RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 GCC1Q96CN9 775 aa20.3■□□□□ 0.84
PDE1C-201ENST00000321453 UGGT1Q9NYU2 1555 aa20.29■□□□□ 0.84
PDE1C-201ENST00000321453 SAFB2Q14151 953 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDE1C-201ENST00000321453 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
PDE1C-201ENST00000321453 PLCB2Q00722 1185 aa20.28■□□□□ 0.84
PDE1C-201ENST00000321453 USP26Q9BXU7 913 aa20.28■□□□□ 0.84
PDE1C-201ENST00000321453 GGNBP2Q9H3C7 697 aa20.28■□□□□ 0.84
PDE1C-201ENST00000321453 USP25Q9UHP3 1055 aa20.28■□□□□ 0.84
PDE1C-201ENST00000321453 UTP14CQ5TAP6 766 aaKnown RBP20.27■□□□□ 0.84
PDE1C-201ENST00000321453 TSPY26PQ9H489 355 aa20.27■□□□□ 0.84
PDE1C-201ENST00000321453 PLEKHF1Q96S99 279 aa20.27■□□□□ 0.83
PDE1C-201ENST00000321453 PLEKHM2Q8IWE5 1019 aa20.26■□□□□ 0.83
PDE1C-201ENST00000321453 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
PDE1C-201ENST00000321453 ST18O60284 1047 aa20.25■□□□□ 0.83
PDE1C-201ENST00000321453 NOLC1Q14978 699 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDE1C-201ENST00000321453 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
PDE1C-201ENST00000321453 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
PDE1C-201ENST00000321453 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
PDE1C-201ENST00000321453 BBXQ8WY36 941 aaPredicted RBP20.24■□□□□ 0.83
PDE1C-201ENST00000321453 TRPM2O94759 1503 aa20.24■□□□□ 0.83
PDE1C-201ENST00000321453 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
PDE1C-201ENST00000321453 GADD45BO75293 160 aaPredicted RBP20.23■□□□□ 0.83
PDE1C-201ENST00000321453 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
PDE1C-201ENST00000321453 BCL2L12Q9HB09 334 aa20.23■□□□□ 0.83
PDE1C-201ENST00000321453 CWC22Q9HCG8 908 aaKnown RBP20.23■□□□□ 0.83
PDE1C-201ENST00000321453 ARHGAP31Q2M1Z3 1444 aa20.22■□□□□ 0.83
PDE1C-201ENST00000321453 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
PDE1C-201ENST00000321453 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
PDE1C-201ENST00000321453 U2AF2P26368 475 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDE1C-201ENST00000321453 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
PDE1C-201ENST00000321453 KIF3AQ9Y496 699 aa20.21■□□□□ 0.83
PDE1C-201ENST00000321453 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
PDE1C-201ENST00000321453 ADGRB2O60241 1585 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 SDSP20132 328 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 NEK4P51957 841 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
PDE1C-201ENST00000321453 PIBF1Q8WXW3 757 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 MBD3O95983 291 aa20.19■□□□□ 0.82
PDE1C-201ENST00000321453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDE1C-201ENST00000321453 TRAPPC8Q9Y2L5 1435 aa20.19■□□□□ 0.82
PDE1C-201ENST00000321453 ADCY5O95622 1261 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 FBLN1P23142 703 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 PDCL2Q8N4E4 241 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 KIF3BO15066 747 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 PRIMPOLQ96LW4 560 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 ALDH1L2Q3SY69 923 aa20.17■□□□□ 0.82
PDE1C-201ENST00000321453 STAC3Q96MF2 364 aa20.17■□□□□ 0.82
PDE1C-201ENST00000321453 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
PDE1C-201ENST00000321453 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
PDE1C-201ENST00000321453 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
PDE1C-201ENST00000321453 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
PDE1C-201ENST00000321453 ZBTB22O15209 634 aa20.16■□□□□ 0.82
PDE1C-201ENST00000321453 HMGN5P82970 282 aaKnown RBP20.16■□□□□ 0.82
PDE1C-201ENST00000321453 GTPBP4Q9BZE4 634 aaKnown RBP20.16■□□□□ 0.82
PDE1C-201ENST00000321453 MAP3K4Q9Y6R4 1608 aa20.16■□□□□ 0.82
PDE1C-201ENST00000321453 DTNBO60941 627 aa20.14■□□□□ 0.82
PDE1C-201ENST00000321453 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.82
PDE1C-201ENST00000321453 VAMP4O75379 141 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 HMOX1P09601 288 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 TSHZ3Q63HK5 1081 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 SPC24Q8NBT2 197 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 CGNQ9P2M7 1197 aaKnown RBP20.14■□□□□ 0.81
PDE1C-201ENST00000321453 MED14O60244 1454 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 RIOK3O14730 519 aaKnown RBP20.13■□□□□ 0.81
PDE1C-201ENST00000321453 IL16Q14005 1332 aa20.13■□□□□ 0.81
PDE1C-201ENST00000321453 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
PDE1C-201ENST00000321453 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
PDE1C-201ENST00000321453 ZNF771Q7L3S4 317 aaPredicted RBP20.12■□□□□ 0.81
PDE1C-201ENST00000321453 USP48Q86UV5 1035 aa20.12■□□□□ 0.81
PDE1C-201ENST00000321453 ADGRL1O94910 1474 aa20.12■□□□□ 0.81
PDE1C-201ENST00000321453 VGLL3A8MV65 326 aa20.12■□□□□ 0.81
PDE1C-201ENST00000321453 SYAP1Q96A49 352 aaPredicted RBP20.12■□□□□ 0.81
PDE1C-201ENST00000321453 PYCARDQ9ULZ3 195 aa20.12■□□□□ 0.81
PDE1C-201ENST00000321453 LETM1O95202 739 aaPredicted RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 PPRC1Q5VV67 1664 aaKnown RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 DIAPH1O60610 1272 aaKnown RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 KIF20AO95235 890 aa20.11■□□□□ 0.81
PDE1C-201ENST00000321453 BRD1O95696 1058 aa20.11■□□□□ 0.81
PDE1C-201ENST00000321453 MAPK8IP2Q13387 824 aaPredicted RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 FKBP5Q13451 457 aaPredicted RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
PDE1C-201ENST00000321453 GTF2F1P35269 517 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDE1C-201ENST00000321453 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
PDE1C-201ENST00000321453 EFCAB2Q5VUJ9 269 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 PALD1Q9ULE6 856 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 SBNO2Q9Y2G9 1366 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 QRICH2Q9H0J4 1663 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 DCTPP1Q9H773 170 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 REC8O95072 547 aa20.08■□□□□ 0.81
PDE1C-201ENST00000321453 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.81
PDE1C-201ENST00000321453 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.8
PDE1C-201ENST00000321453 PDE4CQ08493 712 aa20.08■□□□□ 0.8
PDE1C-201ENST00000321453 KRT24Q2M2I5 525 aa20.08■□□□□ 0.8
PDE1C-201ENST00000321453 CHMP4BQ9H444 224 aaKnown RBP20.08■□□□□ 0.8
PDE1C-201ENST00000321453 ABCC4O15439 1325 aa20.07■□□□□ 0.8
PDE1C-201ENST00000321453 ERC2O15083 957 aa20.07■□□□□ 0.8
PDE1C-201ENST00000321453 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
PDE1C-201ENST00000321453 C8orf58Q8NAV2 365 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms