RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 HS1BP3Q53T59 392 aa8.82□□□□□ -1
LMO7-202ENST00000341547 XBP1P17861 261 aa8.82□□□□□ -1
LMO7-202ENST00000341547 STAC3Q96MF2 364 aa8.82□□□□□ -1
LMO7-202ENST00000341547 CCDC183Q5T5S1 534 aa8.81□□□□□ -1
LMO7-202ENST00000341547 ZNHIT6Q9NWK9 470 aaKnown RBP8.81□□□□□ -1
LMO7-202ENST00000341547 POLR3GO15318 223 aaPredicted RBP8.81□□□□□ -1
LMO7-202ENST00000341547 IPO4Q8TEX9 1081 aaKnown RBP8.81□□□□□ -1
LMO7-202ENST00000341547 UBTFL1P0CB47 393 aaPredicted RBP8.81□□□□□ -1
LMO7-202ENST00000341547 CHD1LQ86WJ1 897 aa8.81□□□□□ -1
LMO7-202ENST00000341547 GBP3Q9H0R5 595 aa8.81□□□□□ -1
LMO7-202ENST00000341547 STK38Q15208 465 aa8.81□□□□□ -1
LMO7-202ENST00000341547 MEX3CQ5U5Q3 659 aaKnown RBP8.81□□□□□ -1
LMO7-202ENST00000341547 FSD1Q9BTV5 496 aa8.81□□□□□ -1
LMO7-202ENST00000341547 HFM1A2PYH4 1435 aa8.81□□□□□ -1
LMO7-202ENST00000341547 MAP4K4O95819 1239 aaPredicted RBP8.81□□□□□ -1
LMO7-202ENST00000341547 IRX3P78415 501 aaPredicted RBP8.81□□□□□ -1
LMO7-202ENST00000341547 RIC3Q7Z5B4 369 aa8.81□□□□□ -1
LMO7-202ENST00000341547 WDR63Q8IWG1 891 aa8.81□□□□□ -1
LMO7-202ENST00000341547 TXLNBQ8N3L3 684 aa8.81□□□□□ -1
LMO7-202ENST00000341547 EVA1CP58658 441 aa8.8□□□□□ -1
LMO7-202ENST00000341547 UBXN4Q92575 508 aa8.8□□□□□ -1
LMO7-202ENST00000341547 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
LMO7-202ENST00000341547 NCOA2Q15596 1464 aa8.8□□□□□ -1
LMO7-202ENST00000341547 SURF6O75683 361 aaKnown RBP8.8□□□□□ -1
LMO7-202ENST00000341547 NUP62CLQ9H1M0 184 aa8.8□□□□□ -1
LMO7-202ENST00000341547 ERCC6Q03468 1493 aa8.8□□□□□ -1
LMO7-202ENST00000341547 SPDYE4A6NLX3 237 aa8.8□□□□□ -1
LMO7-202ENST00000341547 PTPN14Q15678 1187 aa8.8□□□□□ -1
LMO7-202ENST00000341547 TICAM2Q86XR7 235 aa8.8□□□□□ -1
LMO7-202ENST00000341547 DDX11Q96FC9 970 aa8.8□□□□□ -1
LMO7-202ENST00000341547 NEMFO60524 1076 aa8.8□□□□□ -1
LMO7-202ENST00000341547 KRT85P78386 507 aa8.8□□□□□ -1
LMO7-202ENST00000341547 ZRSR2Q15696 482 aaKnown RBP8.8□□□□□ -1
LMO7-202ENST00000341547 GOLGA6L10A0A0M3HER8 536 aa8.8□□□□□ -1
LMO7-202ENST00000341547 KLHL40Q2TBA0 621 aa8.8□□□□□ -1
LMO7-202ENST00000341547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.8□□□□□ -1
LMO7-202ENST00000341547 EFCAB2Q5VUJ9 269 aa8.8□□□□□ -1
LMO7-202ENST00000341547 CLASRPQ8N2M8 674 aaKnown RBP8.8□□□□□ -1
LMO7-202ENST00000341547 PAXBP1Q9Y5B6 917 aa8.79□□□□□ -1
LMO7-202ENST00000341547 DHX29Q7Z478 1369 aaKnown RBP8.79□□□□□ -1
LMO7-202ENST00000341547 SYCP1Q15431 976 aa8.79□□□□□ -1
LMO7-202ENST00000341547 KIF18AQ8NI77 898 aa8.79□□□□□ -1
LMO7-202ENST00000341547 TIAM1Q13009 1591 aa8.79□□□□□ -1
LMO7-202ENST00000341547 IQCEQ6IPM2 695 aa8.79□□□□□ -1
LMO7-202ENST00000341547 KRT222Q8N1A0 295 aa8.79□□□□□ -1
LMO7-202ENST00000341547 SLFN5Q08AF3 891 aa8.79□□□□□ -1
LMO7-202ENST00000341547 EID1Q9Y6B2 187 aa8.79□□□□□ -1
LMO7-202ENST00000341547 BMS1Q14692 1282 aaKnown RBP8.79□□□□□ -1
LMO7-202ENST00000341547 CDK5RAP3Q96JB5 506 aa8.79□□□□□ -1
LMO7-202ENST00000341547 SHTN1A0MZ66 631 aa8.78□□□□□ -1
LMO7-202ENST00000341547 HIP1O00291 1037 aa8.78□□□□□ -1
LMO7-202ENST00000341547 GTF2A1P52655 376 aaPredicted RBP8.78□□□□□ -1
LMO7-202ENST00000341547 LARP1BQ659C4 914 aaKnown RBP8.78□□□□□ -1
LMO7-202ENST00000341547 DACH1Q9UI36 760 aa8.78□□□□□ -1
LMO7-202ENST00000341547 TXLNAP40222 546 aa8.78□□□□□ -1
LMO7-202ENST00000341547 MAP3K11Q16584 847 aa8.78□□□□□ -1
LMO7-202ENST00000341547 ZFP91Q96JP5 570 aaPredicted RBP8.78□□□□□ -1
LMO7-202ENST00000341547 ANKRD1Q15327 319 aa8.78□□□□□ -1
LMO7-202ENST00000341547 ZSCAN31Q96LW9 406 aaPredicted RBP8.78□□□□□ -1
LMO7-202ENST00000341547 NOB1Q9ULX3 412 aaKnown RBP8.78□□□□□ -1
LMO7-202ENST00000341547 PIP4K2AP48426 406 aaPredicted RBP8.78□□□□□ -1
LMO7-202ENST00000341547 TNNT1P13805 278 aa8.78□□□□□ -1
LMO7-202ENST00000341547 TERF1P54274 439 aa8.78□□□□□ -1
LMO7-202ENST00000341547 IKQ13123 557 aaPredicted RBP8.78□□□□□ -1
LMO7-202ENST00000341547 CAMK4Q16566 473 aa8.78□□□□□ -1
LMO7-202ENST00000341547 TBC1D32Q96NH3 1257 aa8.78□□□□□ -1
LMO7-202ENST00000341547 INCENPQ9NQS7 918 aa8.78□□□□□ -1
LMO7-202ENST00000341547 NKTRP30414 1462 aaKnown RBP8.78□□□□□ -1
LMO7-202ENST00000341547 POLA1P09884 1462 aaPredicted RBP8.77□□□□□ -1
LMO7-202ENST00000341547 POTEB2H3BUK9 544 aa8.77□□□□□ -1
LMO7-202ENST00000341547 CEP57L1Q8IYX8 460 aa8.77□□□□□ -1
LMO7-202ENST00000341547 ZHX3Q9H4I2 956 aa8.77□□□□□ -1
LMO7-202ENST00000341547 SSFA2P28290 1259 aa8.77□□□□□ -1.01
LMO7-202ENST00000341547 CCAR1Q8IX12 1150 aaKnown RBP8.77□□□□□ -1.01
LMO7-202ENST00000341547 TCP11L2Q8N4U5 519 aa8.77□□□□□ -1.01
LMO7-202ENST00000341547 TANGO6Q9C0B7 1094 aa8.77□□□□□ -1.01
LMO7-202ENST00000341547 EHBP1L1Q8N3D4 1523 aa8.77□□□□□ -1.01
LMO7-202ENST00000341547 GTF2F1P35269 517 aaKnown RBP eCLIP8.77□□□□□ -1.01
LMO7-202ENST00000341547 ZSCAN23Q3MJ62 389 aa8.77□□□□□ -1.01
LMO7-202ENST00000341547 SMTNL1A8MU46 457 aa8.77□□□□□ -1.01
LMO7-202ENST00000341547 MCM3P25205 808 aa8.77□□□□□ -1.01
LMO7-202ENST00000341547 KIAA1328Q86T90 577 aa8.77□□□□□ -1.01
LMO7-202ENST00000341547 MTHFSP49914 203 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 LRSAM1Q6UWE0 723 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 CRACR2AQ9BSW2 395 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 TMX1Q9H3N1 280 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 ZKSCAN5Q9Y2L8 839 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 CYP46A1Q9Y6A2 500 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 ZSCAN12O43309 604 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 KIF20AO95235 890 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
LMO7-202ENST00000341547 TRMT1Q9NXH9 659 aaKnown RBP8.76□□□□□ -1.01
LMO7-202ENST00000341547 LRPPRCP42704 1394 aaKnown RBP8.76□□□□□ -1.01
LMO7-202ENST00000341547 SART3Q15020 963 aaKnown RBP8.76□□□□□ -1.01
LMO7-202ENST00000341547 CTR9Q6PD62 1173 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 NCOA1Q15788 1441 aa8.76□□□□□ -1.01
LMO7-202ENST00000341547 KRT18P05783 430 aaKnown RBP8.75□□□□□ -1.01
LMO7-202ENST00000341547 MICALCLQ6ZW33 695 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 SPATA32Q96LK8 384 aa8.75□□□□□ -1.01
LMO7-202ENST00000341547 KIAA1107Q9UPP5 1409 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms