RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 NOM1Q5C9Z4 860 aaKnown RBP15.84■□□□□ 0.13
COL2A1-201ENST00000337299 CWC15Q9P013 229 aaKnown RBP15.84■□□□□ 0.13
COL2A1-201ENST00000337299 PRKAR2BP31323 418 aa15.84■□□□□ 0.13
COL2A1-201ENST00000337299 ZBTB9Q96C00 473 aa15.84■□□□□ 0.13
COL2A1-201ENST00000337299 SDF4Q9BRK5 362 aa15.84■□□□□ 0.13
COL2A1-201ENST00000337299 TULP1O00294 542 aaPredicted RBP15.83■□□□□ 0.13
COL2A1-201ENST00000337299 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.13
COL2A1-201ENST00000337299 HECW1Q76N89 1606 aa15.83■□□□□ 0.13
COL2A1-201ENST00000337299 CKAP2LQ8IYA6 745 aa15.83■□□□□ 0.12
COL2A1-201ENST00000337299 TIGD1Q96MW7 591 aa15.83■□□□□ 0.12
COL2A1-201ENST00000337299 CALCOCO1Q9P1Z2 691 aa15.83■□□□□ 0.12
COL2A1-201ENST00000337299 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.12
COL2A1-201ENST00000337299 BMP2KLQ5H9B9 411 aa15.83■□□□□ 0.12
COL2A1-201ENST00000337299 GIMAP6Q6P9H5 292 aa15.83■□□□□ 0.12
COL2A1-201ENST00000337299 CCDC73Q6ZRK6 1079 aa15.83■□□□□ 0.12
COL2A1-201ENST00000337299 GNAI1P63096 354 aa15.82■□□□□ 0.12
COL2A1-201ENST00000337299 FKBP5Q13451 457 aaPredicted RBP15.82■□□□□ 0.12
COL2A1-201ENST00000337299 DDX54Q8TDD1 881 aaKnown RBP15.82■□□□□ 0.12
COL2A1-201ENST00000337299 PARD3Q8TEW0 1356 aa15.82■□□□□ 0.12
COL2A1-201ENST00000337299 NOC3LQ8WTT2 800 aaKnown RBP15.82■□□□□ 0.12
COL2A1-201ENST00000337299 HS1BP3Q53T59 392 aa15.82■□□□□ 0.12
COL2A1-201ENST00000337299 CCDC183Q5T5S1 534 aa15.82■□□□□ 0.12
COL2A1-201ENST00000337299 SNX21Q969T3 373 aa15.82■□□□□ 0.12
COL2A1-201ENST00000337299 ANTXR1Q9H6X2 564 aa15.82■□□□□ 0.12
COL2A1-201ENST00000337299 HSP90B2PQ58FF3 399 aa15.81■□□□□ 0.12
COL2A1-201ENST00000337299 TTLL5Q6EMB2 1281 aa15.81■□□□□ 0.12
COL2A1-201ENST00000337299 GPATCH3Q96I76 525 aa15.81■□□□□ 0.12
COL2A1-201ENST00000337299 CHAMP1Q96JM3 812 aa15.81■□□□□ 0.12
COL2A1-201ENST00000337299 SETQ01105 290 aaPredicted RBP15.81■□□□□ 0.12
COL2A1-201ENST00000337299 PTPN14Q15678 1187 aa15.81■□□□□ 0.12
COL2A1-201ENST00000337299 NUP62CLQ9H1M0 184 aa15.8■□□□□ 0.12
COL2A1-201ENST00000337299 AMPHP49418 695 aa15.8■□□□□ 0.12
COL2A1-201ENST00000337299 PDILTQ8N807 584 aa15.8■□□□□ 0.12
COL2A1-201ENST00000337299 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
COL2A1-201ENST00000337299 LEKR1Q6ZMV7 388 aa15.8■□□□□ 0.12
COL2A1-201ENST00000337299 STK3Q13188 491 aa15.79■□□□□ 0.12
COL2A1-201ENST00000337299 KIF20AO95235 890 aa15.79■□□□□ 0.12
COL2A1-201ENST00000337299 EXOC6BQ9Y2D4 811 aa15.79■□□□□ 0.12
COL2A1-201ENST00000337299 CUL7Q14999 1698 aa15.78■□□□□ 0.12
COL2A1-201ENST00000337299 PES1O00541 588 aaKnown RBP15.78■□□□□ 0.12
COL2A1-201ENST00000337299 TMPOP42166 694 aaKnown RBP15.78■□□□□ 0.12
COL2A1-201ENST00000337299 PER1O15534 1290 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-201ENST00000337299 UBXN4Q92575 508 aa15.78■□□□□ 0.12
COL2A1-201ENST00000337299 TSHZ3Q63HK5 1081 aa15.78■□□□□ 0.12
COL2A1-201ENST00000337299 RUFY2Q8WXA3 655 aa15.77■□□□□ 0.12
COL2A1-201ENST00000337299 KRT85P78386 507 aa15.77■□□□□ 0.12
COL2A1-201ENST00000337299 MAP3K11Q16584 847 aa15.77■□□□□ 0.12
COL2A1-201ENST00000337299 LARP1BQ659C4 914 aaKnown RBP15.77■□□□□ 0.12
COL2A1-201ENST00000337299 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.12
COL2A1-201ENST00000337299 CCDC186Q7Z3E2 898 aa15.77■□□□□ 0.11
COL2A1-201ENST00000337299 KRT222Q8N1A0 295 aa15.77■□□□□ 0.11
COL2A1-201ENST00000337299 MYRIPQ8NFW9 859 aa15.77■□□□□ 0.11
COL2A1-201ENST00000337299 PRAM1Q96QH2 718 aa15.77■□□□□ 0.11
COL2A1-201ENST00000337299 NUTM2GQ5VZR2 741 aa15.77■□□□□ 0.11
COL2A1-201ENST00000337299 ROCK1Q13464 1354 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 PATL2C9JE40 543 aaKnown RBP15.76■□□□□ 0.11
COL2A1-201ENST00000337299 TRIM34Q9BYJ4 488 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 IL1RAPL2Q9NP60 686 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 CAMSAP2Q08AD1 1489 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 KINO60870 393 aaKnown RBP15.76■□□□□ 0.11
COL2A1-201ENST00000337299 TXNDC2Q86VQ3 553 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 AK7Q96M32 723 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 PPP1R9BQ96SB3 815 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 RIOK3O14730 519 aaKnown RBP15.76■□□□□ 0.11
COL2A1-201ENST00000337299 CSB-PGBD3P0DP91 1061 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 EIF2S2P20042 333 aaKnown RBP15.76■□□□□ 0.11
COL2A1-201ENST00000337299 NUCB1Q02818 461 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 GPATCH11Q8N954 259 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 COG3Q96JB2 828 aa15.76■□□□□ 0.11
COL2A1-201ENST00000337299 NOL10Q9BSC4 688 aaKnown RBP15.76■□□□□ 0.11
COL2A1-201ENST00000337299 SURF6O75683 361 aaKnown RBP15.75■□□□□ 0.11
COL2A1-201ENST00000337299 TMCO3Q6UWJ1 677 aa15.75■□□□□ 0.11
COL2A1-201ENST00000337299 CCDC83Q8IWF9 413 aa15.75■□□□□ 0.11
COL2A1-201ENST00000337299 TMX3Q96JJ7 454 aa15.75■□□□□ 0.11
COL2A1-201ENST00000337299 GPRASP1Q5JY77 1395 aa15.75■□□□□ 0.11
COL2A1-201ENST00000337299 TERF1P54274 439 aa15.75■□□□□ 0.11
COL2A1-201ENST00000337299 CLIP2Q9UDT6 1046 aa15.75■□□□□ 0.11
COL2A1-201ENST00000337299 H0YHG0 523 aa15.74■□□□□ 0.11
COL2A1-201ENST00000337299 CT47B1P0C2W7 299 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-201ENST00000337299 USP48Q86UV5 1035 aa15.74■□□□□ 0.11
COL2A1-201ENST00000337299 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-201ENST00000337299 KIF18AQ8NI77 898 aa15.74■□□□□ 0.11
COL2A1-201ENST00000337299 HDAC1Q13547 482 aaPredicted RBP15.74■□□□□ 0.11
COL2A1-201ENST00000337299 BCL2L12Q9HB09 334 aa15.74■□□□□ 0.11
COL2A1-201ENST00000337299 DTNBO60941 627 aa15.73■□□□□ 0.11
COL2A1-201ENST00000337299 SPATA32Q96LK8 384 aa15.73■□□□□ 0.11
COL2A1-201ENST00000337299 SLC26A8Q96RN1 970 aa15.73■□□□□ 0.11
COL2A1-201ENST00000337299 CNPY2Q9Y2B0 182 aa15.73■□□□□ 0.11
COL2A1-201ENST00000337299 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
COL2A1-201ENST00000337299 ZNF428Q96B54 188 aa15.73■□□□□ 0.11
COL2A1-201ENST00000337299 TMEM63CQ9P1W3 806 aa15.73■□□□□ 0.11
COL2A1-201ENST00000337299 IFIT2P09913 472 aaKnown RBP15.73■□□□□ 0.11
COL2A1-201ENST00000337299 PKP1Q13835 747 aa15.73■□□□□ 0.11
COL2A1-201ENST00000337299 TFIP11Q9UBB9 837 aaKnown RBP15.73■□□□□ 0.11
COL2A1-201ENST00000337299 KDM4AO75164 1064 aa15.72■□□□□ 0.11
COL2A1-201ENST00000337299 PDIA4P13667 645 aaKnown RBP15.72■□□□□ 0.11
COL2A1-201ENST00000337299 IBSPP21815 317 aaPredicted RBP15.72■□□□□ 0.11
COL2A1-201ENST00000337299 PTGS1P23219 599 aa15.72■□□□□ 0.11
COL2A1-201ENST00000337299 FBXO31Q5XUX0 539 aaPredicted RBP15.72■□□□□ 0.11
COL2A1-201ENST00000337299 DHX37Q8IY37 1157 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms