RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 EMILIN1Q9Y6C2 1016 aa35.34■■■■□ 3.25
SMDT1-201ENST00000331479 RGPD5Q99666 1765 aa35.34■■■■□ 3.25
SMDT1-201ENST00000331479 MAP2P11137 1827 aaKnown RBP35.34■■■■□ 3.25
SMDT1-201ENST00000331479 ZNF772Q68DY9 489 aaPredicted RBP35.34■■■■□ 3.25
SMDT1-201ENST00000331479 POLKQ9UBT6 870 aa35.33■■■■□ 3.25
SMDT1-201ENST00000331479 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.32■■■■□ 3.24
SMDT1-201ENST00000331479 PEAK1Q9H792 1746 aa35.32■■■■□ 3.24
SMDT1-201ENST00000331479 AMPHP49418 695 aa35.32■■■■□ 3.24
SMDT1-201ENST00000331479 ABCC6O95255 1503 aa35.32■■■■□ 3.24
SMDT1-201ENST00000331479 IP6K1Q92551 441 aa35.31■■■■□ 3.24
SMDT1-201ENST00000331479 STRN4Q9NRL3 753 aa35.3■■■■□ 3.24
SMDT1-201ENST00000331479 COL5A2P05997 1499 aaPredicted RBP35.3■■■■□ 3.24
SMDT1-201ENST00000331479 HOXC9P31274 260 aa35.3■■■■□ 3.24
SMDT1-201ENST00000331479 POTEAQ6S8J7 498 aa35.29■■■■□ 3.24
SMDT1-201ENST00000331479 QTRT2Q9H974 415 aaKnown RBP35.29■■■■□ 3.24
SMDT1-201ENST00000331479 PPM1GO15355 546 aaPredicted RBP35.27■■■■□ 3.24
SMDT1-201ENST00000331479 EVA1CP58658 441 aa35.27■■■■□ 3.24
SMDT1-201ENST00000331479 ATRNO75882 1429 aa35.27■■■■□ 3.24
SMDT1-201ENST00000331479 RTL1A6NKG5 1358 aa35.26■■■■□ 3.23
SMDT1-201ENST00000331479 TRPC5Q9UL62 973 aaPredicted RBP35.25■■■■□ 3.23
SMDT1-201ENST00000331479 BLMP54132 1417 aaPredicted RBP35.25■■■■□ 3.23
SMDT1-201ENST00000331479 FLT4P35916 1363 aa35.24■■■■□ 3.23
SMDT1-201ENST00000331479 HSP90AB2PQ58FF8 381 aa35.24■■■■□ 3.23
SMDT1-201ENST00000331479 LARP1Q6PKG0 1096 aaKnown RBP35.24■■■■□ 3.23
SMDT1-201ENST00000331479 KIF24Q5T7B8 1368 aa35.24■■■■□ 3.23
SMDT1-201ENST00000331479 VPS72Q15906 364 aa35.23■■■■□ 3.23
SMDT1-201ENST00000331479 SMG6Q86US8 1419 aaKnown RBP35.22■■■■□ 3.23
SMDT1-201ENST00000331479 PARD3Q8TEW0 1356 aa35.21■■■■□ 3.23
SMDT1-201ENST00000331479 ANKRD24Q8TF21 1146 aa35.21■■■■□ 3.23
SMDT1-201ENST00000331479 ERBB3P21860 1342 aa35.2■■■■□ 3.23
SMDT1-201ENST00000331479 LTV1Q96GA3 475 aaPredicted RBP35.2■■■■□ 3.23
SMDT1-201ENST00000331479 CCDC9Q9Y3X0 531 aaKnown RBP35.19■■■■□ 3.22
SMDT1-201ENST00000331479 WDR17Q8IZU2 1322 aa35.19■■■■□ 3.22
SMDT1-201ENST00000331479 INSRP06213 1382 aa35.18■■■■□ 3.22
SMDT1-201ENST00000331479 MTHFSP49914 203 aa35.17■■■■□ 3.22
SMDT1-201ENST00000331479 GJD4Q96KN9 370 aaPredicted RBP35.17■■■■□ 3.22
SMDT1-201ENST00000331479 CSB-PGBD3P0DP91 1061 aa35.17■■■■□ 3.22
SMDT1-201ENST00000331479 SPATA31A5Q5VU36 1347 aa35.16■■■■□ 3.22
SMDT1-201ENST00000331479 SPATA31A7Q8IWB4 1347 aa35.16■■■■□ 3.22
SMDT1-201ENST00000331479 GLI3P10071 1580 aa35.15■■■■□ 3.22
SMDT1-201ENST00000331479 PPP2R1AP30153 589 aa35.15■■■■□ 3.22
SMDT1-201ENST00000331479 CRB1P82279 1406 aa35.14■■■■□ 3.22
SMDT1-201ENST00000331479 TOM1L2Q6ZVM7 507 aa35.14■■■■□ 3.22
SMDT1-201ENST00000331479 CDK12Q9NYV4 1490 aaPredicted RBP35.13■■■■□ 3.22
SMDT1-201ENST00000331479 USP35Q9P2H5 1018 aa35.13■■■■□ 3.21
SMDT1-201ENST00000331479 SPATA31A1Q5TZJ5 1347 aa35.13■■■■□ 3.21
SMDT1-201ENST00000331479 RBM6P78332 1123 aaKnown RBP35.13■■■■□ 3.21
SMDT1-201ENST00000331479 RXRBP28702 533 aa35.12■■■■□ 3.21
SMDT1-201ENST00000331479 RALBP1Q15311 655 aa35.12■■■■□ 3.21
SMDT1-201ENST00000331479 PRKRIP1Q9H875 184 aaPredicted RBP35.09■■■■□ 3.21
SMDT1-201ENST00000331479 NLRP2Q9NX02 1062 aa35.08■■■■□ 3.21
SMDT1-201ENST00000331479 RGPD2P0DJD1 1756 aa35.08■■■■□ 3.21
SMDT1-201ENST00000331479 CARD10Q9BWT7 1032 aa35.08■■■■□ 3.21
SMDT1-201ENST00000331479 EIF4A2Q14240 407 aaKnown RBP35.07■■■■□ 3.2
SMDT1-201ENST00000331479 FAM208AQ9UK61 1670 aaKnown RBP35.06■■■■□ 3.2
SMDT1-201ENST00000331479 TCP11L2Q8N4U5 519 aa35.04■■■■□ 3.2
SMDT1-201ENST00000331479 FAM98CQ17RN3 349 aaKnown RBP35.04■■■■□ 3.2
SMDT1-201ENST00000331479 NBPF6Q5VWK0 638 aa35.04■■■■□ 3.2
SMDT1-201ENST00000331479 NBPF4Q96M43 638 aa35.04■■■■□ 3.2
SMDT1-201ENST00000331479 THRAP3Q9Y2W1 955 aaKnown RBP35■■■■□ 3.19
SMDT1-201ENST00000331479 COL3A1P02461 1466 aaPredicted RBP35■■■■□ 3.19
SMDT1-201ENST00000331479 USHBP1Q8N6Y0 703 aa35■■■■□ 3.19
SMDT1-201ENST00000331479 MYBBP1AQ9BQG0 1328 aaKnown RBP34.99■■■■□ 3.19
SMDT1-201ENST00000331479 ONECUT3O60422 494 aaPredicted RBP34.99■■■■□ 3.19
SMDT1-201ENST00000331479 BARGINQ6ZT62 677 aa34.99■■■■□ 3.19
SMDT1-201ENST00000331479 IL13P35225 146 aa34.98■■■■□ 3.19
SMDT1-201ENST00000331479 EYA1Q99502 592 aa34.98■■■■□ 3.19
SMDT1-201ENST00000331479 RGS12O14924 1447 aa34.96■■■■□ 3.19
SMDT1-201ENST00000331479 ANP32CO43423 234 aa34.95■■■■□ 3.18
SMDT1-201ENST00000331479 DIAPH1O60610 1272 aaKnown RBP34.95■■■■□ 3.18
SMDT1-201ENST00000331479 THSD7AQ9UPZ6 1657 aa34.93■■■■□ 3.18
SMDT1-201ENST00000331479 SEPT12Q8IYM1 358 aa34.93■■■■□ 3.18
SMDT1-201ENST00000331479 CFAP53Q96M91 514 aa34.93■■■■□ 3.18
SMDT1-201ENST00000331479 WNK3Q9BYP7 1800 aa34.93■■■■□ 3.18
SMDT1-201ENST00000331479 DISP2A7MBM2 1401 aa34.92■■■■□ 3.18
SMDT1-201ENST00000331479 A0A0G2JS52 829 aa34.91■■■■□ 3.18
SMDT1-201ENST00000331479 MYT1Q01538 1121 aa34.91■■■■□ 3.18
SMDT1-201ENST00000331479 NCAPD2Q15021 1401 aa34.91■■■■□ 3.18
SMDT1-201ENST00000331479 RGPD1P0DJD0 1748 aa34.91■■■■□ 3.18
SMDT1-201ENST00000331479 ILDR2Q71H61 639 aa34.91■■■■□ 3.18
SMDT1-201ENST00000331479 IGSF1Q8N6C5 1336 aa34.91■■■■□ 3.18
SMDT1-201ENST00000331479 IL2RBP14784 551 aa34.87■■■■□ 3.17
SMDT1-201ENST00000331479 PARP4Q9UKK3 1724 aaKnown RBP34.85■■■■□ 3.17
SMDT1-201ENST00000331479 BRWD3Q6RI45 1802 aa34.85■■■■□ 3.17
SMDT1-201ENST00000331479 MEGF6O75095 1541 aa34.85■■■■□ 3.17
SMDT1-201ENST00000331479 AEBP1Q8IUX7 1158 aa34.84■■■■□ 3.17
SMDT1-201ENST00000331479 CDCA7Q9BWT1 371 aaPredicted RBP34.84■■■■□ 3.17
SMDT1-201ENST00000331479 LRRC37A3O60309 1634 aa34.83■■■■□ 3.17
SMDT1-201ENST00000331479 U2SURPO15042 1029 aaKnown RBP34.83■■■■□ 3.17
SMDT1-201ENST00000331479 SULT6B1Q6IMI4 303 aa34.83■■■■□ 3.17
SMDT1-201ENST00000331479 DIEXFQ68CQ4 756 aaKnown RBP34.82■■■■□ 3.16
SMDT1-201ENST00000331479 RAPGEF4Q8WZA2 1011 aa34.8■■■■□ 3.16
SMDT1-201ENST00000331479 HMOX1P09601 288 aa34.79■■■■□ 3.16
SMDT1-201ENST00000331479 DDB1Q16531 1140 aa34.79■■■■□ 3.16
SMDT1-201ENST00000331479 KDRP35968 1356 aa34.79■■■■□ 3.16
SMDT1-201ENST00000331479 NUDCQ9Y266 331 aa34.78■■■■□ 3.16
SMDT1-201ENST00000331479 OVOS2A0A0G2JMS6 1433 aa34.77■■■■□ 3.16
SMDT1-201ENST00000331479 TATP17735 454 aaPredicted RBP34.77■■■■□ 3.16
SMDT1-201ENST00000331479 CCDC184Q52MB2 194 aa34.77■■■■□ 3.16
SMDT1-201ENST00000331479 EXOC5O00471 708 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms