RNA–Protein interactions for RNA: ENST00000321517.3

LINC00476-201, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 1,269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-201ENST00000321517 CARD11Q9BXL7 1154 aa23.29■■□□□ 1.32
LINC00476-201ENST00000321517 KTN1Q86UP2 1357 aaKnown RBP23.28■■□□□ 1.32
LINC00476-201ENST00000321517 PTF1AQ7RTS3 328 aa23.28■■□□□ 1.32
LINC00476-201ENST00000321517 WDR17Q8IZU2 1322 aa23.28■■□□□ 1.32
LINC00476-201ENST00000321517 TTC21AQ8NDW8 1320 aa23.28■■□□□ 1.32
LINC00476-201ENST00000321517 PEAK1Q9H792 1746 aa23.27■■□□□ 1.32
LINC00476-201ENST00000321517 CD163L1Q9NR16 1453 aa23.26■■□□□ 1.31
LINC00476-201ENST00000321517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.26■■□□□ 1.31
LINC00476-201ENST00000321517 KCNH5Q8NCM2 988 aa23.26■■□□□ 1.31
LINC00476-201ENST00000321517 SBNO2Q9Y2G9 1366 aa23.26■■□□□ 1.31
LINC00476-201ENST00000321517 NFAT5O94916 1531 aa23.25■■□□□ 1.31
LINC00476-201ENST00000321517 SLC12A5Q9H2X9 1139 aa23.25■■□□□ 1.31
LINC00476-201ENST00000321517 RREB1Q92766 1687 aa23.25■■□□□ 1.31
LINC00476-201ENST00000321517 PARD3Q8TEW0 1356 aa23.25■■□□□ 1.31
LINC00476-201ENST00000321517 LRRC37A3O60309 1634 aa23.24■■□□□ 1.31
LINC00476-201ENST00000321517 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
LINC00476-201ENST00000321517 DDB1Q16531 1140 aa23.24■■□□□ 1.31
LINC00476-201ENST00000321517 NME9Q86XW9 330 aa23.24■■□□□ 1.31
LINC00476-201ENST00000321517 MARCH10Q8NA82 808 aaPredicted RBP23.24■■□□□ 1.31
LINC00476-201ENST00000321517 NUP188Q5SRE5 1749 aa23.23■■□□□ 1.31
LINC00476-201ENST00000321517 MON2Q7Z3U7 1717 aa23.22■■□□□ 1.31
LINC00476-201ENST00000321517 SBF2Q86WG5 1849 aa23.22■■□□□ 1.31
LINC00476-201ENST00000321517 CARD10Q9BWT7 1032 aa23.22■■□□□ 1.31
LINC00476-201ENST00000321517 TMC1Q8TDI8 760 aa23.21■■□□□ 1.31
LINC00476-201ENST00000321517 USP31Q70CQ4 1352 aa23.21■■□□□ 1.31
LINC00476-201ENST00000321517 OVOS2A0A0G2JMS6 1433 aa23.21■■□□□ 1.31
LINC00476-201ENST00000321517 OVOS2A0A0J9YW53 1432 aa23.21■■□□□ 1.31
LINC00476-201ENST00000321517 OVOS2Q6IE36 1432 aa23.21■■□□□ 1.31
LINC00476-201ENST00000321517 CSB-PGBD3P0DP91 1061 aa23.2■■□□□ 1.3
LINC00476-201ENST00000321517 WNK3Q9BYP7 1800 aa23.19■■□□□ 1.3
LINC00476-201ENST00000321517 PROM2Q8N271 834 aa23.17■■□□□ 1.3
LINC00476-201ENST00000321517 C11orf95C9JLR9 678 aaPredicted RBP23.16■■□□□ 1.3
LINC00476-201ENST00000321517 PLSCR1O15162 318 aa23.16■■□□□ 1.3
LINC00476-201ENST00000321517 NBPF14Q5TI25 921 aa23.16■■□□□ 1.3
LINC00476-201ENST00000321517 TESK2Q96S53 571 aa23.16■■□□□ 1.3
LINC00476-201ENST00000321517 BCL11BQ9C0K0 894 aaPredicted RBP23.16■■□□□ 1.3
LINC00476-201ENST00000321517 CDCA7Q9BWT1 371 aaPredicted RBP23.15■■□□□ 1.3
LINC00476-201ENST00000321517 EIF4G2P78344 907 aaKnown RBP eCLIP23.14■■□□□ 1.29
LINC00476-201ENST00000321517 A0A1W2PP64 1363 aa23.14■■□□□ 1.29
LINC00476-201ENST00000321517 USP54Q70EL1 1684 aa23.13■■□□□ 1.29
LINC00476-201ENST00000321517 ST20-MTHFSA0A0A6YYL1 179 aa23.13■■□□□ 1.29
LINC00476-201ENST00000321517 EXOC5O00471 708 aa23.13■■□□□ 1.29
LINC00476-201ENST00000321517 HDGFL2Q7Z4V5 671 aaPredicted RBP23.13■■□□□ 1.29
LINC00476-201ENST00000321517 ANO8Q9HCE9 1232 aaPredicted RBP23.13■■□□□ 1.29
LINC00476-201ENST00000321517 USP47Q96K76 1375 aa23.13■■□□□ 1.29
LINC00476-201ENST00000321517 BCL9O00512 1426 aa23.12■■□□□ 1.29
LINC00476-201ENST00000321517 PUS7Q96PZ0 661 aaKnown RBP23.11■■□□□ 1.29
LINC00476-201ENST00000321517 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
LINC00476-201ENST00000321517 ERBB3P21860 1342 aa23.1■■□□□ 1.29
LINC00476-201ENST00000321517 EDC4Q6P2E9 1401 aaKnown RBP23.1■■□□□ 1.29
LINC00476-201ENST00000321517 KCNQ2O43526 872 aa23.1■■□□□ 1.29
LINC00476-201ENST00000321517 NLRP2Q9NX02 1062 aa23.1■■□□□ 1.29
LINC00476-201ENST00000321517 ABCC6O95255 1503 aa23.09■■□□□ 1.29
LINC00476-201ENST00000321517 PDGFDQ9GZP0 370 aaPredicted RBP23.09■■□□□ 1.29
LINC00476-201ENST00000321517 TERF2IPQ9NYB0 399 aa23.09■■□□□ 1.29
LINC00476-201ENST00000321517 LTN1O94822 1766 aa23.09■■□□□ 1.29
LINC00476-201ENST00000321517 FBLN1P23142 703 aa23.08■■□□□ 1.29
LINC00476-201ENST00000321517 ANKRD24Q8TF21 1146 aa23.08■■□□□ 1.29
LINC00476-201ENST00000321517 RGPD3A6NKT7 1758 aaPredicted RBP23.07■■□□□ 1.28
LINC00476-201ENST00000321517 RGPD4Q7Z3J3 1758 aa23.07■■□□□ 1.28
LINC00476-201ENST00000321517 TNS2Q63HR2 1409 aa23.05■■□□□ 1.28
LINC00476-201ENST00000321517 TXNRD1Q16881 649 aa23.04■■□□□ 1.28
LINC00476-201ENST00000321517 ACSBG1Q96GR2 724 aa23.04■■□□□ 1.28
LINC00476-201ENST00000321517 IL2RBP14784 551 aa23.03■■□□□ 1.28
LINC00476-201ENST00000321517 IP6K1Q92551 441 aa23.03■■□□□ 1.28
LINC00476-201ENST00000321517 SPON1Q9HCB6 807 aa23.03■■□□□ 1.28
LINC00476-201ENST00000321517 HSPA5P11021 654 aaKnown RBP23.01■■□□□ 1.27
LINC00476-201ENST00000321517 CDCA8Q53HL2 280 aa23.01■■□□□ 1.27
LINC00476-201ENST00000321517 LTV1Q96GA3 475 aaPredicted RBP23.01■■□□□ 1.27
LINC00476-201ENST00000321517 CASZ1Q86V15 1759 aa22.99■■□□□ 1.27
LINC00476-201ENST00000321517 TMF1P82094 1093 aa22.99■■□□□ 1.27
LINC00476-201ENST00000321517 KAT6BQ8WYB5 2073 aa22.98■■□□□ 1.27
LINC00476-201ENST00000321517 MAP3K19Q56UN5 1328 aa22.98■■□□□ 1.27
LINC00476-201ENST00000321517 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
LINC00476-201ENST00000321517 NHSQ6T4R5 1651 aa22.97■■□□□ 1.27
LINC00476-201ENST00000321517 ZBTB7AO95365 584 aa22.96■■□□□ 1.27
LINC00476-201ENST00000321517 COG3Q96JB2 828 aa22.96■■□□□ 1.27
LINC00476-201ENST00000321517 HOXC9P31274 260 aa22.95■■□□□ 1.26
LINC00476-201ENST00000321517 SLC15A2Q16348 729 aa22.95■■□□□ 1.26
LINC00476-201ENST00000321517 PPP1R1BQ9UD71 204 aaPredicted RBP22.95■■□□□ 1.26
LINC00476-201ENST00000321517 FYB1O15117 783 aa22.94■■□□□ 1.26
LINC00476-201ENST00000321517 ATF5Q9Y2D1 282 aaPredicted RBP22.94■■□□□ 1.26
LINC00476-201ENST00000321517 ANKRD36BQ8N2N9 1353 aa22.93■■□□□ 1.26
LINC00476-201ENST00000321517 PTGER2P43116 358 aa22.93■■□□□ 1.26
LINC00476-201ENST00000321517 DDX54Q8TDD1 881 aaKnown RBP22.93■■□□□ 1.26
LINC00476-201ENST00000321517 GGNBP2Q9H3C7 697 aa22.93■■□□□ 1.26
LINC00476-201ENST00000321517 STK32BQ9NY57 414 aa22.93■■□□□ 1.26
LINC00476-201ENST00000321517 RGPD2P0DJD1 1756 aa22.93■■□□□ 1.26
LINC00476-201ENST00000321517 RRS1Q15050 365 aaKnown RBP22.92■■□□□ 1.26
LINC00476-201ENST00000321517 BTAF1O14981 1849 aa22.92■■□□□ 1.26
LINC00476-201ENST00000321517 AMPHP49418 695 aa22.91■■□□□ 1.26
LINC00476-201ENST00000321517 LRRC4BQ9NT99 713 aa22.91■■□□□ 1.26
LINC00476-201ENST00000321517 FAM208AQ9UK61 1670 aaKnown RBP22.89■■□□□ 1.25
LINC00476-201ENST00000321517 ZNF827Q17R98 1081 aa22.88■■□□□ 1.25
LINC00476-201ENST00000321517 NBPF6Q5VWK0 638 aa22.88■■□□□ 1.25
LINC00476-201ENST00000321517 NBPF4Q96M43 638 aa22.88■■□□□ 1.25
LINC00476-201ENST00000321517 PAPPAQ13219 1627 aa22.86■■□□□ 1.25
LINC00476-201ENST00000321517 SGIP1Q9BQI5 828 aa22.86■■□□□ 1.25
LINC00476-201ENST00000321517 CARD14Q9BXL6 1004 aa22.86■■□□□ 1.25
LINC00476-201ENST00000321517 USHBP1Q8N6Y0 703 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms