RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 IPO8O15397 1037 aaKnown RBP9.17□□□□□ -0.94
PTPRR-202ENST00000342084 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
PTPRR-202ENST00000342084 RIMS2Q9UQ26 1411 aa9.17□□□□□ -0.94
PTPRR-202ENST00000342084 CDC42BPGQ6DT37 1551 aa9.17□□□□□ -0.94
PTPRR-202ENST00000342084 VAMP4O75379 141 aa9.17□□□□□ -0.94
PTPRR-202ENST00000342084 NUCB1Q02818 461 aa9.17□□□□□ -0.94
PTPRR-202ENST00000342084 TXNDC2Q86VQ3 553 aa9.17□□□□□ -0.94
PTPRR-202ENST00000342084 MBIPQ9NS73 344 aa9.17□□□□□ -0.94
PTPRR-202ENST00000342084 PPIP5K1Q6PFW1 1433 aa9.17□□□□□ -0.94
PTPRR-202ENST00000342084 A2ML1A8K2U0 1454 aa9.17□□□□□ -0.94
PTPRR-202ENST00000342084 ALDH1L2Q3SY69 923 aa9.16□□□□□ -0.94
PTPRR-202ENST00000342084 ANKRD45Q5TZF3 282 aa9.16□□□□□ -0.94
PTPRR-202ENST00000342084 CHD1LQ86WJ1 897 aa9.16□□□□□ -0.94
PTPRR-202ENST00000342084 GZF1Q9H116 711 aaPredicted RBP9.16□□□□□ -0.94
PTPRR-202ENST00000342084 PNNQ9H307 717 aaKnown RBP9.16□□□□□ -0.94
PTPRR-202ENST00000342084 CPS1P31327 1500 aa9.16□□□□□ -0.94
PTPRR-202ENST00000342084 MAP2P11137 1827 aaKnown RBP9.16□□□□□ -0.94
PTPRR-202ENST00000342084 IL13P35225 146 aa9.15□□□□□ -0.94
PTPRR-202ENST00000342084 METP08581 1390 aa9.15□□□□□ -0.94
PTPRR-202ENST00000342084 ATP7BP35670 1465 aa9.15□□□□□ -0.94
PTPRR-202ENST00000342084 SETD1AO15047 1707 aaKnown RBP9.15□□□□□ -0.94
PTPRR-202ENST00000342084 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.94
PTPRR-202ENST00000342084 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
PTPRR-202ENST00000342084 SIRT2Q8IXJ6 389 aa9.15□□□□□ -0.94
PTPRR-202ENST00000342084 C8orf58Q8NAV2 365 aa9.15□□□□□ -0.94
PTPRR-202ENST00000342084 NUTM2FA1L443 756 aa9.14□□□□□ -0.95
PTPRR-202ENST00000342084 WASLO00401 505 aaPredicted RBP9.14□□□□□ -0.95
PTPRR-202ENST00000342084 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
PTPRR-202ENST00000342084 MCM4P33991 863 aa9.14□□□□□ -0.95
PTPRR-202ENST00000342084 TWISTNBQ3B726 338 aaPredicted RBP9.14□□□□□ -0.95
PTPRR-202ENST00000342084 AEBP1Q8IUX7 1158 aa9.14□□□□□ -0.95
PTPRR-202ENST00000342084 NUDT16Q96DE0 195 aaKnown RBP9.14□□□□□ -0.95
PTPRR-202ENST00000342084 NRXN3Q9Y4C0 1643 aa9.13□□□□□ -0.95
PTPRR-202ENST00000342084 DLC1Q96QB1 1528 aa9.13□□□□□ -0.95
PTPRR-202ENST00000342084 CPSF1Q10570 1443 aaKnown RBP9.13□□□□□ -0.95
PTPRR-202ENST00000342084 PTCH1Q13635 1447 aa9.13□□□□□ -0.95
PTPRR-202ENST00000342084 HSCBQ8IWL3 235 aa9.13□□□□□ -0.95
PTPRR-202ENST00000342084 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
PTPRR-202ENST00000342084 EDC4Q6P2E9 1401 aaKnown RBP9.13□□□□□ -0.95
PTPRR-202ENST00000342084 SOX12O15370 315 aa9.12□□□□□ -0.95
PTPRR-202ENST00000342084 CD2BP2O95400 341 aaKnown RBP9.12□□□□□ -0.95
PTPRR-202ENST00000342084 ZNF853P0CG23 659 aa9.12□□□□□ -0.95
PTPRR-202ENST00000342084 GNAI1P63096 354 aa9.12□□□□□ -0.95
PTPRR-202ENST00000342084 ZNF692Q9BU19 519 aaPredicted RBP9.12□□□□□ -0.95
PTPRR-202ENST00000342084 CHMP5Q9NZZ3 219 aa9.12□□□□□ -0.95
PTPRR-202ENST00000342084 DLG5Q8TDM6 1919 aa9.12□□□□□ -0.95
PTPRR-202ENST00000342084 ABCC4O15439 1325 aa9.12□□□□□ -0.95
PTPRR-202ENST00000342084 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
PTPRR-202ENST00000342084 COG3Q96JB2 828 aa9.12□□□□□ -0.95
PTPRR-202ENST00000342084 RBM42Q9BTD8 480 aaKnown RBP9.12□□□□□ -0.95
PTPRR-202ENST00000342084 CDK12Q9NYV4 1490 aaPredicted RBP9.12□□□□□ -0.95
PTPRR-202ENST00000342084 KNDC1Q76NI1 1749 aa9.11□□□□□ -0.95
PTPRR-202ENST00000342084 PIK3R4Q99570 1358 aa9.11□□□□□ -0.95
PTPRR-202ENST00000342084 RBM25P49756 843 aaKnown RBP9.1□□□□□ -0.95
PTPRR-202ENST00000342084 BMP2KLQ5H9B9 411 aa9.1□□□□□ -0.95
PTPRR-202ENST00000342084 TBC1D9Q6ZT07 1266 aa9.1□□□□□ -0.95
PTPRR-202ENST00000342084 MCM10Q7L590 875 aa9.1□□□□□ -0.95
PTPRR-202ENST00000342084 KIF2CQ99661 725 aa9.1□□□□□ -0.95
PTPRR-202ENST00000342084 PANK2Q9BZ23 570 aa9.1□□□□□ -0.95
PTPRR-202ENST00000342084 APBB1O00213 710 aa9.1□□□□□ -0.95
PTPRR-202ENST00000342084 HSP90AB1P08238 724 aaKnown RBP9.1□□□□□ -0.95
PTPRR-202ENST00000342084 BRPF1P55201 1214 aaPredicted RBP9.1□□□□□ -0.95
PTPRR-202ENST00000342084 SULT6B1Q6IMI4 303 aa9.1□□□□□ -0.95
PTPRR-202ENST00000342084 C16orf71Q8IYS4 520 aaPredicted RBP9.1□□□□□ -0.95
PTPRR-202ENST00000342084 CFAP44Q96MT7 982 aa9.1□□□□□ -0.95
PTPRR-202ENST00000342084 TRAK2O60296 914 aa9.09□□□□□ -0.95
PTPRR-202ENST00000342084 GSPT1P15170 499 aaKnown RBP9.09□□□□□ -0.95
PTPRR-202ENST00000342084 CALD1Q05682 793 aaKnown RBP9.09□□□□□ -0.95
PTPRR-202ENST00000342084 EIF4A2Q14240 407 aaKnown RBP9.09□□□□□ -0.95
PTPRR-202ENST00000342084 OTUD7AQ8TE49 926 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-202ENST00000342084 GCC1Q96CN9 775 aa9.09□□□□□ -0.95
PTPRR-202ENST00000342084 MON2Q7Z3U7 1717 aa9.09□□□□□ -0.95
PTPRR-202ENST00000342084 NCOA3Q9Y6Q9 1424 aa9.09□□□□□ -0.95
PTPRR-202ENST00000342084 XRCC6P12956 609 aaKnown RBP eCLIP9.09□□□□□ -0.95
PTPRR-202ENST00000342084 ARHGAP45Q92619 1136 aa9.09□□□□□ -0.95
PTPRR-202ENST00000342084 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
PTPRR-202ENST00000342084 AATKQ6ZMQ8 1374 aa9.08□□□□□ -0.96
PTPRR-202ENST00000342084 DDIT3P35638 169 aa9.08□□□□□ -0.96
PTPRR-202ENST00000342084 ZNF428Q96B54 188 aa9.08□□□□□ -0.96
PTPRR-202ENST00000342084 RRAGDQ9NQL2 400 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-202ENST00000342084 MIS18AQ9NYP9 233 aa9.08□□□□□ -0.96
PTPRR-202ENST00000342084 ROBO2Q9HCK4 1378 aa9.08□□□□□ -0.96
PTPRR-202ENST00000342084 C3P01024 1663 aa9.08□□□□□ -0.96
PTPRR-202ENST00000342084 GOLGA6L3A6NEY3 463 aa9.07□□□□□ -0.96
PTPRR-202ENST00000342084 SMARCA5O60264 1052 aaPredicted RBP9.07□□□□□ -0.96
PTPRR-202ENST00000342084 TNPO1Q92973 898 aaKnown RBP9.07□□□□□ -0.96
PTPRR-202ENST00000342084 API5Q9BZZ5 524 aaKnown RBP9.07□□□□□ -0.96
PTPRR-202ENST00000342084 ITSN1Q15811 1721 aa9.07□□□□□ -0.96
PTPRR-202ENST00000342084 FOXO3O43524 673 aa9.07□□□□□ -0.96
PTPRR-202ENST00000342084 LMOD3Q0VAK6 560 aa9.07□□□□□ -0.96
PTPRR-202ENST00000342084 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
PTPRR-202ENST00000342084 L1TD1Q5T7N2 865 aaKnown RBP9.07□□□□□ -0.96
PTPRR-202ENST00000342084 SNX21Q969T3 373 aa9.07□□□□□ -0.96
PTPRR-202ENST00000342084 RGS12O14924 1447 aa9.06□□□□□ -0.96
PTPRR-202ENST00000342084 MSH6P52701 1360 aa9.06□□□□□ -0.96
PTPRR-202ENST00000342084 FSD2A1L4K1 749 aa9.06□□□□□ -0.96
PTPRR-202ENST00000342084 PLEKHM2Q8IWE5 1019 aa9.06□□□□□ -0.96
PTPRR-202ENST00000342084 FAM43AQ8N2R8 423 aa9.06□□□□□ -0.96
PTPRR-202ENST00000342084 AKAP12Q02952 1782 aa9.06□□□□□ -0.96
PTPRR-202ENST00000342084 RIMS1Q86UR5 1692 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms