RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 TESK2Q96S53 571 aa18.91■□□□□ 0.62
CARMIL3-201ENST00000342740 KIF6Q6ZMV9 814 aa18.91■□□□□ 0.62
CARMIL3-201ENST00000342740 TNRQ92752 1358 aa18.9■□□□□ 0.62
CARMIL3-201ENST00000342740 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
CARMIL3-201ENST00000342740 ALDH1L2Q3SY69 923 aa18.9■□□□□ 0.62
CARMIL3-201ENST00000342740 RALYLQ86SE5 291 aaKnown RBP18.89■□□□□ 0.61
CARMIL3-201ENST00000342740 USHBP1Q8N6Y0 703 aa18.89■□□□□ 0.61
CARMIL3-201ENST00000342740 TRIM29Q14134 588 aa18.89■□□□□ 0.61
CARMIL3-201ENST00000342740 DNAJC2Q99543 621 aaKnown RBP18.89■□□□□ 0.61
CARMIL3-201ENST00000342740 CLSTN1O94985 981 aa18.88■□□□□ 0.61
CARMIL3-201ENST00000342740 FBLN1P23142 703 aa18.88■□□□□ 0.61
CARMIL3-201ENST00000342740 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
CARMIL3-201ENST00000342740 SIL1Q9H173 461 aa18.88■□□□□ 0.61
CARMIL3-201ENST00000342740 SHANK2Q9UPX8 1470 aa18.88■□□□□ 0.61
CARMIL3-201ENST00000342740 ACEP12821 1306 aa18.88■□□□□ 0.61
CARMIL3-201ENST00000342740 FYB1O15117 783 aa18.88■□□□□ 0.61
CARMIL3-201ENST00000342740 ABCC10Q5T3U5 1492 aa18.87■□□□□ 0.61
CARMIL3-201ENST00000342740 RABEP1Q15276 862 aa18.87■□□□□ 0.61
CARMIL3-201ENST00000342740 MARCH6O60337 910 aa18.87■□□□□ 0.61
CARMIL3-201ENST00000342740 TAF7Q15545 349 aaPredicted RBP18.87■□□□□ 0.61
CARMIL3-201ENST00000342740 NFXL1Q6ZNB6 911 aa18.87■□□□□ 0.61
CARMIL3-201ENST00000342740 PSMA5P28066 241 aa18.86■□□□□ 0.61
CARMIL3-201ENST00000342740 CREBRFQ8IUR6 639 aa18.86■□□□□ 0.61
CARMIL3-201ENST00000342740 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
CARMIL3-201ENST00000342740 BECN2A8MW95 431 aa18.85■□□□□ 0.61
CARMIL3-201ENST00000342740 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
CARMIL3-201ENST00000342740 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
CARMIL3-201ENST00000342740 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
CARMIL3-201ENST00000342740 HIP1O00291 1037 aa18.85■□□□□ 0.61
CARMIL3-201ENST00000342740 IL1RAPL2Q9NP60 686 aa18.85■□□□□ 0.61
CARMIL3-201ENST00000342740 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
CARMIL3-201ENST00000342740 BICD2Q8TD16 824 aa18.84■□□□□ 0.61
CARMIL3-201ENST00000342740 ABCA5Q8WWZ7 1642 aa18.84■□□□□ 0.61
CARMIL3-201ENST00000342740 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
CARMIL3-201ENST00000342740 GOLGA6L19H0YKK7 550 aa18.84■□□□□ 0.61
CARMIL3-201ENST00000342740 UHRF1BP1LA0JNW5 1464 aa18.84■□□□□ 0.61
CARMIL3-201ENST00000342740 LRPPRCP42704 1394 aaKnown RBP18.84■□□□□ 0.61
CARMIL3-201ENST00000342740 ERICH2A1L162 156 aa18.83■□□□□ 0.61
CARMIL3-201ENST00000342740 SKAP1Q86WV1 359 aa18.83■□□□□ 0.61
CARMIL3-201ENST00000342740 EXOC6BQ9Y2D4 811 aa18.83■□□□□ 0.61
CARMIL3-201ENST00000342740 PZPP20742 1482 aa18.83■□□□□ 0.61
CARMIL3-201ENST00000342740 AMOTQ4VCS5 1084 aa18.83■□□□□ 0.61
CARMIL3-201ENST00000342740 MCM2P49736 904 aa18.83■□□□□ 0.6
CARMIL3-201ENST00000342740 TRIM27P14373 513 aa18.83■□□□□ 0.6
CARMIL3-201ENST00000342740 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.83■□□□□ 0.6
CARMIL3-201ENST00000342740 TEX14Q8IWB6 1497 aa18.82■□□□□ 0.6
CARMIL3-201ENST00000342740 TTC21BQ7Z4L5 1316 aa18.82■□□□□ 0.6
CARMIL3-201ENST00000342740 TBC1D2BQ9UPU7 963 aa18.82■□□□□ 0.6
CARMIL3-201ENST00000342740 CCDC27Q2M243 656 aa18.82■□□□□ 0.6
CARMIL3-201ENST00000342740 CNNM1Q9NRU3 951 aa18.82■□□□□ 0.6
CARMIL3-201ENST00000342740 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
CARMIL3-201ENST00000342740 FOSBP53539 338 aa18.81■□□□□ 0.6
CARMIL3-201ENST00000342740 MPRIPQ6WCQ1 1025 aa18.81■□□□□ 0.6
CARMIL3-201ENST00000342740 VPS53Q5VIR6 699 aa18.8■□□□□ 0.6
CARMIL3-201ENST00000342740 F6X3S4 739 aa18.8■□□□□ 0.6
CARMIL3-201ENST00000342740 MAP4K4O95819 1239 aaPredicted RBP18.8■□□□□ 0.6
CARMIL3-201ENST00000342740 FAM83GA6ND36 823 aa18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 CCDC158Q5M9N0 1113 aa18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 AACSQ86V21 672 aa18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 FBXW7Q969H0 707 aa18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 RAD21O60216 631 aa18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 DNMT1P26358 1616 aaKnown RBP18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 HSP90AB2PQ58FF8 381 aa18.79■□□□□ 0.6
CARMIL3-201ENST00000342740 CCDC57Q2TAC2 916 aa18.78■□□□□ 0.6
CARMIL3-201ENST00000342740 KRT28Q7Z3Y7 464 aa18.78■□□□□ 0.6
CARMIL3-201ENST00000342740 RIMS2Q9UQ26 1411 aa18.78■□□□□ 0.6
CARMIL3-201ENST00000342740 PUS7Q96PZ0 661 aaKnown RBP18.77■□□□□ 0.6
CARMIL3-201ENST00000342740 DHX16O60231 1041 aaKnown RBP18.77■□□□□ 0.6
CARMIL3-201ENST00000342740 CARD14Q9BXL6 1004 aa18.77■□□□□ 0.6
CARMIL3-201ENST00000342740 PBRM1Q86U86 1689 aa18.77■□□□□ 0.59
CARMIL3-201ENST00000342740 PER1O15534 1290 aaPredicted RBP18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 TRIM34Q9BYJ4 488 aa18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 MBIPQ9NS73 344 aa18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 ARHGEF12Q9NZN5 1544 aa18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 IL16Q14005 1332 aa18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 SAFBQ15424 915 aaKnown RBP eCLIP18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 TRAK2O60296 914 aa18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 TPD52L1Q16890 204 aaPredicted RBP18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
CARMIL3-201ENST00000342740 TTC39AQ5SRH9 613 aa18.75■□□□□ 0.59
CARMIL3-201ENST00000342740 ADGRL2O95490 1459 aa18.75■□□□□ 0.59
CARMIL3-201ENST00000342740 PES1O00541 588 aaKnown RBP18.74■□□□□ 0.59
CARMIL3-201ENST00000342740 LARP1Q6PKG0 1096 aaKnown RBP18.74■□□□□ 0.59
CARMIL3-201ENST00000342740 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.74■□□□□ 0.59
CARMIL3-201ENST00000342740 PDCP20941 246 aa18.74■□□□□ 0.59
CARMIL3-201ENST00000342740 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
CARMIL3-201ENST00000342740 CCDC73Q6ZRK6 1079 aa18.74■□□□□ 0.59
CARMIL3-201ENST00000342740 CYP46A1Q9Y6A2 500 aa18.74■□□□□ 0.59
CARMIL3-201ENST00000342740 KIF1BPQ96EK5 621 aa18.74■□□□□ 0.59
CARMIL3-201ENST00000342740 K7ELQ4 463 aaPredicted RBP18.73■□□□□ 0.59
CARMIL3-201ENST00000342740 SMARCA5O60264 1052 aaPredicted RBP18.73■□□□□ 0.59
CARMIL3-201ENST00000342740 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
CARMIL3-201ENST00000342740 FLIIQ13045 1269 aa18.73■□□□□ 0.59
CARMIL3-201ENST00000342740 POLKQ9UBT6 870 aa18.73■□□□□ 0.59
CARMIL3-201ENST00000342740 MPHOSPH8Q99549 860 aa18.73■□□□□ 0.59
CARMIL3-201ENST00000342740 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
CARMIL3-201ENST00000342740 CWC27Q6UX04 472 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms