RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 TARBP1Q13395 1621 aaKnown RBP14.54□□□□□ -0.08
CDH5-201ENST00000341529 NASPP49321 788 aaPredicted RBP14.53□□□□□ -0.08
CDH5-201ENST00000341529 RBM42Q9BTD8 480 aaKnown RBP14.53□□□□□ -0.08
CDH5-201ENST00000341529 DENND4BO75064 1496 aaPredicted RBP14.53□□□□□ -0.08
CDH5-201ENST00000341529 AMOTL2Q9Y2J4 779 aa14.53□□□□□ -0.08
CDH5-201ENST00000341529 K7ELQ4 463 aaPredicted RBP14.52□□□□□ -0.08
CDH5-201ENST00000341529 WASLO00401 505 aaPredicted RBP14.52□□□□□ -0.08
CDH5-201ENST00000341529 APPP05067 770 aa14.52□□□□□ -0.08
CDH5-201ENST00000341529 GTF2E1P29083 439 aaPredicted RBP14.52□□□□□ -0.08
CDH5-201ENST00000341529 CCDC85AQ96PX6 553 aaPredicted RBP14.52□□□□□ -0.08
CDH5-201ENST00000341529 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.08
CDH5-201ENST00000341529 KDM5BQ9UGL1 1544 aa14.52□□□□□ -0.08
CDH5-201ENST00000341529 FSD1Q9BTV5 496 aa14.52□□□□□ -0.09
CDH5-201ENST00000341529 RUFY2Q8WXA3 655 aa14.51□□□□□ -0.09
CDH5-201ENST00000341529 STRN4Q9NRL3 753 aa14.51□□□□□ -0.09
CDH5-201ENST00000341529 DDX58O95786 925 aaKnown RBP14.51□□□□□ -0.09
CDH5-201ENST00000341529 C8orf58Q8NAV2 365 aa14.51□□□□□ -0.09
CDH5-201ENST00000341529 LRRCC1Q9C099 1032 aa14.51□□□□□ -0.09
CDH5-201ENST00000341529 C16orf71Q8IYS4 520 aaPredicted RBP14.51□□□□□ -0.09
CDH5-201ENST00000341529 FAM13BQ9NYF5 915 aa14.51□□□□□ -0.09
CDH5-201ENST00000341529 CT47B1P0C2W7 299 aaPredicted RBP14.51□□□□□ -0.09
CDH5-201ENST00000341529 STK3Q13188 491 aa14.51□□□□□ -0.09
CDH5-201ENST00000341529 CWC27Q6UX04 472 aaKnown RBP14.51□□□□□ -0.09
CDH5-201ENST00000341529 BICD2Q8TD16 824 aa14.51□□□□□ -0.09
CDH5-201ENST00000341529 MRE11P49959 708 aa14.5□□□□□ -0.09
CDH5-201ENST00000341529 CEBPZQ03701 1054 aaKnown RBP14.5□□□□□ -0.09
CDH5-201ENST00000341529 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
CDH5-201ENST00000341529 SRCIN1Q9C0H9 1055 aa14.5□□□□□ -0.09
CDH5-201ENST00000341529 RABEP1Q15276 862 aa14.5□□□□□ -0.09
CDH5-201ENST00000341529 A2MP01023 1474 aa14.49□□□□□ -0.09
CDH5-201ENST00000341529 ERC2O15083 957 aa14.49□□□□□ -0.09
CDH5-201ENST00000341529 SSFA2P28290 1259 aa14.49□□□□□ -0.09
CDH5-201ENST00000341529 HSP90AA2PQ14568 343 aaPredicted RBP14.49□□□□□ -0.09
CDH5-201ENST00000341529 GOLGA6L6A8MZA4 724 aa14.49□□□□□ -0.09
CDH5-201ENST00000341529 WDR7Q9Y4E6 1490 aa14.49□□□□□ -0.09
CDH5-201ENST00000341529 MPRIPQ6WCQ1 1025 aa14.48□□□□□ -0.09
CDH5-201ENST00000341529 ANKLE2Q86XL3 938 aa14.48□□□□□ -0.09
CDH5-201ENST00000341529 FAM43AQ8N2R8 423 aa14.48□□□□□ -0.09
CDH5-201ENST00000341529 MEIS3Q99687 375 aa14.48□□□□□ -0.09
CDH5-201ENST00000341529 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
CDH5-201ENST00000341529 POLKQ9UBT6 870 aa14.48□□□□□ -0.09
CDH5-201ENST00000341529 SPATA31E1Q6ZUB1 1445 aa14.48□□□□□ -0.09
CDH5-201ENST00000341529 NRDCO43847 1150 aa14.47□□□□□ -0.09
CDH5-201ENST00000341529 WASHC4Q2M389 1173 aa14.47□□□□□ -0.09
CDH5-201ENST00000341529 JARID2Q92833 1246 aaPredicted RBP14.47□□□□□ -0.09
CDH5-201ENST00000341529 PHF14O94880 888 aa14.47□□□□□ -0.09
CDH5-201ENST00000341529 STK11IPQ8N1F8 1099 aa14.47□□□□□ -0.09
CDH5-201ENST00000341529 GDPD2Q9HCC8 539 aa14.47□□□□□ -0.09
CDH5-201ENST00000341529 CCT4P50991 539 aaKnown RBP14.46□□□□□ -0.09
CDH5-201ENST00000341529 ZNF592Q92610 1267 aa14.46□□□□□ -0.09
CDH5-201ENST00000341529 TBC1D32Q96NH3 1257 aa14.46□□□□□ -0.09
CDH5-201ENST00000341529 LRRFIP2Q9Y608 721 aaKnown RBP14.46□□□□□ -0.09
CDH5-201ENST00000341529 TAF7Q15545 349 aaPredicted RBP14.46□□□□□ -0.1
CDH5-201ENST00000341529 PLEKHO1Q53GL0 409 aaPredicted RBP14.46□□□□□ -0.1
CDH5-201ENST00000341529 FERMT3Q86UX7 667 aa14.46□□□□□ -0.1
CDH5-201ENST00000341529 CNTROBQ8N137 903 aa14.46□□□□□ -0.1
CDH5-201ENST00000341529 GRPEL1Q9HAV7 217 aa14.46□□□□□ -0.1
CDH5-201ENST00000341529 IFT57Q9NWB7 429 aa14.46□□□□□ -0.1
CDH5-201ENST00000341529 R3HCC1Q9Y3T6 440 aaKnown RBP14.46□□□□□ -0.1
CDH5-201ENST00000341529 ATP6V1DQ9Y5K8 247 aa14.46□□□□□ -0.1
CDH5-201ENST00000341529 NINLQ9Y2I6 1382 aa14.45□□□□□ -0.1
CDH5-201ENST00000341529 BECN2A8MW95 431 aa14.45□□□□□ -0.1
CDH5-201ENST00000341529 DTNBO60941 627 aa14.45□□□□□ -0.1
CDH5-201ENST00000341529 RSPH6AQ9H0K4 717 aa14.45□□□□□ -0.1
CDH5-201ENST00000341529 ACEP12821 1306 aa14.45□□□□□ -0.1
CDH5-201ENST00000341529 HTATSF1O43719 755 aaKnown RBP14.45□□□□□ -0.1
CDH5-201ENST00000341529 PPFIA3O75145 1194 aa14.45□□□□□ -0.1
CDH5-201ENST00000341529 RPAP2Q8IXW5 612 aaPredicted RBP14.45□□□□□ -0.1
CDH5-201ENST00000341529 ASXL1Q8IXJ9 1541 aa14.45□□□□□ -0.1
CDH5-201ENST00000341529 BTBD11A6QL63 1104 aa14.44□□□□□ -0.1
CDH5-201ENST00000341529 ERCC6L2Q5T890 1561 aa14.44□□□□□ -0.1
CDH5-201ENST00000341529 HSP90AB4PQ58FF6 505 aa14.44□□□□□ -0.1
CDH5-201ENST00000341529 AACSQ86V21 672 aa14.44□□□□□ -0.1
CDH5-201ENST00000341529 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
CDH5-201ENST00000341529 TNPO1Q92973 898 aaKnown RBP14.44□□□□□ -0.1
CDH5-201ENST00000341529 SAMD9Q5K651 1589 aa14.44□□□□□ -0.1
CDH5-201ENST00000341529 GNAT3A8MTJ3 354 aa14.43□□□□□ -0.1
CDH5-201ENST00000341529 PTCD1O75127 700 aaKnown RBP14.43□□□□□ -0.1
CDH5-201ENST00000341529 CPLX1O14810 134 aa14.43□□□□□ -0.1
CDH5-201ENST00000341529 CSPP1Q1MSJ5 1256 aa14.43□□□□□ -0.1
CDH5-201ENST00000341529 HSPA2P54652 639 aa14.43□□□□□ -0.1
CDH5-201ENST00000341529 ALDH1L2Q3SY69 923 aa14.43□□□□□ -0.1
CDH5-201ENST00000341529 RNF20Q5VTR2 975 aa14.43□□□□□ -0.1
CDH5-201ENST00000341529 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
CDH5-201ENST00000341529 PANK2Q9BZ23 570 aa14.42□□□□□ -0.1
CDH5-201ENST00000341529 GOLGA6L19H0YKK7 550 aa14.42□□□□□ -0.1
CDH5-201ENST00000341529 ATP2B1P20020 1258 aa14.42□□□□□ -0.1
CDH5-201ENST00000341529 NUTM2BA6NNL0 878 aaPredicted RBP14.42□□□□□ -0.1
CDH5-201ENST00000341529 NUTM2EB1AL46 878 aaPredicted RBP14.42□□□□□ -0.1
CDH5-201ENST00000341529 NUTM2AQ8IVF1 878 aaPredicted RBP14.42□□□□□ -0.1
CDH5-201ENST00000341529 FLIIQ13045 1269 aa14.41□□□□□ -0.1
CDH5-201ENST00000341529 SPG7Q9UQ90 795 aa14.41□□□□□ -0.1
CDH5-201ENST00000341529 DNMT1P26358 1616 aaKnown RBP14.41□□□□□ -0.1
CDH5-201ENST00000341529 FMNL2Q96PY5 1086 aa14.41□□□□□ -0.1
CDH5-201ENST00000341529 CCDC8Q9H0W5 538 aaPredicted RBP14.41□□□□□ -0.1
CDH5-201ENST00000341529 MX1P20591 662 aa14.41□□□□□ -0.1
CDH5-201ENST00000341529 PIP4K2AP48426 406 aaPredicted RBP14.41□□□□□ -0.1
CDH5-201ENST00000341529 SPC24Q8NBT2 197 aa14.41□□□□□ -0.1
CDH5-201ENST00000341529 RASSF8Q8NHQ8 419 aa14.41□□□□□ -0.1
CDH5-201ENST00000341529 CHMP4CQ96CF2 233 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms