RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
TRIM60-201ENST00000341062 MTHFSP49914 203 aa17.48■□□□□ 0.39
TRIM60-201ENST00000341062 NLRP6P59044 892 aa17.48■□□□□ 0.39
TRIM60-201ENST00000341062 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
TRIM60-201ENST00000341062 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
TRIM60-201ENST00000341062 CRYBG1Q9Y4K1 1723 aa17.48■□□□□ 0.39
TRIM60-201ENST00000341062 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
TRIM60-201ENST00000341062 MS4A1P11836 297 aa17.47■□□□□ 0.39
TRIM60-201ENST00000341062 WWC1Q8IX03 1113 aa17.47■□□□□ 0.39
TRIM60-201ENST00000341062 MAP2P11137 1827 aaKnown RBP17.47■□□□□ 0.39
TRIM60-201ENST00000341062 TTC21AQ8NDW8 1320 aa17.46■□□□□ 0.39
TRIM60-201ENST00000341062 C20orf194Q5TEA3 1177 aa17.46■□□□□ 0.39
TRIM60-201ENST00000341062 USP54Q70EL1 1684 aa17.46■□□□□ 0.39
TRIM60-201ENST00000341062 SBNO1A3KN83 1393 aa17.45■□□□□ 0.38
TRIM60-201ENST00000341062 CCDC27Q2M243 656 aa17.45■□□□□ 0.38
TRIM60-201ENST00000341062 RRS1Q15050 365 aaKnown RBP17.44■□□□□ 0.38
TRIM60-201ENST00000341062 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
TRIM60-201ENST00000341062 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
TRIM60-201ENST00000341062 ABCA3Q99758 1704 aa17.44■□□□□ 0.38
TRIM60-201ENST00000341062 COG3Q96JB2 828 aa17.44■□□□□ 0.38
TRIM60-201ENST00000341062 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
TRIM60-201ENST00000341062 PHRF1Q9P1Y6 1649 aaKnown RBP17.43■□□□□ 0.38
TRIM60-201ENST00000341062 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
TRIM60-201ENST00000341062 HSPA1LP34931 641 aa17.43■□□□□ 0.38
TRIM60-201ENST00000341062 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
TRIM60-201ENST00000341062 EMILIN1Q9Y6C2 1016 aa17.42■□□□□ 0.38
TRIM60-201ENST00000341062 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
TRIM60-201ENST00000341062 NFAT5O94916 1531 aa17.41■□□□□ 0.38
TRIM60-201ENST00000341062 USP19O94966 1318 aa17.41■□□□□ 0.38
TRIM60-201ENST00000341062 SLIT3O75094 1523 aa17.4■□□□□ 0.38
TRIM60-201ENST00000341062 LTN1O94822 1766 aa17.4■□□□□ 0.38
TRIM60-201ENST00000341062 CENPQQ7L2Z9 268 aaPredicted RBP17.39■□□□□ 0.38
TRIM60-201ENST00000341062 POLKQ9UBT6 870 aa17.39■□□□□ 0.38
TRIM60-201ENST00000341062 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
TRIM60-201ENST00000341062 RGPD5Q99666 1765 aa17.37■□□□□ 0.37
TRIM60-201ENST00000341062 GCP02774 474 aa17.37■□□□□ 0.37
TRIM60-201ENST00000341062 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
TRIM60-201ENST00000341062 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
TRIM60-201ENST00000341062 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
TRIM60-201ENST00000341062 ANP32AP39687 249 aaKnown RBP17.37■□□□□ 0.37
TRIM60-201ENST00000341062 LRRC59Q96AG4 307 aaKnown RBP17.37■□□□□ 0.37
TRIM60-201ENST00000341062 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
TRIM60-201ENST00000341062 PPM1GO15355 546 aaPredicted RBP17.36■□□□□ 0.37
TRIM60-201ENST00000341062 BCAR3O75815 825 aa17.36■□□□□ 0.37
TRIM60-201ENST00000341062 BACH2Q9BYV9 841 aa17.36■□□□□ 0.37
TRIM60-201ENST00000341062 ARHGEF10O15013 1369 aa17.36■□□□□ 0.37
TRIM60-201ENST00000341062 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
TRIM60-201ENST00000341062 PDE4AP27815 886 aa17.35■□□□□ 0.37
TRIM60-201ENST00000341062 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
TRIM60-201ENST00000341062 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
TRIM60-201ENST00000341062 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRIM60-201ENST00000341062 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
TRIM60-201ENST00000341062 AATKQ6ZMQ8 1374 aa17.33■□□□□ 0.36
TRIM60-201ENST00000341062 IPO9Q96P70 1041 aaKnown RBP17.33■□□□□ 0.36
TRIM60-201ENST00000341062 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.36
TRIM60-201ENST00000341062 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
TRIM60-201ENST00000341062 COL18A1P39060 1754 aa17.33■□□□□ 0.36
TRIM60-201ENST00000341062 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
TRIM60-201ENST00000341062 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
TRIM60-201ENST00000341062 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
TRIM60-201ENST00000341062 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
TRIM60-201ENST00000341062 NUTM2BA6NNL0 878 aaPredicted RBP17.31■□□□□ 0.36
TRIM60-201ENST00000341062 NUTM2EB1AL46 878 aaPredicted RBP17.31■□□□□ 0.36
TRIM60-201ENST00000341062 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
TRIM60-201ENST00000341062 ARHGEF25Q86VW2 580 aa17.31■□□□□ 0.36
TRIM60-201ENST00000341062 NUTM2AQ8IVF1 878 aaPredicted RBP17.31■□□□□ 0.36
TRIM60-201ENST00000341062 MYH16Q9H6N6 1097 aa17.31■□□□□ 0.36
TRIM60-201ENST00000341062 AAMPQ13685 434 aa17.31■□□□□ 0.36
TRIM60-201ENST00000341062 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
TRIM60-201ENST00000341062 LRP6O75581 1613 aa17.3■□□□□ 0.36
TRIM60-201ENST00000341062 RARSP54136 660 aaKnown RBP17.3■□□□□ 0.36
TRIM60-201ENST00000341062 CT47B1P0C2W7 299 aaPredicted RBP17.29■□□□□ 0.36
TRIM60-201ENST00000341062 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
TRIM60-201ENST00000341062 HOXC9P31274 260 aa17.28■□□□□ 0.36
TRIM60-201ENST00000341062 FAM83GA6ND36 823 aa17.27■□□□□ 0.36
TRIM60-201ENST00000341062 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.36
TRIM60-201ENST00000341062 JCADQ9P266 1359 aa17.27■□□□□ 0.36
TRIM60-201ENST00000341062 IL16Q14005 1332 aa17.27■□□□□ 0.35
TRIM60-201ENST00000341062 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.35
TRIM60-201ENST00000341062 TMPOP42166 694 aaKnown RBP17.27■□□□□ 0.35
TRIM60-201ENST00000341062 KCNH5Q8NCM2 988 aa17.27■□□□□ 0.35
TRIM60-201ENST00000341062 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.35
TRIM60-201ENST00000341062 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
TRIM60-201ENST00000341062 CDK12Q9NYV4 1490 aaPredicted RBP17.26■□□□□ 0.35
TRIM60-201ENST00000341062 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
TRIM60-201ENST00000341062 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
TRIM60-201ENST00000341062 AMPHP49418 695 aa17.25■□□□□ 0.35
TRIM60-201ENST00000341062 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
TRIM60-201ENST00000341062 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
TRIM60-201ENST00000341062 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
TRIM60-201ENST00000341062 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
TRIM60-201ENST00000341062 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
TRIM60-201ENST00000341062 EIF4A2Q14240 407 aaKnown RBP17.24■□□□□ 0.35
TRIM60-201ENST00000341062 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
TRIM60-201ENST00000341062 FLT4P35916 1363 aa17.24■□□□□ 0.35
TRIM60-201ENST00000341062 TRIM35Q9UPQ4 493 aa17.24■□□□□ 0.35
TRIM60-201ENST00000341062 CPDO75976 1380 aa17.23■□□□□ 0.35
TRIM60-201ENST00000341062 IL13P35225 146 aa17.23■□□□□ 0.35
TRIM60-201ENST00000341062 IP6K1Q92551 441 aa17.23■□□□□ 0.35
TRIM60-201ENST00000341062 PRDM11Q9NQV5 511 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms