□ -0.7
HMGCR-202ENST00000343975 THRAP3Q9Y2W1 955 aaKnown RBP10.65□□□□□ -0.7
HMGCR-202ENST00000343975 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
HMGCR-202ENST00000343975 ZCRB1Q8TBF4 217 aaKnown RBP10.64□□□□□ -0.71
HMGCR-202ENST00000343975 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
HMGCR-202ENST00000343975 IL13P35225 146 aa10.64□□□□□ -0.71
HMGCR-202ENST00000343975 SF3B2Q13435 895 aaKnown RBP10.64□□□□□ -0.71
HMGCR-202ENST00000343975 SYTL4Q96C24 671 aaPredicted RBP10.64□□□□□ -0.71
HMGCR-202ENST00000343975 RBM6P78332 1123 aaKnown RBP10.63□□□□□ -0.71
HMGCR-202ENST00000343975 FAM98CQ17RN3 349 aaKnown RBP10.63□□□□□ -0.71
HMGCR-202ENST00000343975 NHSL1Q5SYE7 1610 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 KIF20BQ96Q89 1820 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 RIPK4P57078 832 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 VPS72Q15906 364 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 PNISRQ8TF01 805 aaKnown RBP10.63□□□□□ -0.71
HMGCR-202ENST00000343975 CHMP4AQ9BY43 222 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 APAF1O14727 1248 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 NBPF6Q5VWK0 638 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 IFNL2Q8IZJ0 200 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 NBPF4Q96M43 638 aa10.63□□□□□ -0.71
HMGCR-202ENST00000343975 MED1Q15648 1581 aaPredicted RBP10.62□□□□□ -0.71
HMGCR-202ENST00000343975 CRB1P82279 1406 aa10.62□□□□□ -0.71
HMGCR-202ENST00000343975 AXIN2Q9Y2T1 843 aa10.62□□□□□ -0.71
HMGCR-202ENST00000343975 HMGB2P26583 209 aaKnown RBP10.61□□□□□ -0.71
HMGCR-202ENST00000343975 GJD4Q96KN9 370 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-202ENST00000343975 FNBP4Q8N3X1 1017 aaPredicted RBP10.61□□□□□ -0.71
HMGCR-202ENST00000343975 RRP7AQ9Y3A4 280 aaKnown RBP10.61□□□□□ -0.71
HMGCR-202ENST00000343975 PCDH11XQ9BZA7 1347 aa10.61□□□□□ -0.71
HMGCR-202ENST00000343975 PCDH11YQ9BZA8 1340 aa10.61□□□□□ -0.71
HMGCR-202ENST00000343975 NFE2L2Q16236 605 aa10.61□□□□□ -0.71
HMGCR-202ENST00000343975 TTC5Q8N0Z6 440 aa10.61□□□□□ -0.71
HMGCR-202ENST00000343975 IGSF1Q8N6C5 1336 aa10.6□□□□□ -0.71
HMGCR-202ENST00000343975 COL16A1Q07092 1604 aaPredicted RBP10.6□□□□□ -0.71
HMGCR-202ENST00000343975 GNAT3A8MTJ3 354 aa10.6□□□□□ -0.71
HMGCR-202ENST00000343975 AEBP1Q8IUX7 1158 aa10.6□□□□□ -0.71
HMGCR-202ENST00000343975 SLIT3O75094 1523 aa10.6□□□□□ -0.71
HMGCR-202ENST00000343975 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
HMGCR-202ENST00000343975 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
HMGCR-202ENST00000343975 CABP4P57796 275 aa10.59□□□□□ -0.71
HMGCR-202ENST00000343975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.719e-9■□□□□ 9.6
HMGCR-202ENST00000343975 SENP3-EIF4A1A0A087X0R7 540 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms