RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 NEO1Q92859 1461 aa23.66■■□□□ 1.38
SPSB1-201ENST00000328089 CT47B1P0C2W7 299 aaPredicted RBP23.66■■□□□ 1.38
SPSB1-201ENST00000328089 SIRT2Q8IXJ6 389 aa23.66■■□□□ 1.38
SPSB1-201ENST00000328089 NUCB1Q02818 461 aa23.65■■□□□ 1.38
SPSB1-201ENST00000328089 EIF5BO60841 1220 aaKnown RBP23.65■■□□□ 1.38
SPSB1-201ENST00000328089 OTUD7AQ8TE49 926 aaPredicted RBP23.65■■□□□ 1.38
SPSB1-201ENST00000328089 ZC3H13Q5T200 1668 aaKnown RBP23.64■■□□□ 1.38
SPSB1-201ENST00000328089 F6X3S4 739 aa23.64■■□□□ 1.37
SPSB1-201ENST00000328089 ANTXR1Q9H6X2 564 aa23.64■■□□□ 1.37
SPSB1-201ENST00000328089 AAMPQ13685 434 aa23.63■■□□□ 1.37
SPSB1-201ENST00000328089 ZNF428Q96B54 188 aa23.63■■□□□ 1.37
SPSB1-201ENST00000328089 PRR36Q9H6K5 1346 aa23.62■■□□□ 1.37
SPSB1-201ENST00000328089 NEURL4Q96JN8 1562 aa23.62■■□□□ 1.37
SPSB1-201ENST00000328089 EIF4A2Q14240 407 aaKnown RBP23.62■■□□□ 1.37
SPSB1-201ENST00000328089 CD2BP2O95400 341 aaKnown RBP23.62■■□□□ 1.37
SPSB1-201ENST00000328089 TSHZ3Q63HK5 1081 aa23.61■■□□□ 1.37
SPSB1-201ENST00000328089 IL16Q14005 1332 aa23.61■■□□□ 1.37
SPSB1-201ENST00000328089 ALKQ9UM73 1620 aa23.6■■□□□ 1.37
SPSB1-201ENST00000328089 ALDH1L2Q3SY69 923 aa23.6■■□□□ 1.37
SPSB1-201ENST00000328089 ACEP12821 1306 aa23.6■■□□□ 1.37
SPSB1-201ENST00000328089 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
SPSB1-201ENST00000328089 NGDNQ8NEJ9 315 aaKnown RBP23.59■■□□□ 1.37
SPSB1-201ENST00000328089 CFAP44Q96MT7 982 aa23.59■■□□□ 1.37
SPSB1-201ENST00000328089 COL3A1P02461 1466 aaPredicted RBP23.59■■□□□ 1.37
SPSB1-201ENST00000328089 TBC1D9Q6ZT07 1266 aa23.59■■□□□ 1.37
SPSB1-201ENST00000328089 SLC4A2P04920 1241 aa23.58■■□□□ 1.37
SPSB1-201ENST00000328089 ARHGAP31Q2M1Z3 1444 aa23.58■■□□□ 1.37
SPSB1-201ENST00000328089 IFT57Q9NWB7 429 aa23.58■■□□□ 1.37
SPSB1-201ENST00000328089 ARHGEF40Q8TER5 1519 aa23.58■■□□□ 1.37
SPSB1-201ENST00000328089 LRRC7Q96NW7 1537 aa23.57■■□□□ 1.36
SPSB1-201ENST00000328089 PANK2Q9BZ23 570 aa23.57■■□□□ 1.36
SPSB1-201ENST00000328089 PNPLA6Q8IY17 1366 aa23.57■■□□□ 1.36
SPSB1-201ENST00000328089 LTKP29376 864 aa23.56■■□□□ 1.36
SPSB1-201ENST00000328089 MCM4P33991 863 aa23.56■■□□□ 1.36
SPSB1-201ENST00000328089 CALD1Q05682 793 aaKnown RBP23.56■■□□□ 1.36
SPSB1-201ENST00000328089 MEIS3Q99687 375 aa23.55■■□□□ 1.36
SPSB1-201ENST00000328089 FOXD4L5Q5VV16 416 aaPredicted RBP23.55■■□□□ 1.36
SPSB1-201ENST00000328089 FOXD4L4Q8WXT5 416 aaPredicted RBP23.55■■□□□ 1.36
SPSB1-201ENST00000328089 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
SPSB1-201ENST00000328089 AMPHP49418 695 aa23.55■■□□□ 1.36
SPSB1-201ENST00000328089 TPRNQ4KMQ1 711 aa23.54■■□□□ 1.36
SPSB1-201ENST00000328089 NOL8Q76FK4 1167 aaKnown RBP23.53■■□□□ 1.36
SPSB1-201ENST00000328089 G2E3Q7L622 706 aa23.53■■□□□ 1.36
SPSB1-201ENST00000328089 CHMP5Q9NZZ3 219 aa23.53■■□□□ 1.36
SPSB1-201ENST00000328089 CFAP74Q9C0B2 1584 aa23.53■■□□□ 1.36
SPSB1-201ENST00000328089 TMEM131LA2VDJ0 1609 aa23.53■■□□□ 1.36
SPSB1-201ENST00000328089 USHBP1Q8N6Y0 703 aa23.53■■□□□ 1.36
SPSB1-201ENST00000328089 ZFYVE9O95405 1425 aa23.52■■□□□ 1.36
SPSB1-201ENST00000328089 A2ML1A8K2U0 1454 aa23.52■■□□□ 1.36
SPSB1-201ENST00000328089 TRAK2O60296 914 aa23.52■■□□□ 1.36
SPSB1-201ENST00000328089 FAM135BQ49AJ0 1406 aa23.52■■□□□ 1.36
SPSB1-201ENST00000328089 RTF1Q92541 710 aaKnown RBP23.52■■□□□ 1.36
SPSB1-201ENST00000328089 TSPYL4Q9UJ04 414 aa23.51■■□□□ 1.35
SPSB1-201ENST00000328089 TTC21BQ7Z4L5 1316 aa23.51■■□□□ 1.35
SPSB1-201ENST00000328089 API5Q9BZZ5 524 aaKnown RBP23.5■■□□□ 1.35
SPSB1-201ENST00000328089 ROBO2Q9HCK4 1378 aa23.5■■□□□ 1.35
SPSB1-201ENST00000328089 LMOD3Q0VAK6 560 aa23.5■■□□□ 1.35
SPSB1-201ENST00000328089 GSPT1P15170 499 aaKnown RBP23.49■■□□□ 1.35
SPSB1-201ENST00000328089 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.49■■□□□ 1.35
SPSB1-201ENST00000328089 EXOC6BQ9Y2D4 811 aa23.48■■□□□ 1.35
SPSB1-201ENST00000328089 CPS1P31327 1500 aa23.48■■□□□ 1.35
SPSB1-201ENST00000328089 GCC1Q96CN9 775 aa23.48■■□□□ 1.35
SPSB1-201ENST00000328089 NLRP6P59044 892 aa23.48■■□□□ 1.35
SPSB1-201ENST00000328089 PREX1Q8TCU6 1659 aa23.47■■□□□ 1.35
SPSB1-201ENST00000328089 ZNF853P0CG23 659 aa23.47■■□□□ 1.35
SPSB1-201ENST00000328089 NCLP19338 710 aaKnown RBP23.47■■□□□ 1.35
SPSB1-201ENST00000328089 MTHFSDQ2M296 383 aaKnown RBP23.47■■□□□ 1.35
SPSB1-201ENST00000328089 BMP2KLQ5H9B9 411 aa23.47■■□□□ 1.35
SPSB1-201ENST00000328089 GOLGA6L3A6NEY3 463 aa23.46■■□□□ 1.35
SPSB1-201ENST00000328089 HDGFP51858 240 aaKnown RBP23.46■■□□□ 1.35
SPSB1-201ENST00000328089 ADGRB2O60241 1585 aa23.46■■□□□ 1.35
SPSB1-201ENST00000328089 AMOTL2Q9Y2J4 779 aa23.46■■□□□ 1.35
SPSB1-201ENST00000328089 LMOD2Q6P5Q4 547 aa23.46■■□□□ 1.35
SPSB1-201ENST00000328089 TNPO1Q92973 898 aaKnown RBP23.46■■□□□ 1.35
SPSB1-201ENST00000328089 CHAMP1Q96JM3 812 aa23.45■■□□□ 1.34
SPSB1-201ENST00000328089 FOXD4L6Q3SYB3 417 aaPredicted RBP23.45■■□□□ 1.34
SPSB1-201ENST00000328089 FOXD4L3Q6VB84 417 aaPredicted RBP23.45■■□□□ 1.34
SPSB1-201ENST00000328089 EDC4Q6P2E9 1401 aaKnown RBP23.44■■□□□ 1.34
SPSB1-201ENST00000328089 PLEKHM2Q8IWE5 1019 aa23.44■■□□□ 1.34
SPSB1-201ENST00000328089 ZNF692Q9BU19 519 aaPredicted RBP23.44■■□□□ 1.34
SPSB1-201ENST00000328089 MAP3K19Q56UN5 1328 aa23.43■■□□□ 1.34
SPSB1-201ENST00000328089 FKBP5Q13451 457 aaPredicted RBP23.43■■□□□ 1.34
SPSB1-201ENST00000328089 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
SPSB1-201ENST00000328089 RICTORQ6R327 1708 aa23.43■■□□□ 1.34
SPSB1-201ENST00000328089 XRCC6P12956 609 aaKnown RBP eCLIP23.42■■□□□ 1.34
SPSB1-201ENST00000328089 SSFA2P28290 1259 aa23.42■■□□□ 1.34
SPSB1-201ENST00000328089 ABCC4O15439 1325 aa23.42■■□□□ 1.34
SPSB1-201ENST00000328089 EIF2S2P20042 333 aaKnown RBP23.42■■□□□ 1.34
SPSB1-201ENST00000328089 KIF2CQ99661 725 aa23.42■■□□□ 1.34
SPSB1-201ENST00000328089 MAP2P11137 1827 aaKnown RBP23.41■■□□□ 1.34
SPSB1-201ENST00000328089 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
SPSB1-201ENST00000328089 CDC45O75419 566 aa23.41■■□□□ 1.34
SPSB1-201ENST00000328089 NCBP3Q53F19 620 aaKnown RBP23.41■■□□□ 1.34
SPSB1-201ENST00000328089 MSH6P52701 1360 aa23.4■■□□□ 1.34
SPSB1-201ENST00000328089 XPCQ01831 940 aaPredicted RBP23.4■■□□□ 1.34
SPSB1-201ENST00000328089 ARHGAP45Q92619 1136 aa23.4■■□□□ 1.34
SPSB1-201ENST00000328089 DTNBO60941 627 aa23.39■■□□□ 1.34
SPSB1-201ENST00000328089 CEP85Q6P2H3 762 aa23.39■■□□□ 1.33
SPSB1-201ENST00000328089 EYA1Q99502 592 aa23.39■■□□□ 1.33
SPSB1-201ENST00000328089 CHMP4BQ9H444 224 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms