RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 CRACR2AQ9BSW2 395 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 SFPQP23246 707 aaKnown RBP eCLIP6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 BMS1Q14692 1282 aaKnown RBP6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 PLEKHH1Q9ULM0 1364 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 ZSCAN12O43309 604 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 FAM193AP78312 1265 aa6.34□□□□□ -1.39
SDR42E1-201ENST00000328945 ERC2O15083 957 aa6.34□□□□□ -1.4
SDR42E1-201ENST00000328945 OFD1O75665 1012 aa6.34□□□□□ -1.4
SDR42E1-201ENST00000328945 PAXIP1Q6ZW49 1069 aaPredicted RBP6.34□□□□□ -1.4
SDR42E1-201ENST00000328945 MTMR7Q9Y216 660 aa6.34□□□□□ -1.4
SDR42E1-201ENST00000328945 PAXBP1Q9Y5B6 917 aa6.34□□□□□ -1.4
SDR42E1-201ENST00000328945 NEK4P51957 841 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 WWC2Q6AWC2 1192 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 SLC26A8Q96RN1 970 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 PDZRN3Q9UPQ7 1066 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 MPNDQ8N594 471 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 PAF1Q8N7H5 531 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 NUMA1Q14980 2115 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 TMEM132AQ24JP5 1023 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 APAF1O14727 1248 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 SPDYE4A6NLX3 237 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 ELL2O00472 640 aaPredicted RBP6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 TICAM2Q86XR7 235 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 FANCD2Q9BXW9 1451 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 CLGNO14967 610 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 XRCC6P12956 609 aaKnown RBP eCLIP6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 FILIP1LQ4L180 1135 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 CCDC183Q5T5S1 534 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 KIAA1328Q86T90 577 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 PPFIBP1Q86W92 1011 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 RASSF4Q9H2L5 321 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 IKQ13123 557 aaPredicted RBP6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 NFXL1Q6ZNB6 911 aa6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 C16orf45Q96MC5 204 aaPredicted RBP6.33□□□□□ -1.4
SDR42E1-201ENST00000328945 RAPGEF2Q9Y4G8 1499 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 SERPINC1P01008 464 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 KRT85P78386 507 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 NUP62CLQ9H1M0 184 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 RBM25P49756 843 aaKnown RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 SAFBQ15424 915 aaKnown RBP eCLIP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 FOSBP53539 338 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 ZNHIT6Q9NWK9 470 aaKnown RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 VGFO15240 615 aaPredicted RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 LMAN1P49257 510 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 ENOX2Q16206 610 aaKnown RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 TTC31Q49AM3 519 aaPredicted RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 JMYQ8N9B5 988 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 RAPGEF4Q8WZA2 1011 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 LUC7LQ9NQ29 371 aaKnown RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 GOLGA6L10A0A0M3HER8 536 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 MAP3K11Q16584 847 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 ARHGAP5Q13017 1502 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 POLR3GO15318 223 aaPredicted RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 ODF2Q5BJF6 829 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 JAKMIP3Q5VZ66 844 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 PROSER2Q86WR7 435 aaPredicted RBP6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 FEZ1Q99689 392 aa6.32□□□□□ -1.4
SDR42E1-201ENST00000328945 AIMP1Q12904 312 aaKnown RBP6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 CCDC181Q5TID7 509 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 IFIT2P09913 472 aaKnown RBP6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 PLCD3Q8N3E9 789 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 RBM28Q9NW13 759 aaKnown RBP6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 CLIP2Q9UDT6 1046 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 TOP2BQ02880 1626 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 WDR97A6NE52 1622 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 FMNL2Q96PY5 1086 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 DACH1Q9UI36 760 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 GBP2P32456 591 aaPredicted RBP6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 ARHGAP29Q52LW3 1261 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 GCC1Q96CN9 775 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 TNPO1Q92973 898 aaKnown RBP6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 OGFRQ9NZT2 677 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 TERF1P54274 439 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 GABPB1Q06547 395 aaPredicted RBP6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 HSP90AB4PQ58FF6 505 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 KLHL40Q2TBA0 621 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 CCDC148Q8NFR7 591 aa6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 RBM42Q9BTD8 480 aaKnown RBP6.31□□□□□ -1.4
SDR42E1-201ENST00000328945 EZRP15311 586 aaKnown RBP6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 CPSF2Q9P2I0 782 aaKnown RBP6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 CCDC171Q6TFL3 1326 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 DDX58O95786 925 aaKnown RBP6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 CAVIN2O95810 425 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 ATP2B2Q01814 1243 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 STK38Q15208 465 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 HSP90AB2PQ58FF8 381 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 SMARCC1Q92922 1105 aaPredicted RBP6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 UPF3BQ9BZI7 483 aaKnown RBP6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 CLASRPQ8N2M8 674 aaKnown RBP6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 A0A1B0GUL7 405 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 G3BP1Q13283 466 aaKnown RBP eCLIP6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 ESCO1Q5FWF5 840 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 RIC3Q7Z5B4 369 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 ABTB2Q8N961 1025 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 RUSC2Q8N2Y8 1516 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 KIF6Q6ZMV9 814 aa6.3□□□□□ -1.4
SDR42E1-201ENST00000328945 KIF21BO75037 1637 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms