RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 ANKRD50Q9ULJ7 1429 aa9.5□□□□□ -0.89
TNPO1-201ENST00000337273 IPO4Q8TEX9 1081 aaKnown RBP9.5□□□□□ -0.89
TNPO1-201ENST00000337273 SMC2O95347 1197 aa9.5□□□□□ -0.89
TNPO1-201ENST00000337273 EVA1CP58658 441 aa9.5□□□□□ -0.89
TNPO1-201ENST00000337273 INCENPQ9NQS7 918 aa9.5□□□□□ -0.89
TNPO1-201ENST00000337273 GNAI2P04899 355 aa9.5□□□□□ -0.89
TNPO1-201ENST00000337273 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
TNPO1-201ENST00000337273 RIC3Q7Z5B4 369 aa9.5□□□□□ -0.89
TNPO1-201ENST00000337273 PNISRQ8TF01 805 aaKnown RBP9.5□□□□□ -0.89
TNPO1-201ENST00000337273 CASKIN1Q8WXD9 1431 aa9.5□□□□□ -0.89
TNPO1-201ENST00000337273 PTPRGP23470 1445 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 POLR3GO15318 223 aaPredicted RBP9.49□□□□□ -0.89
TNPO1-201ENST00000337273 CDKL5O76039 1030 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 FIBPO43427 364 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 ATAD2BQ9ULI0 1458 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 SERPINC1P01008 464 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 AXDND1Q5T1B0 1012 aaPredicted RBP9.49□□□□□ -0.89
TNPO1-201ENST00000337273 ZSCAN25Q6NSZ9 544 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.891e-6■■□□□ 12
TNPO1-201ENST00000337273 SAMD1Q6SPF0 538 aaPredicted RBP9.49□□□□□ -0.89
TNPO1-201ENST00000337273 PPFIBP1Q86W92 1011 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 KRT32Q14532 448 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 CCDC181Q5TID7 509 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 FSD1Q9BTV5 496 aa9.49□□□□□ -0.89
TNPO1-201ENST00000337273 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
TNPO1-201ENST00000337273 WDR97A6NE52 1622 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 WASHC4Q2M389 1173 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 ZSCAN30Q86W11 494 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 RAPGEF4Q8WZA2 1011 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 TNMDQ9H2S6 317 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
TNPO1-201ENST00000337273 STK3Q13188 491 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 C17orf53Q8N3J3 647 aaPredicted RBP9.48□□□□□ -0.89
TNPO1-201ENST00000337273 FAM107BQ9H098 131 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 PDZRN3Q9UPQ7 1066 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 ESPNB1AK53 854 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 CDK5RAP3Q96JB5 506 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.48□□□□□ -0.89
TNPO1-201ENST00000337273 V9GYY5 206 aaPredicted RBP9.48□□□□□ -0.89
TNPO1-201ENST00000337273 LRRCC1Q9C099 1032 aa9.48□□□□□ -0.89
TNPO1-201ENST00000337273 AEBP2Q6ZN18 517 aaPredicted RBP9.47□□□□□ -0.89
TNPO1-201ENST00000337273 STK38Q15208 465 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 EFCAB5A4FU69 1503 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
TNPO1-201ENST00000337273 TRIM22Q8IYM9 498 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 PPP6R1Q9UPN7 881 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 DEF6Q9H4E7 631 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 DHX29Q7Z478 1369 aaKnown RBP9.47□□□□□ -0.89
TNPO1-201ENST00000337273 FAM170AA1A519 330 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 ATP2B1P20020 1258 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 CENPHQ9H3R5 247 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 CCDC158Q5M9N0 1113 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 TCP11L2Q8N4U5 519 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 MINK1Q8N4C8 1332 aaPredicted RBP9.47□□□□□ -0.89
TNPO1-201ENST00000337273 FANCD2Q9BXW9 1451 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 BCAR3O75815 825 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
TNPO1-201ENST00000337273 NEUROD6Q96NK8 337 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
TNPO1-201ENST00000337273 SPINK5Q9NQ38 1064 aaPredicted RBP9.47□□□□□ -0.89
TNPO1-201ENST00000337273 ADAMTS8Q9UP79 889 aa9.47□□□□□ -0.89
TNPO1-201ENST00000337273 MCM5P33992 734 aa9.46□□□□□ -0.89
TNPO1-201ENST00000337273 CEP57L1Q8IYX8 460 aa9.46□□□□□ -0.89
TNPO1-201ENST00000337273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.46□□□□□ -0.89
TNPO1-201ENST00000337273 RAD21O60216 631 aa9.46□□□□□ -0.89
TNPO1-201ENST00000337273 ZSCAN12O43309 604 aa9.46□□□□□ -0.9
TNPO1-201ENST00000337273 CAMK4Q16566 473 aa9.46□□□□□ -0.9
TNPO1-201ENST00000337273 TWISTNBQ3B726 338 aaPredicted RBP9.46□□□□□ -0.9
TNPO1-201ENST00000337273 MAP9Q49MG5 647 aa9.46□□□□□ -0.9
TNPO1-201ENST00000337273 ATF7IPQ6VMQ6 1270 aa9.46□□□□□ -0.9
TNPO1-201ENST00000337273 WASF1Q92558 559 aa9.46□□□□□ -0.9
TNPO1-201ENST00000337273 PSME1Q06323 249 aa9.46□□□□□ -0.9
TNPO1-201ENST00000337273 MVPQ14764 893 aaKnown RBP9.46□□□□□ -0.9
TNPO1-201ENST00000337273 NCOA2Q15596 1464 aa9.46□□□□□ -0.9
TNPO1-201ENST00000337273 SURF6O75683 361 aaKnown RBP9.45□□□□□ -0.9
TNPO1-201ENST00000337273 EHBP1L1Q8N3D4 1523 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 NOL7Q9UMY1 257 aaKnown RBP9.45□□□□□ -0.9
TNPO1-201ENST00000337273 FYB1O15117 783 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 HMOX1P09601 288 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 PPP2R1AP30153 589 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 NEMFO60524 1076 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 RBM33Q96EV2 1170 aaKnown RBP9.45□□□□□ -0.9
TNPO1-201ENST00000337273 SEPT7Q16181 437 aaKnown RBP9.45□□□□□ -0.9
TNPO1-201ENST00000337273 SMARCA5O60264 1052 aaPredicted RBP9.45□□□□□ -0.9
TNPO1-201ENST00000337273 MTHFSP49914 203 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 WWC2Q6AWC2 1192 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 GON4LQ3T8J9 2241 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 MCM4P33991 863 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 NACAP1Q9BZK3 213 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 CCDC57Q2TAC2 916 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 CEP131Q9UPN4 1083 aa9.45□□□□□ -0.9
TNPO1-201ENST00000337273 UBE2Q2Q8WVN8 375 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 ZFYVE27Q5T4F4 411 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 CHD1LQ86WJ1 897 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 NUP62CLQ9H1M0 184 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 CTNNA3Q9UI47 895 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 TSC1Q92574 1164 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 GAPVD1Q14C86 1478 aa9.44□□□□□ -0.9
TNPO1-201ENST00000337273 BBXQ8WY36 941 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms