RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CSB-PGBD3P0DP91 1061 aa18.89■□□□□ 0.61
NUDCD3-201ENST00000338427 PTF1AQ7RTS3 328 aa18.89■□□□□ 0.61
NUDCD3-201ENST00000338427 CRB1P82279 1406 aa18.89■□□□□ 0.61
NUDCD3-201ENST00000338427 FBLN1P23142 703 aa18.88■□□□□ 0.61
NUDCD3-201ENST00000338427 R3HDM1Q15032 1099 aaKnown RBP18.88■□□□□ 0.61
NUDCD3-201ENST00000338427 HDGFL2Q7Z4V5 671 aaPredicted RBP18.88■□□□□ 0.61
NUDCD3-201ENST00000338427 RGPD5Q99666 1765 aa18.88■□□□□ 0.61
NUDCD3-201ENST00000338427 WDR17Q8IZU2 1322 aa18.87■□□□□ 0.61
NUDCD3-201ENST00000338427 DDB1Q16531 1140 aa18.86■□□□□ 0.61
NUDCD3-201ENST00000338427 MARCH10Q8NA82 808 aaPredicted RBP18.85■□□□□ 0.61
NUDCD3-201ENST00000338427 CARD10Q9BWT7 1032 aa18.85■□□□□ 0.61
NUDCD3-201ENST00000338427 USP31Q70CQ4 1352 aa18.84■□□□□ 0.61
NUDCD3-201ENST00000338427 TERF2IPQ9NYB0 399 aa18.84■□□□□ 0.61
NUDCD3-201ENST00000338427 RGPD1P0DJD0 1748 aa18.83■□□□□ 0.61
NUDCD3-201ENST00000338427 A0A1W2PP64 1363 aa18.83■□□□□ 0.61
NUDCD3-201ENST00000338427 PUS7Q96PZ0 661 aaKnown RBP18.83■□□□□ 0.6
NUDCD3-201ENST00000338427 NFAT5O94916 1531 aa18.83■□□□□ 0.6
NUDCD3-201ENST00000338427 TNS1Q9HBL0 1735 aaKnown RBP18.83■□□□□ 0.6
NUDCD3-201ENST00000338427 MON2Q7Z3U7 1717 aa18.82■□□□□ 0.6
NUDCD3-201ENST00000338427 NLRP2Q9NX02 1062 aa18.8■□□□□ 0.6
NUDCD3-201ENST00000338427 DISP2A7MBM2 1401 aa18.8■□□□□ 0.6
NUDCD3-201ENST00000338427 EXOC5O00471 708 aa18.79■□□□□ 0.6
NUDCD3-201ENST00000338427 LTV1Q96GA3 475 aaPredicted RBP18.79■□□□□ 0.6
NUDCD3-201ENST00000338427 EDC4Q6P2E9 1401 aaKnown RBP18.78■□□□□ 0.6
NUDCD3-201ENST00000338427 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
NUDCD3-201ENST00000338427 PARP4Q9UKK3 1724 aaKnown RBP18.77■□□□□ 0.6
NUDCD3-201ENST00000338427 USP47Q96K76 1375 aa18.77■□□□□ 0.6
NUDCD3-201ENST00000338427 KCNQ2O43526 872 aa18.76■□□□□ 0.59
NUDCD3-201ENST00000338427 PROM2Q8N271 834 aa18.76■□□□□ 0.59
NUDCD3-201ENST00000338427 TMF1P82094 1093 aa18.75■□□□□ 0.59
NUDCD3-201ENST00000338427 CDCA7Q9BWT1 371 aaPredicted RBP18.75■□□□□ 0.59
NUDCD3-201ENST00000338427 GGNBP2Q9H3C7 697 aa18.75■□□□□ 0.59
NUDCD3-201ENST00000338427 ERBB3P21860 1342 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 IP6K1Q92551 441 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 COG3Q96JB2 828 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 BCL11BQ9C0K0 894 aaPredicted RBP18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 PEAK1Q9H792 1746 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 LRRC37A3O60309 1634 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 OVOS2A0A0G2JMS6 1433 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 OVOS2A0A0J9YW53 1432 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 OVOS2Q6IE36 1432 aa18.74■□□□□ 0.59
NUDCD3-201ENST00000338427 FYB1O15117 783 aa18.73■□□□□ 0.59
NUDCD3-201ENST00000338427 NBPF14Q5TI25 921 aa18.72■□□□□ 0.59
NUDCD3-201ENST00000338427 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
NUDCD3-201ENST00000338427 CCDC7Q96M83 1385 aa18.71■□□□□ 0.59
NUDCD3-201ENST00000338427 PLSCR1O15162 318 aa18.71■□□□□ 0.59
NUDCD3-201ENST00000338427 RRS1Q15050 365 aaKnown RBP18.71■□□□□ 0.59
NUDCD3-201ENST00000338427 SBF2Q86WG5 1849 aa18.7■□□□□ 0.58
NUDCD3-201ENST00000338427 C11orf95C9JLR9 678 aaPredicted RBP18.7■□□□□ 0.58
NUDCD3-201ENST00000338427 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
NUDCD3-201ENST00000338427 IL2RBP14784 551 aa18.7■□□□□ 0.58
NUDCD3-201ENST00000338427 AMPHP49418 695 aa18.7■□□□□ 0.58
NUDCD3-201ENST00000338427 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
NUDCD3-201ENST00000338427 LTN1O94822 1766 aa18.7■□□□□ 0.58
NUDCD3-201ENST00000338427 HOXC9P31274 260 aa18.69■□□□□ 0.58
NUDCD3-201ENST00000338427 ANKRD36BQ8N2N9 1353 aa18.68■□□□□ 0.58
NUDCD3-201ENST00000338427 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
NUDCD3-201ENST00000338427 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
NUDCD3-201ENST00000338427 PDGFDQ9GZP0 370 aaPredicted RBP18.68■□□□□ 0.58
NUDCD3-201ENST00000338427 ANO8Q9HCE9 1232 aaPredicted RBP18.68■□□□□ 0.58
NUDCD3-201ENST00000338427 USP54Q70EL1 1684 aa18.68■□□□□ 0.58
NUDCD3-201ENST00000338427 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
NUDCD3-201ENST00000338427 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
NUDCD3-201ENST00000338427 NINLQ9Y2I6 1382 aa18.67■□□□□ 0.58
NUDCD3-201ENST00000338427 TIMELESSQ9UNS1 1208 aa18.66■□□□□ 0.58
NUDCD3-201ENST00000338427 NUP188Q5SRE5 1749 aa18.66■□□□□ 0.58
NUDCD3-201ENST00000338427 TXNRD1Q16881 649 aa18.65■□□□□ 0.58
NUDCD3-201ENST00000338427 USHBP1Q8N6Y0 703 aa18.65■□□□□ 0.58
NUDCD3-201ENST00000338427 RREB1Q92766 1687 aa18.65■□□□□ 0.58
NUDCD3-201ENST00000338427 NBPF6Q5VWK0 638 aa18.64■□□□□ 0.57
NUDCD3-201ENST00000338427 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
NUDCD3-201ENST00000338427 NBPF4Q96M43 638 aa18.64■□□□□ 0.57
NUDCD3-201ENST00000338427 KAT6BQ8WYB5 2073 aa18.64■□□□□ 0.57
NUDCD3-201ENST00000338427 BCL9O00512 1426 aa18.63■□□□□ 0.57
NUDCD3-201ENST00000338427 ABCC6O95255 1503 aa18.63■□□□□ 0.57
NUDCD3-201ENST00000338427 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
NUDCD3-201ENST00000338427 HSP90AB2PQ58FF8 381 aa18.62■□□□□ 0.57
NUDCD3-201ENST00000338427 TNS2Q63HR2 1409 aa18.62■□□□□ 0.57
NUDCD3-201ENST00000338427 LRP5O75197 1615 aa18.62■□□□□ 0.57
NUDCD3-201ENST00000338427 RGPD2P0DJD1 1756 aa18.6■□□□□ 0.57
NUDCD3-201ENST00000338427 CLSPNQ9HAW4 1339 aa18.6■□□□□ 0.57
NUDCD3-201ENST00000338427 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
NUDCD3-201ENST00000338427 EMILIN1Q9Y6C2 1016 aa18.59■□□□□ 0.57
NUDCD3-201ENST00000338427 ZBTB7AO95365 584 aa18.58■□□□□ 0.56
NUDCD3-201ENST00000338427 KCNQ4P56696 695 aa18.58■□□□□ 0.56
NUDCD3-201ENST00000338427 ZCRB1Q8TBF4 217 aaKnown RBP18.58■□□□□ 0.56
NUDCD3-201ENST00000338427 ATF5Q9Y2D1 282 aaPredicted RBP18.58■□□□□ 0.56
NUDCD3-201ENST00000338427 PRIM1P49642 420 aaKnown RBP18.57■□□□□ 0.56
NUDCD3-201ENST00000338427 SPON1Q9HCB6 807 aa18.57■□□□□ 0.56
NUDCD3-201ENST00000338427 LRRC4BQ9NT99 713 aa18.57■□□□□ 0.56
NUDCD3-201ENST00000338427 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
NUDCD3-201ENST00000338427 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
NUDCD3-201ENST00000338427 SLC15A2Q16348 729 aa18.56■□□□□ 0.56
NUDCD3-201ENST00000338427 STK32BQ9NY57 414 aa18.56■□□□□ 0.56
NUDCD3-201ENST00000338427 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
NUDCD3-201ENST00000338427 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
NUDCD3-201ENST00000338427 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
NUDCD3-201ENST00000338427 PPP1R1BQ9UD71 204 aaPredicted RBP18.53■□□□□ 0.56
NUDCD3-201ENST00000338427 MEGF6O75095 1541 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms