RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
CCDC18-201ENST00000343253 ZHX1Q9UKY1 873 aaPredicted RBP12.79□□□□□ -0.36
CCDC18-201ENST00000343253 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
CCDC18-201ENST00000343253 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
CCDC18-201ENST00000343253 HNRNPMP52272 730 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC18-201ENST00000343253 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
CCDC18-201ENST00000343253 RBM33Q96EV2 1170 aaKnown RBP12.78□□□□□ -0.36
CCDC18-201ENST00000343253 SMG6Q86US8 1419 aaKnown RBP12.78□□□□□ -0.36
CCDC18-201ENST00000343253 BMS1Q14692 1282 aaKnown RBP12.78□□□□□ -0.36
CCDC18-201ENST00000343253 ERC1Q8IUD2 1116 aa12.78□□□□□ -0.36
CCDC18-201ENST00000343253 CDK5RAP3Q96JB5 506 aa12.78□□□□□ -0.36
CCDC18-201ENST00000343253 RAD21O60216 631 aa12.78□□□□□ -0.36
CCDC18-201ENST00000343253 IMMTQ16891 758 aaKnown RBP12.78□□□□□ -0.36
CCDC18-201ENST00000343253 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
CCDC18-201ENST00000343253 GTF2F1P35269 517 aaKnown RBP eCLIP12.77□□□□□ -0.36
CCDC18-201ENST00000343253 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.36
CCDC18-201ENST00000343253 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
CCDC18-201ENST00000343253 CLCN1P35523 988 aa12.77□□□□□ -0.37
CCDC18-201ENST00000343253 NBPF1Q3BBV0 1214 aa12.77□□□□□ -0.37
CCDC18-201ENST00000343253 NECTIN2Q92692 538 aa12.77□□□□□ -0.37
CCDC18-201ENST00000343253 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.37
CCDC18-201ENST00000343253 GPATCH11Q8N954 259 aa12.77□□□□□ -0.37
CCDC18-201ENST00000343253 TAF4BQ92750 862 aa12.77□□□□□ -0.37
CCDC18-201ENST00000343253 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
CCDC18-201ENST00000343253 SRCIN1Q9C0H9 1055 aa12.77□□□□□ -0.37
CCDC18-201ENST00000343253 MSH5O43196 834 aa12.76□□□□□ -0.37
CCDC18-201ENST00000343253 TNNT1P13805 278 aa12.76□□□□□ -0.37
CCDC18-201ENST00000343253 MAP2K1Q02750 393 aaPredicted RBP12.76□□□□□ -0.37
CCDC18-201ENST00000343253 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
CCDC18-201ENST00000343253 TRIM22Q8IYM9 498 aa12.76□□□□□ -0.37
CCDC18-201ENST00000343253 PPP4R3BQ5MIZ7 849 aa12.76□□□□□ -0.37
CCDC18-201ENST00000343253 AKNAQ7Z591 1439 aa12.76□□□□□ -0.37
CCDC18-201ENST00000343253 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
CCDC18-201ENST00000343253 SMARCC1Q92922 1105 aaPredicted RBP12.76□□□□□ -0.37
CCDC18-201ENST00000343253 GOLGA6L10A0A0M3HER8 536 aa12.75□□□□□ -0.37
CCDC18-201ENST00000343253 KIF5CO60282 957 aa12.75□□□□□ -0.37
CCDC18-201ENST00000343253 TBC1D2BQ9UPU7 963 aa12.75□□□□□ -0.37
CCDC18-201ENST00000343253 GNAI2P04899 355 aa12.75□□□□□ -0.37
CCDC18-201ENST00000343253 BLOC1S2Q6QNY1 142 aa12.75□□□□□ -0.37
CCDC18-201ENST00000343253 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
CCDC18-201ENST00000343253 POLR3GO15318 223 aaPredicted RBP12.74□□□□□ -0.37
CCDC18-201ENST00000343253 ANO10Q9NW15 660 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 TRERF1Q96PN7 1200 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
CCDC18-201ENST00000343253 SCAND2PQ9GZW5 306 aaPredicted RBP12.74□□□□□ -0.37
CCDC18-201ENST00000343253 GBP2P32456 591 aaPredicted RBP12.74□□□□□ -0.37
CCDC18-201ENST00000343253 MNAT1P51948 309 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
CCDC18-201ENST00000343253 LUZP1Q86V48 1076 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 CCDC83Q8IWF9 413 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 KRT222Q8N1A0 295 aa12.74□□□□□ -0.37
CCDC18-201ENST00000343253 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
CCDC18-201ENST00000343253 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
CCDC18-201ENST00000343253 GSDMDP57764 484 aa12.73□□□□□ -0.37
CCDC18-201ENST00000343253 KRT32Q14532 448 aa12.73□□□□□ -0.37
CCDC18-201ENST00000343253 SMC1AQ14683 1233 aaKnown RBP12.73□□□□□ -0.37
CCDC18-201ENST00000343253 MVPQ14764 893 aaKnown RBP12.73□□□□□ -0.37
CCDC18-201ENST00000343253 CCDC91Q7Z6B0 441 aa12.73□□□□□ -0.37
CCDC18-201ENST00000343253 TICAM2Q86XR7 235 aa12.73□□□□□ -0.37
CCDC18-201ENST00000343253 KRT18P05783 430 aaKnown RBP12.72□□□□□ -0.37
CCDC18-201ENST00000343253 GOLGA6L9A6NEM1 432 aa12.72□□□□□ -0.37
CCDC18-201ENST00000343253 CDKL5O76039 1030 aa12.72□□□□□ -0.37
CCDC18-201ENST00000343253 CCDC175P0C221 793 aa12.72□□□□□ -0.37
CCDC18-201ENST00000343253 GTF2A1P52655 376 aaPredicted RBP12.72□□□□□ -0.37
CCDC18-201ENST00000343253 ATF7IPQ6VMQ6 1270 aa12.72□□□□□ -0.37
CCDC18-201ENST00000343253 PAXBP1Q9Y5B6 917 aa12.72□□□□□ -0.37
CCDC18-201ENST00000343253 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
CCDC18-201ENST00000343253 NOL7Q9UMY1 257 aaKnown RBP12.72□□□□□ -0.37
CCDC18-201ENST00000343253 NUTM2FA1L443 756 aa12.72□□□□□ -0.37
CCDC18-201ENST00000343253 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
CCDC18-201ENST00000343253 RNF187Q5TA31 235 aaPredicted RBP12.72□□□□□ -0.37
CCDC18-201ENST00000343253 NUTM2DQ5VT03 806 aaPredicted RBP12.72□□□□□ -0.37
CCDC18-201ENST00000343253 CTR9Q6PD62 1173 aa12.72□□□□□ -0.37
CCDC18-201ENST00000343253 CASQ1P31415 396 aa12.71□□□□□ -0.37
CCDC18-201ENST00000343253 DHX37Q8IY37 1157 aaKnown RBP12.71□□□□□ -0.37
CCDC18-201ENST00000343253 GTPBP4Q9BZE4 634 aaKnown RBP12.71□□□□□ -0.37
CCDC18-201ENST00000343253 CTAGE5O15320 804 aa12.71□□□□□ -0.37
CCDC18-201ENST00000343253 IVLP07476 585 aa12.71□□□□□ -0.37
CCDC18-201ENST00000343253 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
CCDC18-201ENST00000343253 TANGO6Q9C0B7 1094 aa12.71□□□□□ -0.37
CCDC18-201ENST00000343253 PAFAH1B1P43034 410 aa12.71□□□□□ -0.38
CCDC18-201ENST00000343253 UVSSAQ2YD98 709 aa12.71□□□□□ -0.38
CCDC18-201ENST00000343253 WDR63Q8IWG1 891 aa12.71□□□□□ -0.38
CCDC18-201ENST00000343253 MINK1Q8N4C8 1332 aaPredicted RBP12.71□□□□□ -0.38
CCDC18-201ENST00000343253 CAVIN2O95810 425 aa12.71□□□□□ -0.38
CCDC18-201ENST00000343253 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.38
CCDC18-201ENST00000343253 ZNF397Q8NF99 534 aaPredicted RBP12.71□□□□□ -0.38
CCDC18-201ENST00000343253 BCAR3O75815 825 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 MTHFSP49914 203 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
CCDC18-201ENST00000343253 PDRG1Q9NUG6 133 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 CLIP2Q9UDT6 1046 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 CADPSQ9ULU8 1353 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 PPP2R1AP30153 589 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 CCT4P50991 539 aaKnown RBP12.7□□□□□ -0.38
CCDC18-201ENST00000343253 LMAN1P49257 510 aa12.7□□□□□ -0.38
CCDC18-201ENST00000343253 SPA17Q15506 151 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms