RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CWC27Q6UX04 472 aaKnown RBP16.81■□□□□ 0.28
EPHB3-201ENST00000330394 SMC2O95347 1197 aa16.8■□□□□ 0.28
EPHB3-201ENST00000330394 PPP4R3BQ5MIZ7 849 aa16.8■□□□□ 0.28
EPHB3-201ENST00000330394 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
EPHB3-201ENST00000330394 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
EPHB3-201ENST00000330394 FBLN1P23142 703 aa16.8■□□□□ 0.28
EPHB3-201ENST00000330394 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
EPHB3-201ENST00000330394 CCDC66A2RUB6 948 aa16.79■□□□□ 0.28
EPHB3-201ENST00000330394 HCLS1P14317 486 aaPredicted RBP16.79■□□□□ 0.28
EPHB3-201ENST00000330394 GPS2Q13227 327 aa16.79■□□□□ 0.28
EPHB3-201ENST00000330394 FAM177A1Q8N128 213 aaPredicted RBP16.79■□□□□ 0.28
EPHB3-201ENST00000330394 RASSF8Q8NHQ8 419 aa16.79■□□□□ 0.28
EPHB3-201ENST00000330394 ARGLU1Q9NWB6 273 aaPredicted RBP16.79■□□□□ 0.28
EPHB3-201ENST00000330394 SKIDA1Q1XH10 827 aa16.79■□□□□ 0.28
EPHB3-201ENST00000330394 FSD1Q9BTV5 496 aa16.79■□□□□ 0.28
EPHB3-201ENST00000330394 C16orf45Q96MC5 204 aaPredicted RBP16.79■□□□□ 0.28
EPHB3-201ENST00000330394 TTC12Q9H892 705 aaPredicted RBP16.79■□□□□ 0.28
EPHB3-201ENST00000330394 KINO60870 393 aaKnown RBP16.78■□□□□ 0.28
EPHB3-201ENST00000330394 KRT85P78386 507 aa16.78■□□□□ 0.28
EPHB3-201ENST00000330394 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
EPHB3-201ENST00000330394 NUTM1Q86Y26 1132 aa16.78■□□□□ 0.28
EPHB3-201ENST00000330394 CGNQ9P2M7 1197 aaKnown RBP16.78■□□□□ 0.28
EPHB3-201ENST00000330394 ADCY5O95622 1261 aa16.78■□□□□ 0.28
EPHB3-201ENST00000330394 RPAP2Q8IXW5 612 aaPredicted RBP16.78■□□□□ 0.28
EPHB3-201ENST00000330394 PDILTQ8N807 584 aa16.78■□□□□ 0.28
EPHB3-201ENST00000330394 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
EPHB3-201ENST00000330394 F6X3S4 739 aa16.78■□□□□ 0.28
EPHB3-201ENST00000330394 KIAA0586Q9BVV6 1533 aa16.77■□□□□ 0.28
EPHB3-201ENST00000330394 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
EPHB3-201ENST00000330394 CCDC34Q96HJ3 373 aa16.77■□□□□ 0.28
EPHB3-201ENST00000330394 JAKMIP1Q96N16 626 aaKnown RBP16.77■□□□□ 0.28
EPHB3-201ENST00000330394 CYP46A1Q9Y6A2 500 aa16.77■□□□□ 0.28
EPHB3-201ENST00000330394 FCHSD2O94868 740 aa16.77■□□□□ 0.27
EPHB3-201ENST00000330394 PDCP20941 246 aa16.77■□□□□ 0.27
EPHB3-201ENST00000330394 NUCB1Q02818 461 aa16.77■□□□□ 0.27
EPHB3-201ENST00000330394 CKAP2LQ8IYA6 745 aa16.77■□□□□ 0.27
EPHB3-201ENST00000330394 NUP62CLQ9H1M0 184 aa16.77■□□□□ 0.27
EPHB3-201ENST00000330394 DYNC1I1O14576 645 aa16.76■□□□□ 0.27
EPHB3-201ENST00000330394 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
EPHB3-201ENST00000330394 C16orf71Q8IYS4 520 aaPredicted RBP16.76■□□□□ 0.27
EPHB3-201ENST00000330394 ZGPATQ8N5A5 531 aaKnown RBP16.76■□□□□ 0.27
EPHB3-201ENST00000330394 OFD1O75665 1012 aa16.76■□□□□ 0.27
EPHB3-201ENST00000330394 HDAC1Q13547 482 aaPredicted RBP16.76■□□□□ 0.27
EPHB3-201ENST00000330394 RAB3GAP1Q15042 981 aa16.76■□□□□ 0.27
EPHB3-201ENST00000330394 NFE2L2Q16236 605 aa16.76■□□□□ 0.27
EPHB3-201ENST00000330394 ZKSCAN5Q9Y2L8 839 aa16.76■□□□□ 0.27
EPHB3-201ENST00000330394 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
EPHB3-201ENST00000330394 NOC3LQ8WTT2 800 aaKnown RBP16.75■□□□□ 0.27
EPHB3-201ENST00000330394 MCM10Q7L590 875 aa16.75■□□□□ 0.27
EPHB3-201ENST00000330394 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
EPHB3-201ENST00000330394 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
EPHB3-201ENST00000330394 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
EPHB3-201ENST00000330394 NEXNQ0ZGT2 675 aa16.74■□□□□ 0.27
EPHB3-201ENST00000330394 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
EPHB3-201ENST00000330394 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
EPHB3-201ENST00000330394 LRSAM1Q6UWE0 723 aa16.74■□□□□ 0.27
EPHB3-201ENST00000330394 SPATA32Q96LK8 384 aa16.74■□□□□ 0.27
EPHB3-201ENST00000330394 PSMA5P28066 241 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 SMC5Q8IY18 1101 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 CCDC183Q5T5S1 534 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 CCDC30Q5VVM6 783 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 SRGAP3O43295 1099 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 APPP05067 770 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 GIMAP6Q6P9H5 292 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 UGGT2Q9NYU1 1516 aa16.73■□□□□ 0.27
EPHB3-201ENST00000330394 ALDH1L2Q3SY69 923 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 MAP3K11Q16584 847 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 STK11IPQ8N1F8 1099 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 SNX21Q969T3 373 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 TMX3Q96JJ7 454 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 SIL1Q9H173 461 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 TRMT1Q9NXH9 659 aaKnown RBP16.72■□□□□ 0.27
EPHB3-201ENST00000330394 RALGAPBQ86X10 1494 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 DDX11Q96FC9 970 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 NAT10Q9H0A0 1025 aaKnown RBP16.72■□□□□ 0.27
EPHB3-201ENST00000330394 MX1P20591 662 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 ME1P48163 572 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 HDGFL1Q5TGJ6 251 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 PDRG1Q9NUG6 133 aa16.72■□□□□ 0.27
EPHB3-201ENST00000330394 ATP2B1P20020 1258 aa16.71■□□□□ 0.27
EPHB3-201ENST00000330394 SDSP20132 328 aa16.71■□□□□ 0.27
EPHB3-201ENST00000330394 CCT4P50991 539 aaKnown RBP16.71■□□□□ 0.27
EPHB3-201ENST00000330394 RBSNQ9H1K0 784 aa16.71■□□□□ 0.27
EPHB3-201ENST00000330394 TFIP11Q9UBB9 837 aaKnown RBP16.71■□□□□ 0.27
EPHB3-201ENST00000330394 FAM83GA6ND36 823 aa16.71■□□□□ 0.27
EPHB3-201ENST00000330394 RAPGEF3O95398 923 aa16.71■□□□□ 0.27
EPHB3-201ENST00000330394 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.26
EPHB3-201ENST00000330394 C1orf141Q5JVX7 400 aa16.71■□□□□ 0.26
EPHB3-201ENST00000330394 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.26
EPHB3-201ENST00000330394 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.26
EPHB3-201ENST00000330394 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.26
EPHB3-201ENST00000330394 TNNT1P13805 278 aa16.7■□□□□ 0.26
EPHB3-201ENST00000330394 PDE4CQ08493 712 aa16.7■□□□□ 0.26
EPHB3-201ENST00000330394 GPATCH8Q9UKJ3 1502 aaKnown RBP16.7■□□□□ 0.26
EPHB3-201ENST00000330394 CUL7Q14999 1698 aa16.7■□□□□ 0.26
EPHB3-201ENST00000330394 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
EPHB3-201ENST00000330394 MCM5P33992 734 aa16.7■□□□□ 0.26
EPHB3-201ENST00000330394 EMILIN1Q9Y6C2 1016 aa16.7■□□□□ 0.26
EPHB3-201ENST00000330394 TTC22Q5TAA0 569 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms