RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 SETBP1Q9Y6X0 1596 aa13.23□□□□□ -0.29
HNF4A-201ENST00000316099 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.23□□□□□ -0.29
HNF4A-201ENST00000316099 METP08581 1390 aa13.22□□□□□ -0.29
HNF4A-201ENST00000316099 PREX1Q8TCU6 1659 aa13.22□□□□□ -0.29
HNF4A-201ENST00000316099 A2ML1A8K2U0 1454 aa13.22□□□□□ -0.29
HNF4A-201ENST00000316099 SLC4A10Q6U841 1118 aa13.22□□□□□ -0.29
HNF4A-201ENST00000316099 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
HNF4A-201ENST00000316099 C20orf194Q5TEA3 1177 aa13.21□□□□□ -0.29
HNF4A-201ENST00000316099 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.29
HNF4A-201ENST00000316099 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
HNF4A-201ENST00000316099 ABCC11Q96J66 1382 aa13.21□□□□□ -0.29
HNF4A-201ENST00000316099 GPATCH3Q96I76 525 aa13.21□□□□□ -0.29
HNF4A-201ENST00000316099 CHMP4AQ9BY43 222 aa13.21□□□□□ -0.29
HNF4A-201ENST00000316099 ZFYVE9O95405 1425 aa13.21□□□□□ -0.3
HNF4A-201ENST00000316099 NFE2L2Q16236 605 aa13.21□□□□□ -0.3
HNF4A-201ENST00000316099 PIK3C2BO00750 1634 aa13.21□□□□□ -0.3
HNF4A-201ENST00000316099 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
HNF4A-201ENST00000316099 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
HNF4A-201ENST00000316099 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
HNF4A-201ENST00000316099 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
HNF4A-201ENST00000316099 ALKQ9UM73 1620 aa13.2□□□□□ -0.3
HNF4A-201ENST00000316099 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
HNF4A-201ENST00000316099 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
HNF4A-201ENST00000316099 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
HNF4A-201ENST00000316099 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
HNF4A-201ENST00000316099 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
HNF4A-201ENST00000316099 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
HNF4A-201ENST00000316099 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
HNF4A-201ENST00000316099 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
HNF4A-201ENST00000316099 PPLO60437 1756 aa13.18□□□□□ -0.3
HNF4A-201ENST00000316099 KCNA6P17658 529 aa13.18□□□□□ -0.3
HNF4A-201ENST00000316099 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
HNF4A-201ENST00000316099 TRIM6-TRIM34B2RNG4 842 aa13.18□□□□□ -0.3
HNF4A-201ENST00000316099 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
HNF4A-201ENST00000316099 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
HNF4A-201ENST00000316099 NFKBIBQ15653 356 aa13.18□□□□□ -0.3
HNF4A-201ENST00000316099 ATP6V1DQ9Y5K8 247 aa13.18□□□□□ -0.3
HNF4A-201ENST00000316099 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
HNF4A-201ENST00000316099 AGLP35573 1532 aa13.17□□□□□ -0.3
HNF4A-201ENST00000316099 GAS2L2Q8NHY3 880 aa13.17□□□□□ -0.3
HNF4A-201ENST00000316099 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
HNF4A-201ENST00000316099 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
HNF4A-201ENST00000316099 TEFQ10587 303 aa13.16□□□□□ -0.3
HNF4A-201ENST00000316099 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
HNF4A-201ENST00000316099 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
HNF4A-201ENST00000316099 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
HNF4A-201ENST00000316099 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
HNF4A-201ENST00000316099 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
HNF4A-201ENST00000316099 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
HNF4A-201ENST00000316099 NLRP1Q9C000 1473 aa13.15□□□□□ -0.3
HNF4A-201ENST00000316099 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
HNF4A-201ENST00000316099 AAMPQ13685 434 aa13.15□□□□□ -0.3
HNF4A-201ENST00000316099 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
HNF4A-201ENST00000316099 MTERF4Q7Z6M4 381 aaKnown RBP13.15□□□□□ -0.3
HNF4A-201ENST00000316099 NEURL4Q96JN8 1562 aa13.15□□□□□ -0.31
HNF4A-201ENST00000316099 FOXO3O43524 673 aa13.14□□□□□ -0.31
HNF4A-201ENST00000316099 MRE11P49959 708 aa13.14□□□□□ -0.31
HNF4A-201ENST00000316099 MAP7D2Q96T17 732 aa13.14□□□□□ -0.31
HNF4A-201ENST00000316099 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
HNF4A-201ENST00000316099 KIF3AQ9Y496 699 aa13.14□□□□□ -0.31
HNF4A-201ENST00000316099 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
HNF4A-201ENST00000316099 API5Q9BZZ5 524 aaKnown RBP13.14□□□□□ -0.31
HNF4A-201ENST00000316099 ZNF771Q7L3S4 317 aaPredicted RBP13.14□□□□□ -0.31
HNF4A-201ENST00000316099 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
HNF4A-201ENST00000316099 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
HNF4A-201ENST00000316099 INSRP06213 1382 aa13.13□□□□□ -0.31
HNF4A-201ENST00000316099 MCM10Q7L590 875 aa13.13□□□□□ -0.31
HNF4A-201ENST00000316099 SIRT1Q96EB6 747 aa13.13□□□□□ -0.31
HNF4A-201ENST00000316099 NLRP2Q9NX02 1062 aa13.13□□□□□ -0.31
HNF4A-201ENST00000316099 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
HNF4A-201ENST00000316099 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
HNF4A-201ENST00000316099 TPM2P07951 284 aa13.12□□□□□ -0.31
HNF4A-201ENST00000316099 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
HNF4A-201ENST00000316099 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
HNF4A-201ENST00000316099 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
HNF4A-201ENST00000316099 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
HNF4A-201ENST00000316099 NOC3LQ8WTT2 800 aaKnown RBP13.12□□□□□ -0.31
HNF4A-201ENST00000316099 EVA1CP58658 441 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 TULP4Q9NRJ4 1543 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 GPS2Q13227 327 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 CCDC27Q2M243 656 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 ATF7IPQ6VMQ6 1270 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 KCNH5Q8NCM2 988 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 TMEM131LA2VDJ0 1609 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 ANKRD45Q5TZF3 282 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 RAPGEF4Q8WZA2 1011 aa13.11□□□□□ -0.31
HNF4A-201ENST00000316099 FAM83GA6ND36 823 aa13.1□□□□□ -0.31
HNF4A-201ENST00000316099 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
HNF4A-201ENST00000316099 GOLGA6L19H0YKK7 550 aa13.1□□□□□ -0.31
HNF4A-201ENST00000316099 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
HNF4A-201ENST00000316099 FOXD4L5Q5VV16 416 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-201ENST00000316099 FOXD4L4Q8WXT5 416 aaPredicted RBP13.1□□□□□ -0.31
HNF4A-201ENST00000316099 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
HNF4A-201ENST00000316099 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
HNF4A-201ENST00000316099 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
HNF4A-201ENST00000316099 NUCB2P80303 420 aa13.1□□□□□ -0.31
HNF4A-201ENST00000316099 TPM3P06753 285 aa13.09□□□□□ -0.31
HNF4A-201ENST00000316099 ISY1Q9ULR0 285 aaKnown RBP13.09□□□□□ -0.31
HNF4A-201ENST00000316099 DMRT2Q9Y5R5 561 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms