RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 DHX8Q14562 1220 aaKnown RBP16.71■□□□□ 0.26
RAPH1-202ENST00000319170 GPRASP1Q5JY77 1395 aa16.7■□□□□ 0.26
RAPH1-202ENST00000319170 EZRP15311 586 aaKnown RBP16.7■□□□□ 0.26
RAPH1-202ENST00000319170 MPNDQ8N594 471 aa16.7■□□□□ 0.26
RAPH1-202ENST00000319170 GAS2L2Q8NHY3 880 aa16.7■□□□□ 0.26
RAPH1-202ENST00000319170 PPP1R1BQ9UD71 204 aaPredicted RBP16.7■□□□□ 0.26
RAPH1-202ENST00000319170 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
RAPH1-202ENST00000319170 ERLIN1O75477 346 aa16.7■□□□□ 0.26
RAPH1-202ENST00000319170 RBM5P52756 815 aaKnown RBP eCLIP16.7■□□□□ 0.26
RAPH1-202ENST00000319170 ADAMTS8Q9UP79 889 aa16.7■□□□□ 0.26
RAPH1-202ENST00000319170 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
RAPH1-202ENST00000319170 CCDC112Q8NEF3 446 aa16.69■□□□□ 0.26
RAPH1-202ENST00000319170 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
RAPH1-202ENST00000319170 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
RAPH1-202ENST00000319170 KIAA1328Q86T90 577 aa16.68■□□□□ 0.26
RAPH1-202ENST00000319170 MTHFSP49914 203 aa16.68■□□□□ 0.26
RAPH1-202ENST00000319170 NACAP1Q9BZK3 213 aa16.68■□□□□ 0.26
RAPH1-202ENST00000319170 NLRP6P59044 892 aa16.68■□□□□ 0.26
RAPH1-202ENST00000319170 GCC1Q96CN9 775 aa16.67■□□□□ 0.26
RAPH1-202ENST00000319170 INCENPQ9NQS7 918 aa16.67■□□□□ 0.26
RAPH1-202ENST00000319170 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
RAPH1-202ENST00000319170 PLEKHO1Q53GL0 409 aaPredicted RBP16.67■□□□□ 0.26
RAPH1-202ENST00000319170 STRN4Q9NRL3 753 aa16.67■□□□□ 0.26
RAPH1-202ENST00000319170 ERICH4A6NGS2 130 aa16.66■□□□□ 0.26
RAPH1-202ENST00000319170 NEBLO76041 1014 aa16.66■□□□□ 0.26
RAPH1-202ENST00000319170 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
RAPH1-202ENST00000319170 FGD6Q6ZV73 1430 aa16.66■□□□□ 0.26
RAPH1-202ENST00000319170 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
RAPH1-202ENST00000319170 K7ELQ4 463 aaPredicted RBP16.66■□□□□ 0.26
RAPH1-202ENST00000319170 SSR1P43307 286 aaKnown RBP16.66■□□□□ 0.26
RAPH1-202ENST00000319170 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
RAPH1-202ENST00000319170 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
RAPH1-202ENST00000319170 MYL6BP14649 208 aa16.66■□□□□ 0.26
RAPH1-202ENST00000319170 KRT85P78386 507 aa16.66■□□□□ 0.26
RAPH1-202ENST00000319170 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 DESP17661 470 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 TMEM132EQ6IEE7 984 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 SCAPERQ9BY12 1400 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 CEP57L1Q8IYX8 460 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 SPINK5Q9NQ38 1064 aaPredicted RBP16.65■□□□□ 0.26
RAPH1-202ENST00000319170 FKBP4Q02790 459 aaKnown RBP eCLIP16.65■□□□□ 0.26
RAPH1-202ENST00000319170 SPATA32Q96LK8 384 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 LARP1BQ659C4 914 aaKnown RBP16.65■□□□□ 0.26
RAPH1-202ENST00000319170 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
RAPH1-202ENST00000319170 CDKL5O76039 1030 aa16.65■□□□□ 0.26
RAPH1-202ENST00000319170 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
RAPH1-202ENST00000319170 CCDC102AQ96A19 550 aa16.64■□□□□ 0.25
RAPH1-202ENST00000319170 SSBP05455 408 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAPH1-202ENST00000319170 CCT4P50991 539 aaKnown RBP16.64■□□□□ 0.25
RAPH1-202ENST00000319170 MPHOSPH10O00566 681 aaKnown RBP16.64■□□□□ 0.25
RAPH1-202ENST00000319170 JAKMIP3Q5VZ66 844 aa16.64■□□□□ 0.25
RAPH1-202ENST00000319170 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
RAPH1-202ENST00000319170 CABP4P57796 275 aa16.64■□□□□ 0.25
RAPH1-202ENST00000319170 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
RAPH1-202ENST00000319170 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
RAPH1-202ENST00000319170 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
RAPH1-202ENST00000319170 AACSQ86V21 672 aa16.63■□□□□ 0.25
RAPH1-202ENST00000319170 TSR2Q969E8 191 aaKnown RBP16.63■□□□□ 0.25
RAPH1-202ENST00000319170 CCDC97Q96F63 343 aaPredicted RBP16.63■□□□□ 0.25
RAPH1-202ENST00000319170 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
RAPH1-202ENST00000319170 CCDC57Q2TAC2 916 aa16.63■□□□□ 0.25
RAPH1-202ENST00000319170 ZNF76P36508 570 aa16.63■□□□□ 0.25
RAPH1-202ENST00000319170 EXOSC9Q06265 439 aaKnown RBP16.63■□□□□ 0.25
RAPH1-202ENST00000319170 TAF3Q5VWG9 929 aa16.63■□□□□ 0.25
RAPH1-202ENST00000319170 TDO2P48775 406 aa16.62■□□□□ 0.25
RAPH1-202ENST00000319170 CYB5RLQ6IPT4 315 aa16.62■□□□□ 0.25
RAPH1-202ENST00000319170 PDRG1Q9NUG6 133 aa16.62■□□□□ 0.25
RAPH1-202ENST00000319170 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
RAPH1-202ENST00000319170 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
RAPH1-202ENST00000319170 ZNF397Q8NF99 534 aaPredicted RBP16.62■□□□□ 0.25
RAPH1-202ENST00000319170 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
RAPH1-202ENST00000319170 ZSCAN25Q6NSZ9 544 aa16.61■□□□□ 0.25
RAPH1-202ENST00000319170 CCDC148Q8NFR7 591 aa16.61■□□□□ 0.25
RAPH1-202ENST00000319170 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
RAPH1-202ENST00000319170 EPB41L2O43491 1005 aaKnown RBP16.61■□□□□ 0.25
RAPH1-202ENST00000319170 CCDC91Q7Z6B0 441 aa16.61■□□□□ 0.25
RAPH1-202ENST00000319170 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
RAPH1-202ENST00000319170 CWC27Q6UX04 472 aaKnown RBP16.61■□□□□ 0.25
RAPH1-202ENST00000319170 HECW1Q76N89 1606 aa16.6■□□□□ 0.25
RAPH1-202ENST00000319170 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
RAPH1-202ENST00000319170 PKNOX2Q96KN3 472 aa16.6■□□□□ 0.25
RAPH1-202ENST00000319170 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
RAPH1-202ENST00000319170 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
RAPH1-202ENST00000319170 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
RAPH1-202ENST00000319170 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
RAPH1-202ENST00000319170 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
RAPH1-202ENST00000319170 BMP2KQ9NSY1 1161 aaPredicted RBP16.59■□□□□ 0.25
RAPH1-202ENST00000319170 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
RAPH1-202ENST00000319170 TAF4BQ92750 862 aa16.59■□□□□ 0.25
RAPH1-202ENST00000319170 TRIM21P19474 475 aaKnown RBP16.59■□□□□ 0.25
RAPH1-202ENST00000319170 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
RAPH1-202ENST00000319170 TATP17735 454 aaPredicted RBP16.59■□□□□ 0.25
RAPH1-202ENST00000319170 IBSPP21815 317 aaPredicted RBP16.59■□□□□ 0.25
RAPH1-202ENST00000319170 CASTP20810 708 aaKnown RBP16.59■□□□□ 0.25
RAPH1-202ENST00000319170 SMTNL1A8MU46 457 aa16.58■□□□□ 0.25
RAPH1-202ENST00000319170 CASQ1P31415 396 aa16.58■□□□□ 0.25
RAPH1-202ENST00000319170 DYDC1Q8WWB3 177 aa16.58■□□□□ 0.25
RAPH1-202ENST00000319170 SRCIN1Q9C0H9 1055 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms