RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 PDZRN3Q9UPQ7 1066 aa11.44□□□□□ -0.58
COPB2-201ENST00000333188 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
COPB2-201ENST00000333188 SETD1BQ9UPS6 1966 aaKnown RBP11.44□□□□□ -0.58
COPB2-201ENST00000333188 MPRIPQ6WCQ1 1025 aa11.44□□□□□ -0.58
COPB2-201ENST00000333188 PUS7Q96PZ0 661 aaKnown RBP11.44□□□□□ -0.58
COPB2-201ENST00000333188 TMEM131LA2VDJ0 1609 aa11.43□□□□□ -0.58
COPB2-201ENST00000333188 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
COPB2-201ENST00000333188 NSD2O96028 1365 aa11.43□□□□□ -0.58
COPB2-201ENST00000333188 PPLO60437 1756 aa11.43□□□□□ -0.58
COPB2-201ENST00000333188 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
COPB2-201ENST00000333188 PDE3AQ14432 1141 aa11.42□□□□□ -0.58
COPB2-201ENST00000333188 RTL5Q5HYW3 569 aaPredicted RBP11.42□□□□□ -0.58
COPB2-201ENST00000333188 ZFYVE9O95405 1425 aa11.42□□□□□ -0.58
COPB2-201ENST00000333188 TRMT2AQ8IZ69 625 aaKnown RBP11.42□□□□□ -0.58
COPB2-201ENST00000333188 BACH2Q9BYV9 841 aa11.42□□□□□ -0.58
COPB2-201ENST00000333188 CALD1Q05682 793 aaKnown RBP11.41□□□□□ -0.58
COPB2-201ENST00000333188 LMOD3Q0VAK6 560 aa11.41□□□□□ -0.58
COPB2-201ENST00000333188 FKBP5Q13451 457 aaPredicted RBP11.41□□□□□ -0.58
COPB2-201ENST00000333188 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
COPB2-201ENST00000333188 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
COPB2-201ENST00000333188 IPO9Q96P70 1041 aaKnown RBP11.41□□□□□ -0.58
COPB2-201ENST00000333188 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
COPB2-201ENST00000333188 PTPRUQ92729 1446 aa11.41□□□□□ -0.58
COPB2-201ENST00000333188 LAMC1P11047 1609 aa11.4□□□□□ -0.58
COPB2-201ENST00000333188 AIMP1Q12904 312 aaKnown RBP11.4□□□□□ -0.58
COPB2-201ENST00000333188 KRT28Q7Z3Y7 464 aa11.4□□□□□ -0.58
COPB2-201ENST00000333188 ADAMTS13Q76LX8 1427 aa11.4□□□□□ -0.58
COPB2-201ENST00000333188 TEFQ10587 303 aa11.4□□□□□ -0.58
COPB2-201ENST00000333188 STRN4Q9NRL3 753 aa11.4□□□□□ -0.58
COPB2-201ENST00000333188 DDX19BQ9UMR2 479 aa11.4□□□□□ -0.58
COPB2-201ENST00000333188 VAMP4O75379 141 aa11.39□□□□□ -0.59
COPB2-201ENST00000333188 PIP4K2AP48426 406 aaPredicted RBP11.39□□□□□ -0.59
COPB2-201ENST00000333188 STK31Q9BXU1 1019 aa11.39□□□□□ -0.59
COPB2-201ENST00000333188 EDC4Q6P2E9 1401 aaKnown RBP11.39□□□□□ -0.59
COPB2-201ENST00000333188 PLEKHG1Q9ULL1 1385 aa11.39□□□□□ -0.59
COPB2-201ENST00000333188 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
COPB2-201ENST00000333188 FAM161AQ3B820 660 aa11.39□□□□□ -0.59
COPB2-201ENST00000333188 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
COPB2-201ENST00000333188 UPF2Q9HAU5 1272 aaKnown RBP11.39□□□□□ -0.59
COPB2-201ENST00000333188 SETBP1Q9Y6X0 1596 aa11.39□□□□□ -0.59
COPB2-201ENST00000333188 INSRP06213 1382 aa11.38□□□□□ -0.59
COPB2-201ENST00000333188 SEC24BO95487 1268 aa11.38□□□□□ -0.59
COPB2-201ENST00000333188 ZNF530Q6P9A1 599 aaPredicted RBP11.38□□□□□ -0.59
COPB2-201ENST00000333188 CD163L1Q9NR16 1453 aa11.38□□□□□ -0.59
COPB2-201ENST00000333188 CPS1P31327 1500 aa11.38□□□□□ -0.59
COPB2-201ENST00000333188 CFAP44Q96MT7 982 aa11.38□□□□□ -0.59
COPB2-201ENST00000333188 HOXC9P31274 260 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 MYOM1P52179 1685 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 G2E3Q7L622 706 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 LGR6Q9HBX8 967 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 GCP02774 474 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 MS4A1P11836 297 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
COPB2-201ENST00000333188 KIF16BQ96L93 1317 aa11.36□□□□□ -0.59
COPB2-201ENST00000333188 SMARCA5O60264 1052 aaPredicted RBP11.36□□□□□ -0.59
COPB2-201ENST00000333188 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
COPB2-201ENST00000333188 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
COPB2-201ENST00000333188 KAT6BQ8WYB5 2073 aa11.36□□□□□ -0.59
COPB2-201ENST00000333188 NLRP1Q9C000 1473 aa11.36□□□□□ -0.59
COPB2-201ENST00000333188 IFT57Q9NWB7 429 aa11.35□□□□□ -0.59
COPB2-201ENST00000333188 AGLP35573 1532 aa11.35□□□□□ -0.59
COPB2-201ENST00000333188 KCNQ3O43525 872 aa11.35□□□□□ -0.59
COPB2-201ENST00000333188 SLC39A6Q13433 755 aa11.35□□□□□ -0.59
COPB2-201ENST00000333188 TSHZ3Q63HK5 1081 aa11.35□□□□□ -0.59
COPB2-201ENST00000333188 ARHGEF28Q8N1W1 1705 aaKnown RBP11.35□□□□□ -0.59
COPB2-201ENST00000333188 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
COPB2-201ENST00000333188 DDX54Q8TDD1 881 aaKnown RBP11.34□□□□□ -0.59
COPB2-201ENST00000333188 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
COPB2-201ENST00000333188 GAS2L2Q8NHY3 880 aa11.34□□□□□ -0.59
COPB2-201ENST00000333188 JARID2Q92833 1246 aaPredicted RBP11.34□□□□□ -0.59
COPB2-201ENST00000333188 KIF13AQ9H1H9 1805 aa11.34□□□□□ -0.59
COPB2-201ENST00000333188 USP6P35125 1406 aa11.33□□□□□ -0.6
COPB2-201ENST00000333188 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.6
COPB2-201ENST00000333188 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
COPB2-201ENST00000333188 MRPL50Q8N5N7 158 aaKnown RBP11.33□□□□□ -0.6
COPB2-201ENST00000333188 RAPGEF4Q8WZA2 1011 aa11.33□□□□□ -0.6
COPB2-201ENST00000333188 MEIS3Q99687 375 aa11.33□□□□□ -0.6
COPB2-201ENST00000333188 SPATA31D1Q6ZQQ2 1576 aa11.33□□□□□ -0.6
COPB2-201ENST00000333188 KDM2BQ8NHM5 1336 aa11.33□□□□□ -0.6
COPB2-201ENST00000333188 HSP90AA1P07900 732 aaKnown RBP11.33□□□□□ -0.6
COPB2-201ENST00000333188 MYL6BP14649 208 aa11.33□□□□□ -0.6
COPB2-201ENST00000333188 C16orf71Q8IYS4 520 aaPredicted RBP11.33□□□□□ -0.6
COPB2-201ENST00000333188 KIAA1210Q9ULL0 1709 aa11.32□□□□□ -0.6
COPB2-201ENST00000333188 MYT1Q01538 1121 aa11.32□□□□□ -0.6
COPB2-201ENST00000333188 PHF23Q9BUL5 403 aaPredicted RBP11.32□□□□□ -0.6
COPB2-201ENST00000333188 AXIN2Q9Y2T1 843 aa11.32□□□□□ -0.6
COPB2-201ENST00000333188 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
COPB2-201ENST00000333188 SYTL4Q96C24 671 aaPredicted RBP11.32□□□□□ -0.6
COPB2-201ENST00000333188 EXOC6BQ9Y2D4 811 aa11.32□□□□□ -0.6
COPB2-201ENST00000333188 EVA1CP58658 441 aa11.31□□□□□ -0.6
COPB2-201ENST00000333188 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
COPB2-201ENST00000333188 IL17REQ8NFR9 667 aa11.31□□□□□ -0.6
COPB2-201ENST00000333188 API5Q9BZZ5 524 aaKnown RBP11.31□□□□□ -0.6
COPB2-201ENST00000333188 C19orf44Q9H6X5 657 aa11.31□□□□□ -0.6
COPB2-201ENST00000333188 PHAXQ9H814 394 aaKnown RBP11.31□□□□□ -0.6
COPB2-201ENST00000333188 PRDM11Q9NQV5 511 aa11.31□□□□□ -0.6
COPB2-201ENST00000333188 CPSF1Q10570 1443 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms