RNA–Protein interactions for RNA: ENST00000324767.11

SCAPER-202, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAPER, Length 4,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-202ENST00000324767 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
SCAPER-202ENST00000324767 SLKQ9H2G2 1235 aaPredicted RBP9.47□□□□□ -0.89
SCAPER-202ENST00000324767 POLR3AO14802 1390 aaPredicted RBP9.47□□□□□ -0.89
SCAPER-202ENST00000324767 AKAP17AQ02040 695 aaKnown RBP9.47□□□□□ -0.89
SCAPER-202ENST00000324767 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
SCAPER-202ENST00000324767 DDX54Q8TDD1 881 aaKnown RBP9.47□□□□□ -0.89
SCAPER-202ENST00000324767 TPM4P67936 248 aa9.46□□□□□ -0.89
SCAPER-202ENST00000324767 PARD3Q8TEW0 1356 aa9.46□□□□□ -0.89
SCAPER-202ENST00000324767 PIK3C2GO75747 1445 aa9.46□□□□□ -0.89
SCAPER-202ENST00000324767 TEX13AQ9BXU3 409 aaPredicted RBP9.46□□□□□ -0.89
SCAPER-202ENST00000324767 EMILIN1Q9Y6C2 1016 aa9.46□□□□□ -0.89
SCAPER-202ENST00000324767 FAM184AQ8NB25 1140 aa9.46□□□□□ -0.9
SCAPER-202ENST00000324767 NPATQ14207 1427 aa9.46□□□□□ -0.9
SCAPER-202ENST00000324767 ZCCHC11Q5TAX3 1644 aaKnown RBP9.46□□□□□ -0.9
SCAPER-202ENST00000324767 SKOR2Q2VWA4 1001 aaPredicted RBP9.46□□□□□ -0.9
SCAPER-202ENST00000324767 SPRYD3Q8NCJ5 442 aa9.46□□□□□ -0.9
SCAPER-202ENST00000324767 TBC1D2BQ9UPU7 963 aa9.46□□□□□ -0.9
SCAPER-202ENST00000324767 FANCIQ9NVI1 1328 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 COL17A1Q9UMD9 1497 aaPredicted RBP9.45□□□□□ -0.9
SCAPER-202ENST00000324767 FYB1O15117 783 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 CCDC27Q2M243 656 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 ANO2Q9NQ90 1003 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 TOM1O60784 492 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
SCAPER-202ENST00000324767 SAMD9LQ8IVG5 1584 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 MCM2P49736 904 aa9.45□□□□□ -0.9
SCAPER-202ENST00000324767 NUTM2BA6NNL0 878 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-202ENST00000324767 NUTM2EB1AL46 878 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-202ENST00000324767 PSMA5P28066 241 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 CCDC184Q52MB2 194 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 DUSP27Q5VZP5 1158 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 LARP1Q6PKG0 1096 aaKnown RBP9.44□□□□□ -0.9
SCAPER-202ENST00000324767 NUTM2AQ8IVF1 878 aaPredicted RBP9.44□□□□□ -0.9
SCAPER-202ENST00000324767 GNL3LQ9NVN8 582 aaKnown RBP9.44□□□□□ -0.9
SCAPER-202ENST00000324767 PTPRCP08575 1304 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 SBNO2Q9Y2G9 1366 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 SF3B2Q13435 895 aaKnown RBP9.44□□□□□ -0.9
SCAPER-202ENST00000324767 IFNL2Q8IZJ0 200 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 BCAR3O75815 825 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 HSP90AB3PQ58FF7 597 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 NEUROD6Q96NK8 337 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 TMOD3Q9NYL9 352 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 H3BQV1 296 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 IFFO2Q5TF58 517 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 LRRCC1Q9C099 1032 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 ZNF652Q9Y2D9 606 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 FLT4P35916 1363 aa9.44□□□□□ -0.9
SCAPER-202ENST00000324767 TPRNQ4KMQ1 711 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 TRIM34Q9BYJ4 488 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 TMEM2Q9UHN6 1383 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 ERICH2A1L162 156 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 CCDC158Q5M9N0 1113 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 DNTTIP2Q5QJE6 756 aaKnown RBP9.43□□□□□ -0.9
SCAPER-202ENST00000324767 HYPKQ9NX55 129 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 ADCY10Q96PN6 1610 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 SOS1Q07889 1333 aaPredicted RBP9.43□□□□□ -0.9
SCAPER-202ENST00000324767 APPP05067 770 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 KCNA6P17658 529 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 NUCB2P80303 420 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 SF3A1Q15459 793 aaKnown RBP9.43□□□□□ -0.9
SCAPER-202ENST00000324767 C22orf23Q9BZE7 217 aa9.43□□□□□ -0.9
SCAPER-202ENST00000324767 DBF4Q9UBU7 674 aaPredicted RBP9.43□□□□□ -0.9
SCAPER-202ENST00000324767 RARSP54136 660 aaKnown RBP9.42□□□□□ -0.9
SCAPER-202ENST00000324767 TRIM29Q14134 588 aa9.42□□□□□ -0.9
SCAPER-202ENST00000324767 RALYLQ86SE5 291 aaKnown RBP9.42□□□□□ -0.9
SCAPER-202ENST00000324767 HECW2Q9P2P5 1572 aa9.42□□□□□ -0.9
SCAPER-202ENST00000324767 CPLX1O14810 134 aa9.42□□□□□ -0.9
SCAPER-202ENST00000324767 FMNL2Q96PY5 1086 aa9.42□□□□□ -0.9
SCAPER-202ENST00000324767 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
SCAPER-202ENST00000324767 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
SCAPER-202ENST00000324767 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCAPER-202ENST00000324767 TTC37Q6PGP7 1564 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 EXOC5O00471 708 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 CCDC57Q2TAC2 916 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 FSD1Q9BTV5 496 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 CHMP5Q9NZZ3 219 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
SCAPER-202ENST00000324767 INSRP06213 1382 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 RAB11FIP3O75154 756 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 NCBP3Q53F19 620 aaKnown RBP9.41□□□□□ -0.9
SCAPER-202ENST00000324767 ARHGAP45Q92619 1136 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 CHAF1AQ13111 956 aaPredicted RBP9.41□□□□□ -0.9
SCAPER-202ENST00000324767 ANKRD24Q8TF21 1146 aa9.41□□□□□ -0.9
SCAPER-202ENST00000324767 PLXNC1O60486 1568 aa9.4□□□□□ -0.9
SCAPER-202ENST00000324767 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
SCAPER-202ENST00000324767 MCM10Q7L590 875 aa9.4□□□□□ -0.9
SCAPER-202ENST00000324767 SART3Q15020 963 aaKnown RBP9.4□□□□□ -0.91
SCAPER-202ENST00000324767 WASHC4Q2M389 1173 aa9.4□□□□□ -0.91
SCAPER-202ENST00000324767 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.91
SCAPER-202ENST00000324767 RABEP1Q15276 862 aa9.39□□□□□ -0.91
SCAPER-202ENST00000324767 IL27Q8NEV9 243 aa9.39□□□□□ -0.91
SCAPER-202ENST00000324767 PHF23Q9BUL5 403 aaPredicted RBP9.39□□□□□ -0.91
SCAPER-202ENST00000324767 MYOM2P54296 1465 aa9.39□□□□□ -0.91
SCAPER-202ENST00000324767 SLC3A2P08195 630 aaKnown RBP9.39□□□□□ -0.91
SCAPER-202ENST00000324767 MSNP26038 577 aaKnown RBP9.39□□□□□ -0.91
SCAPER-202ENST00000324767 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
SCAPER-202ENST00000324767 MPHOSPH8Q99549 860 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms