RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CWC22Q9HCG8 908 aaKnown RBP15.73■□□□□ 0.11
CCDC60-201ENST00000327554 ZHX1Q9UKY1 873 aaPredicted RBP15.73■□□□□ 0.11
CCDC60-201ENST00000327554 NSFL1CQ9UNZ2 370 aaKnown RBP15.73■□□□□ 0.11
CCDC60-201ENST00000327554 PIK3R4Q99570 1358 aa15.73■□□□□ 0.11
CCDC60-201ENST00000327554 ZSCAN20P17040 1043 aaPredicted RBP15.72■□□□□ 0.11
CCDC60-201ENST00000327554 BRPF1P55201 1214 aaPredicted RBP15.72■□□□□ 0.11
CCDC60-201ENST00000327554 ZGPATQ8N5A5 531 aaKnown RBP15.72■□□□□ 0.11
CCDC60-201ENST00000327554 TRAK1Q9UPV9 953 aa15.72■□□□□ 0.11
CCDC60-201ENST00000327554 ADGRB1O14514 1584 aa15.71■□□□□ 0.11
CCDC60-201ENST00000327554 MYRIPQ8NFW9 859 aa15.71■□□□□ 0.11
CCDC60-201ENST00000327554 USP26Q9BXU7 913 aa15.71■□□□□ 0.11
CCDC60-201ENST00000327554 U2SURPO15042 1029 aaKnown RBP15.71■□□□□ 0.1
CCDC60-201ENST00000327554 CHAMP1Q96JM3 812 aa15.71■□□□□ 0.1
CCDC60-201ENST00000327554 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
CCDC60-201ENST00000327554 EFCAB2Q5VUJ9 269 aa15.7■□□□□ 0.1
CCDC60-201ENST00000327554 ANKRD36BQ8N2N9 1353 aa15.7■□□□□ 0.1
CCDC60-201ENST00000327554 PTCH1Q13635 1447 aa15.7■□□□□ 0.1
CCDC60-201ENST00000327554 MROH1Q8NDA8 1641 aa15.7■□□□□ 0.1
CCDC60-201ENST00000327554 KNDC1Q76NI1 1749 aa15.7■□□□□ 0.1
CCDC60-201ENST00000327554 KIAA2012Q0VF49 1180 aa15.69■□□□□ 0.1
CCDC60-201ENST00000327554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC60-201ENST00000327554 PLEKHM2Q8IWE5 1019 aa15.69■□□□□ 0.1
CCDC60-201ENST00000327554 ZNF710Q8N1W2 664 aa15.69■□□□□ 0.1
CCDC60-201ENST00000327554 PPLO60437 1756 aa15.69■□□□□ 0.1
CCDC60-201ENST00000327554 JARID2Q92833 1246 aaPredicted RBP15.68■□□□□ 0.1
CCDC60-201ENST00000327554 TULP4Q9NRJ4 1543 aa15.68■□□□□ 0.1
CCDC60-201ENST00000327554 A0A0U1RQG5 324 aaPredicted RBP15.68■□□□□ 0.1
CCDC60-201ENST00000327554 RNF214Q8ND24 703 aa15.68■□□□□ 0.1
CCDC60-201ENST00000327554 ADGRB3O60242 1522 aa15.67■□□□□ 0.1
CCDC60-201ENST00000327554 CHMP4BQ9H444 224 aaKnown RBP15.67■□□□□ 0.1
CCDC60-201ENST00000327554 ANKRD26Q9UPS8 1709 aa15.67■□□□□ 0.1
CCDC60-201ENST00000327554 TTC22Q5TAA0 569 aa15.67■□□□□ 0.1
CCDC60-201ENST00000327554 MRPL50Q8N5N7 158 aaKnown RBP15.66■□□□□ 0.1
CCDC60-201ENST00000327554 ARHGAP45Q92619 1136 aa15.66■□□□□ 0.1
CCDC60-201ENST00000327554 EFCAB6Q5THR3 1501 aa15.66■□□□□ 0.1
CCDC60-201ENST00000327554 MBD3O95983 291 aa15.66■□□□□ 0.1
CCDC60-201ENST00000327554 GTF2F1P35269 517 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCDC60-201ENST00000327554 ZNF428Q96B54 188 aa15.66■□□□□ 0.1
CCDC60-201ENST00000327554 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
CCDC60-201ENST00000327554 AFAP1Q8N556 730 aa15.65■□□□□ 0.1
CCDC60-201ENST00000327554 TSC1Q92574 1164 aa15.65■□□□□ 0.1
CCDC60-201ENST00000327554 PRIMPOLQ96LW4 560 aa15.65■□□□□ 0.1
CCDC60-201ENST00000327554 ABCC4O15439 1325 aa15.65■□□□□ 0.1
CCDC60-201ENST00000327554 ARHGEF28Q8N1W1 1705 aaKnown RBP15.65■□□□□ 0.1
CCDC60-201ENST00000327554 ST18O60284 1047 aa15.65■□□□□ 0.1
CCDC60-201ENST00000327554 C14orf93Q9H972 538 aaKnown RBP15.65■□□□□ 0.1
CCDC60-201ENST00000327554 PTMAP06454 111 aaKnown RBP15.64■□□□□ 0.09
CCDC60-201ENST00000327554 INTS3Q68E01 1043 aaKnown RBP15.63■□□□□ 0.09
CCDC60-201ENST00000327554 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
CCDC60-201ENST00000327554 TSPY26PQ9H489 355 aa15.63■□□□□ 0.09
CCDC60-201ENST00000327554 HMGN5P82970 282 aaKnown RBP15.63■□□□□ 0.09
CCDC60-201ENST00000327554 PIBF1Q8WXW3 757 aa15.63■□□□□ 0.09
CCDC60-201ENST00000327554 ATP7AQ04656 1500 aa15.63■□□□□ 0.09
CCDC60-201ENST00000327554 LRRC7Q96NW7 1537 aa15.63■□□□□ 0.09
CCDC60-201ENST00000327554 VAMP4O75379 141 aa15.62■□□□□ 0.09
CCDC60-201ENST00000327554 TMEM132EQ6IEE7 984 aa15.62■□□□□ 0.09
CCDC60-201ENST00000327554 FANCAO15360 1455 aa15.62■□□□□ 0.09
CCDC60-201ENST00000327554 GLI2P10070 1586 aa15.62■□□□□ 0.09
CCDC60-201ENST00000327554 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
CCDC60-201ENST00000327554 KIF3BO15066 747 aa15.61■□□□□ 0.09
CCDC60-201ENST00000327554 DNTTIP2Q5QJE6 756 aaKnown RBP15.61■□□□□ 0.09
CCDC60-201ENST00000327554 GTPBP4Q9BZE4 634 aaKnown RBP15.61■□□□□ 0.09
CCDC60-201ENST00000327554 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
CCDC60-201ENST00000327554 CDC42BPGQ6DT37 1551 aa15.61■□□□□ 0.09
CCDC60-201ENST00000327554 EVC2Q86UK5 1308 aa15.61■□□□□ 0.09
CCDC60-201ENST00000327554 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
CCDC60-201ENST00000327554 CBX1P83916 185 aa15.6■□□□□ 0.09
CCDC60-201ENST00000327554 NOLC1Q14978 699 aaKnown RBP eCLIP15.6■□□□□ 0.09
CCDC60-201ENST00000327554 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
CCDC60-201ENST00000327554 FOXD4L5Q5VV16 416 aaPredicted RBP15.6■□□□□ 0.09
CCDC60-201ENST00000327554 FOXD4L4Q8WXT5 416 aaPredicted RBP15.6■□□□□ 0.09
CCDC60-201ENST00000327554 YEATS2Q9ULM3 1422 aa15.6■□□□□ 0.09
CCDC60-201ENST00000327554 A0A1W2PP64 1363 aa15.6■□□□□ 0.09
CCDC60-201ENST00000327554 TSPYL6Q8N831 410 aa15.6■□□□□ 0.09
CCDC60-201ENST00000327554 GGNBP2Q9H3C7 697 aa15.6■□□□□ 0.09
CCDC60-201ENST00000327554 ZCCHC11Q5TAX3 1644 aaKnown RBP15.6■□□□□ 0.09
CCDC60-201ENST00000327554 BRD1O95696 1058 aa15.59■□□□□ 0.09
CCDC60-201ENST00000327554 SDSP20132 328 aa15.59■□□□□ 0.09
CCDC60-201ENST00000327554 OTUD7AQ8TE49 926 aaPredicted RBP15.59■□□□□ 0.09
CCDC60-201ENST00000327554 ZNF830Q96NB3 372 aaPredicted RBP15.59■□□□□ 0.09
CCDC60-201ENST00000327554 ATAD2Q6PL18 1390 aa15.58■□□□□ 0.08
CCDC60-201ENST00000327554 PPP4R3BQ5MIZ7 849 aa15.58■□□□□ 0.08
CCDC60-201ENST00000327554 MPNDQ8N594 471 aa15.58■□□□□ 0.08
CCDC60-201ENST00000327554 CABP2Q9NPB3 220 aa15.58■□□□□ 0.08
CCDC60-201ENST00000327554 SPTLC3Q9NUV7 552 aa15.58■□□□□ 0.08
CCDC60-201ENST00000327554 PNPLA6Q8IY17 1366 aa15.58■□□□□ 0.08
CCDC60-201ENST00000327554 TCHHQ07283 1943 aa15.58■□□□□ 0.08
CCDC60-201ENST00000327554 FAM135BQ49AJ0 1406 aa15.57■□□□□ 0.08
CCDC60-201ENST00000327554 ARAP3Q8WWN8 1544 aa15.57■□□□□ 0.08
CCDC60-201ENST00000327554 DIAPH1O60610 1272 aaKnown RBP15.57■□□□□ 0.08
CCDC60-201ENST00000327554 KIF20AO95235 890 aa15.57■□□□□ 0.08
CCDC60-201ENST00000327554 FKBP5Q13451 457 aaPredicted RBP15.57■□□□□ 0.08
CCDC60-201ENST00000327554 C17orf53Q8N3J3 647 aaPredicted RBP15.57■□□□□ 0.08
CCDC60-201ENST00000327554 TMX3Q96JJ7 454 aa15.57■□□□□ 0.08
CCDC60-201ENST00000327554 KIF3AQ9Y496 699 aa15.57■□□□□ 0.08
CCDC60-201ENST00000327554 FAM177BA6PVY3 158 aa15.56■□□□□ 0.08
CCDC60-201ENST00000327554 UVSSAQ2YD98 709 aa15.56■□□□□ 0.08
CCDC60-201ENST00000327554 SYAP1Q96A49 352 aaPredicted RBP15.56■□□□□ 0.08
CCDC60-201ENST00000327554 ATP10DQ9P241 1426 aa15.56■□□□□ 0.08
CCDC60-201ENST00000327554 TTC12Q9H892 705 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms