RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SRCIN1Q9C0H9 1055 aa19.92■□□□□ 0.78
CLIP4-201ENST00000320081 RBM10P98175 930 aaKnown RBP19.91■□□□□ 0.78
CLIP4-201ENST00000320081 PROSER2Q86WR7 435 aaPredicted RBP19.91■□□□□ 0.78
CLIP4-201ENST00000320081 GDPD2Q9HCC8 539 aa19.91■□□□□ 0.78
CLIP4-201ENST00000320081 FOXO3O43524 673 aa19.9■□□□□ 0.78
CLIP4-201ENST00000320081 AEBP1Q8IUX7 1158 aa19.9■□□□□ 0.78
CLIP4-201ENST00000320081 SPC24Q8NBT2 197 aa19.9■□□□□ 0.78
CLIP4-201ENST00000320081 RAD21O60216 631 aa19.9■□□□□ 0.78
CLIP4-201ENST00000320081 ATF3P18847 181 aa19.9■□□□□ 0.78
CLIP4-201ENST00000320081 HSP90AB2PQ58FF8 381 aa19.9■□□□□ 0.78
CLIP4-201ENST00000320081 CNTROBQ8N137 903 aa19.9■□□□□ 0.78
CLIP4-201ENST00000320081 DHX29Q7Z478 1369 aaKnown RBP19.9■□□□□ 0.78
CLIP4-201ENST00000320081 SSFA2P28290 1259 aa19.89■□□□□ 0.78
CLIP4-201ENST00000320081 RNF20Q5VTR2 975 aa19.89■□□□□ 0.78
CLIP4-201ENST00000320081 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
CLIP4-201ENST00000320081 CUL7Q14999 1698 aa19.88■□□□□ 0.77
CLIP4-201ENST00000320081 ATAD2Q6PL18 1390 aa19.88■□□□□ 0.77
CLIP4-201ENST00000320081 GRPEL1Q9HAV7 217 aa19.88■□□□□ 0.77
CLIP4-201ENST00000320081 UGGT2Q9NYU1 1516 aa19.88■□□□□ 0.77
CLIP4-201ENST00000320081 ADGRL1O94910 1474 aa19.88■□□□□ 0.77
CLIP4-201ENST00000320081 TSPYL6Q8N831 410 aa19.88■□□□□ 0.77
CLIP4-201ENST00000320081 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
CLIP4-201ENST00000320081 CD109Q6YHK3 1445 aa19.88■□□□□ 0.77
CLIP4-201ENST00000320081 C14orf93Q9H972 538 aaKnown RBP19.88■□□□□ 0.77
CLIP4-201ENST00000320081 MPRIPQ6WCQ1 1025 aa19.87■□□□□ 0.77
CLIP4-201ENST00000320081 MBIPQ9NS73 344 aa19.87■□□□□ 0.77
CLIP4-201ENST00000320081 KIF3AQ9Y496 699 aa19.87■□□□□ 0.77
CLIP4-201ENST00000320081 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
CLIP4-201ENST00000320081 PTCD1O75127 700 aaKnown RBP19.86■□□□□ 0.77
CLIP4-201ENST00000320081 HSP90AB4PQ58FF6 505 aa19.86■□□□□ 0.77
CLIP4-201ENST00000320081 DTNBO60941 627 aa19.86■□□□□ 0.77
CLIP4-201ENST00000320081 C8orf34Q49A92 452 aa19.86■□□□□ 0.77
CLIP4-201ENST00000320081 NFXL1Q6ZNB6 911 aa19.86■□□□□ 0.77
CLIP4-201ENST00000320081 AACSQ86V21 672 aa19.86■□□□□ 0.77
CLIP4-201ENST00000320081 LAMC3Q9Y6N6 1575 aa19.86■□□□□ 0.77
CLIP4-201ENST00000320081 NCBP3Q53F19 620 aaKnown RBP19.85■□□□□ 0.77
CLIP4-201ENST00000320081 PLEKHO1Q53GL0 409 aaPredicted RBP19.84■□□□□ 0.77
CLIP4-201ENST00000320081 PHACTR3Q96KR7 559 aa19.84■□□□□ 0.77
CLIP4-201ENST00000320081 IFT57Q9NWB7 429 aa19.84■□□□□ 0.77
CLIP4-201ENST00000320081 TAF7Q15545 349 aaPredicted RBP19.84■□□□□ 0.77
CLIP4-201ENST00000320081 CCT4P50991 539 aaKnown RBP19.84■□□□□ 0.77
CLIP4-201ENST00000320081 TBC1D9Q6ZT07 1266 aa19.84■□□□□ 0.77
CLIP4-201ENST00000320081 SDF4Q9BRK5 362 aa19.84■□□□□ 0.77
CLIP4-201ENST00000320081 LRRFIP2Q9Y608 721 aaKnown RBP19.83■□□□□ 0.77
CLIP4-201ENST00000320081 SCAF11Q99590 1463 aaKnown RBP19.83■□□□□ 0.77
CLIP4-201ENST00000320081 C8orf58Q8NAV2 365 aa19.83■□□□□ 0.77
CLIP4-201ENST00000320081 PARD3Q8TEW0 1356 aa19.83■□□□□ 0.76
CLIP4-201ENST00000320081 RPGRIP1LQ68CZ1 1315 aa19.83■□□□□ 0.76
CLIP4-201ENST00000320081 SYCE3A1L190 88 aa19.83■□□□□ 0.76
CLIP4-201ENST00000320081 BTBD11A6QL63 1104 aa19.83■□□□□ 0.76
CLIP4-201ENST00000320081 MEIS3Q99687 375 aa19.83■□□□□ 0.76
CLIP4-201ENST00000320081 CT47B1P0C2W7 299 aaPredicted RBP19.82■□□□□ 0.76
CLIP4-201ENST00000320081 TRDNQ13061 729 aa19.82■□□□□ 0.76
CLIP4-201ENST00000320081 TRAPPC8Q9Y2L5 1435 aa19.82■□□□□ 0.76
CLIP4-201ENST00000320081 TPM4P67936 248 aa19.82■□□□□ 0.76
CLIP4-201ENST00000320081 JAKMIP1Q96N16 626 aaKnown RBP19.82■□□□□ 0.76
CLIP4-201ENST00000320081 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
CLIP4-201ENST00000320081 WASLO00401 505 aaPredicted RBP19.82■□□□□ 0.76
CLIP4-201ENST00000320081 DDX11Q96FC9 970 aa19.82■□□□□ 0.76
CLIP4-201ENST00000320081 RRP12Q5JTH9 1297 aaKnown RBP19.81■□□□□ 0.76
CLIP4-201ENST00000320081 TNPO1Q92973 898 aaKnown RBP19.81■□□□□ 0.76
CLIP4-201ENST00000320081 SASS6Q6UVJ0 657 aa19.81■□□□□ 0.76
CLIP4-201ENST00000320081 RALYLQ86SE5 291 aaKnown RBP19.81■□□□□ 0.76
CLIP4-201ENST00000320081 BOLA2Q9H3K6 86 aa19.81■□□□□ 0.76
CLIP4-201ENST00000320081 SPG7Q9UQ90 795 aa19.81■□□□□ 0.76
CLIP4-201ENST00000320081 KIF14Q15058 1648 aa19.81■□□□□ 0.76
CLIP4-201ENST00000320081 VPS37DQ86XT2 251 aa19.8■□□□□ 0.76
CLIP4-201ENST00000320081 PANK2Q9BZ23 570 aa19.8■□□□□ 0.76
CLIP4-201ENST00000320081 CCDC8Q9H0W5 538 aaPredicted RBP19.8■□□□□ 0.76
CLIP4-201ENST00000320081 KAT6BQ8WYB5 2073 aa19.8■□□□□ 0.76
CLIP4-201ENST00000320081 AKAP17AQ02040 695 aaKnown RBP19.8■□□□□ 0.76
CLIP4-201ENST00000320081 AMOTL2Q9Y2J4 779 aa19.8■□□□□ 0.76
CLIP4-201ENST00000320081 FKBP4Q02790 459 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLIP4-201ENST00000320081 RPAP2Q8IXW5 612 aaPredicted RBP19.8■□□□□ 0.76
CLIP4-201ENST00000320081 VPS53Q5VIR6 699 aa19.79■□□□□ 0.76
CLIP4-201ENST00000320081 THEMISQ8N1K5 641 aaPredicted RBP19.79■□□□□ 0.76
CLIP4-201ENST00000320081 TRIM5Q9C035 493 aa19.79■□□□□ 0.76
CLIP4-201ENST00000320081 CPLX2Q6PUV4 134 aaKnown RBP19.79■□□□□ 0.76
CLIP4-201ENST00000320081 GNAT3A8MTJ3 354 aa19.78■□□□□ 0.76
CLIP4-201ENST00000320081 PIP4K2AP48426 406 aaPredicted RBP19.78■□□□□ 0.76
CLIP4-201ENST00000320081 SAMD1Q6SPF0 538 aaPredicted RBP19.78■□□□□ 0.76
CLIP4-201ENST00000320081 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.78■□□□□ 0.76
CLIP4-201ENST00000320081 FANCAO15360 1455 aa19.78■□□□□ 0.76
CLIP4-201ENST00000320081 MX1P20591 662 aa19.78■□□□□ 0.76
CLIP4-201ENST00000320081 SYNE3Q6ZMZ3 975 aa19.78■□□□□ 0.76
CLIP4-201ENST00000320081 CCDC73Q6ZRK6 1079 aa19.78■□□□□ 0.76
CLIP4-201ENST00000320081 TBC1D32Q96NH3 1257 aa19.78■□□□□ 0.76
CLIP4-201ENST00000320081 TPD52L1Q16890 204 aaPredicted RBP19.77■□□□□ 0.76
CLIP4-201ENST00000320081 TOM1L2Q6ZVM7 507 aa19.77■□□□□ 0.76
CLIP4-201ENST00000320081 HOMER1Q86YM7 354 aa19.77■□□□□ 0.76
CLIP4-201ENST00000320081 TCEANC2Q96MN5 208 aa19.77■□□□□ 0.76
CLIP4-201ENST00000320081 ESPNB1AK53 854 aa19.77■□□□□ 0.76
CLIP4-201ENST00000320081 CCDC83Q8IWF9 413 aa19.77■□□□□ 0.76
CLIP4-201ENST00000320081 CASTP20810 708 aaKnown RBP19.76■□□□□ 0.75
CLIP4-201ENST00000320081 LARP1BQ659C4 914 aaKnown RBP19.76■□□□□ 0.75
CLIP4-201ENST00000320081 SYCP2Q9BX26 1530 aa19.76■□□□□ 0.75
CLIP4-201ENST00000320081 G3V3G9 751 aa19.76■□□□□ 0.75
CLIP4-201ENST00000320081 DCAF8Q5TAQ9 597 aa19.76■□□□□ 0.75
CLIP4-201ENST00000320081 PRPF40BQ6NWY9 871 aaKnown RBP19.76■□□□□ 0.75
CLIP4-201ENST00000320081 CYP46A1Q9Y6A2 500 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms