RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 ARHGAP5Q13017 1502 aa9.71□□□□□ -0.86
RTL3-201ENST00000321110 CTIFO43310 598 aaKnown RBP9.7□□□□□ -0.86
RTL3-201ENST00000321110 CDC45O75419 566 aa9.7□□□□□ -0.86
RTL3-201ENST00000321110 SLFN14P0C7P3 912 aa9.7□□□□□ -0.86
RTL3-201ENST00000321110 CDK11BP21127 795 aaKnown RBP9.7□□□□□ -0.86
RTL3-201ENST00000321110 KCNJ4P48050 445 aa9.7□□□□□ -0.86
RTL3-201ENST00000321110 MAPK8IP2Q13387 824 aaPredicted RBP9.7□□□□□ -0.86
RTL3-201ENST00000321110 OGFRQ9NZT2 677 aa9.7□□□□□ -0.86
RTL3-201ENST00000321110 MADDQ8WXG6 1647 aa9.7□□□□□ -0.86
RTL3-201ENST00000321110 NOS1P29475 1434 aa9.7□□□□□ -0.86
RTL3-201ENST00000321110 CT47B1P0C2W7 299 aaPredicted RBP9.69□□□□□ -0.86
RTL3-201ENST00000321110 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
RTL3-201ENST00000321110 GABPB1Q06547 395 aaPredicted RBP9.69□□□□□ -0.86
RTL3-201ENST00000321110 PPIP5K1Q6PFW1 1433 aa9.69□□□□□ -0.86
RTL3-201ENST00000321110 ADCY5O95622 1261 aa9.69□□□□□ -0.86
RTL3-201ENST00000321110 CEP152O94986 1710 aa9.69□□□□□ -0.86
RTL3-201ENST00000321110 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.69□□□□□ -0.86
RTL3-201ENST00000321110 NCBP1Q09161 790 aaKnown RBP9.69□□□□□ -0.86
RTL3-201ENST00000321110 USP26Q9BXU7 913 aa9.69□□□□□ -0.86
RTL3-201ENST00000321110 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
RTL3-201ENST00000321110 DIAPH3Q9NSV4 1193 aa9.68□□□□□ -0.86
RTL3-201ENST00000321110 CTNNA3Q9UI47 895 aa9.68□□□□□ -0.86
RTL3-201ENST00000321110 PYCARDQ9ULZ3 195 aa9.68□□□□□ -0.86
RTL3-201ENST00000321110 KDM5AP29375 1690 aaKnown RBP9.68□□□□□ -0.86
RTL3-201ENST00000321110 ATP10AO60312 1499 aa9.68□□□□□ -0.86
RTL3-201ENST00000321110 ERVK-7P63135 1459 aa9.68□□□□□ -0.86
RTL3-201ENST00000321110 KIAA1524Q8TCG1 905 aa9.68□□□□□ -0.86
RTL3-201ENST00000321110 DUOX2Q9NRD8 1548 aa9.67□□□□□ -0.86
RTL3-201ENST00000321110 UVSSAQ2YD98 709 aa9.67□□□□□ -0.86
RTL3-201ENST00000321110 MORC1Q86VD1 984 aa9.67□□□□□ -0.86
RTL3-201ENST00000321110 KCNF1Q9H3M0 494 aa9.67□□□□□ -0.86
RTL3-201ENST00000321110 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
RTL3-201ENST00000321110 GCC1Q96CN9 775 aa9.67□□□□□ -0.86
RTL3-201ENST00000321110 GADD45BO75293 160 aaPredicted RBP9.66□□□□□ -0.86
RTL3-201ENST00000321110 SLC20A2Q08357 652 aa9.66□□□□□ -0.86
RTL3-201ENST00000321110 SIRT2Q8IXJ6 389 aa9.66□□□□□ -0.86
RTL3-201ENST00000321110 FAM184AQ8NB25 1140 aa9.66□□□□□ -0.86
RTL3-201ENST00000321110 DDX41Q9UJV9 622 aaKnown RBP9.66□□□□□ -0.86
RTL3-201ENST00000321110 ZNF518AQ6AHZ1 1483 aa9.66□□□□□ -0.86
RTL3-201ENST00000321110 BRD1O95696 1058 aa9.66□□□□□ -0.86
RTL3-201ENST00000321110 CAPN2P17655 700 aa9.66□□□□□ -0.86
RTL3-201ENST00000321110 MTHFSP49914 203 aa9.66□□□□□ -0.86
RTL3-201ENST00000321110 CHAF1AQ13111 956 aaPredicted RBP9.66□□□□□ -0.86
RTL3-201ENST00000321110 TERF2Q15554 542 aa9.66□□□□□ -0.86
RTL3-201ENST00000321110 ST18O60284 1047 aa9.65□□□□□ -0.86
RTL3-201ENST00000321110 VGFO15240 615 aaPredicted RBP9.65□□□□□ -0.87
RTL3-201ENST00000321110 SMARCA5O60264 1052 aaPredicted RBP9.65□□□□□ -0.87
RTL3-201ENST00000321110 HCLS1P14317 486 aaPredicted RBP9.65□□□□□ -0.87
RTL3-201ENST00000321110 NAA30Q147X3 362 aaPredicted RBP9.65□□□□□ -0.87
RTL3-201ENST00000321110 NCBP3Q53F19 620 aaKnown RBP9.65□□□□□ -0.87
RTL3-201ENST00000321110 SYAP1Q96A49 352 aaPredicted RBP9.65□□□□□ -0.87
RTL3-201ENST00000321110 GDPD2Q9HCC8 539 aa9.65□□□□□ -0.87
RTL3-201ENST00000321110 NSD3Q9BZ95 1437 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 ANKRD36BQ8N2N9 1353 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 CLTCL1P53675 1640 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 ZBTB7BO15156 539 aaPredicted RBP9.64□□□□□ -0.87
RTL3-201ENST00000321110 AP5Z1O43299 807 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 MORC2Q9Y6X9 1032 aaPredicted RBP9.64□□□□□ -0.87
RTL3-201ENST00000321110 MED14O60244 1454 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 ADGRB2O60241 1585 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
RTL3-201ENST00000321110 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
RTL3-201ENST00000321110 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.87
RTL3-201ENST00000321110 PLEKHM2Q8IWE5 1019 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 TIGD1Q96MW7 591 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 DNAJC2Q99543 621 aaKnown RBP9.64□□□□□ -0.87
RTL3-201ENST00000321110 TRIM35Q9UPQ4 493 aa9.64□□□□□ -0.87
RTL3-201ENST00000321110 CD109Q6YHK3 1445 aa9.63□□□□□ -0.87
RTL3-201ENST00000321110 CCDC66A2RUB6 948 aa9.63□□□□□ -0.87
RTL3-201ENST00000321110 TULP2O00295 520 aa9.63□□□□□ -0.87
RTL3-201ENST00000321110 KDM4AO75164 1064 aa9.63□□□□□ -0.87
RTL3-201ENST00000321110 PHF14O94880 888 aa9.63□□□□□ -0.87
RTL3-201ENST00000321110 FOXD4L6Q3SYB3 417 aaPredicted RBP9.63□□□□□ -0.87
RTL3-201ENST00000321110 FOXD4L3Q6VB84 417 aaPredicted RBP9.63□□□□□ -0.87
RTL3-201ENST00000321110 CHMP4AQ9BY43 222 aa9.63□□□□□ -0.87
RTL3-201ENST00000321110 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
RTL3-201ENST00000321110 SYCP1Q15431 976 aa9.62□□□□□ -0.87
RTL3-201ENST00000321110 TTC22Q5TAA0 569 aa9.62□□□□□ -0.87
RTL3-201ENST00000321110 CYB5RLQ6IPT4 315 aa9.62□□□□□ -0.87
RTL3-201ENST00000321110 KIF18AQ8NI77 898 aa9.62□□□□□ -0.87
RTL3-201ENST00000321110 TMX3Q96JJ7 454 aa9.62□□□□□ -0.87
RTL3-201ENST00000321110 SPHKAPQ2M3C7 1700 aa9.62□□□□□ -0.87
RTL3-201ENST00000321110 USP48Q86UV5 1035 aa9.62□□□□□ -0.87
RTL3-201ENST00000321110 ADGRL1O94910 1474 aa9.61□□□□□ -0.87
RTL3-201ENST00000321110 INTS3Q68E01 1043 aaKnown RBP9.61□□□□□ -0.87
RTL3-201ENST00000321110 ERICH4A6NGS2 130 aa9.61□□□□□ -0.87
RTL3-201ENST00000321110 TMPOP42166 694 aaKnown RBP9.61□□□□□ -0.87
RTL3-201ENST00000321110 PLCB2Q00722 1185 aa9.61□□□□□ -0.87
RTL3-201ENST00000321110 C16orf71Q8IYS4 520 aaPredicted RBP9.61□□□□□ -0.87
RTL3-201ENST00000321110 SPC24Q8NBT2 197 aa9.61□□□□□ -0.87
RTL3-201ENST00000321110 CFAP53Q96M91 514 aa9.61□□□□□ -0.87
RTL3-201ENST00000321110 RIMBP3CA6NJZ7 1639 aa9.6□□□□□ -0.87
RTL3-201ENST00000321110 RIMBP3BA6NNM3 1639 aa9.6□□□□□ -0.87
RTL3-201ENST00000321110 RIMBP3Q9UFD9 1639 aa9.6□□□□□ -0.87
RTL3-201ENST00000321110 CERS3Q8IU89 383 aa9.6□□□□□ -0.87
RTL3-201ENST00000321110 PPRC1Q5VV67 1664 aaKnown RBP9.6□□□□□ -0.87
RTL3-201ENST00000321110 ABCC1P33527 1531 aa9.6□□□□□ -0.87
RTL3-201ENST00000321110 CCDC183Q5T5S1 534 aa9.6□□□□□ -0.87
RTL3-201ENST00000321110 KRT222Q8N1A0 295 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms