RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 ABCF2Q9UG63 623 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 DDB1Q16531 1140 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 TRIM29Q14134 588 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 TMEM132AQ24JP5 1023 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 WDR78Q5VTH9 848 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 PIBF1Q8WXW3 757 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 IGHMBP2P38935 993 aaKnown RBP10.99□□□□□ -0.65
CTC1-201ENST00000315684 KDM5BQ9UGL1 1544 aa10.98□□□□□ -0.65
CTC1-201ENST00000315684 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
CTC1-201ENST00000315684 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
CTC1-201ENST00000315684 LRRC59Q96AG4 307 aaKnown RBP10.98□□□□□ -0.65
CTC1-201ENST00000315684 RAI14Q9P0K7 980 aa10.98□□□□□ -0.65
CTC1-201ENST00000315684 SYCP2Q9BX26 1530 aa10.98□□□□□ -0.65
CTC1-201ENST00000315684 DHX29Q7Z478 1369 aaKnown RBP10.98□□□□□ -0.65
CTC1-201ENST00000315684 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
CTC1-201ENST00000315684 KCNA6P17658 529 aa10.98□□□□□ -0.65
CTC1-201ENST00000315684 RUFY2Q8WXA3 655 aa10.98□□□□□ -0.65
CTC1-201ENST00000315684 NPHP3Q7Z494 1330 aa10.97□□□□□ -0.65
CTC1-201ENST00000315684 RALYLQ86SE5 291 aaKnown RBP10.97□□□□□ -0.65
CTC1-201ENST00000315684 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
CTC1-201ENST00000315684 UHRF1BP1LA0JNW5 1464 aa10.97□□□□□ -0.65
CTC1-201ENST00000315684 KIAA2012Q0VF49 1180 aa10.97□□□□□ -0.65
CTC1-201ENST00000315684 ZRANB1Q9UGI0 708 aa10.97□□□□□ -0.65
CTC1-201ENST00000315684 NAIPQ13075 1403 aa10.96□□□□□ -0.65
CTC1-201ENST00000315684 NBPF14Q5TI25 921 aa10.96□□□□□ -0.65
CTC1-201ENST00000315684 TRAPPC8Q9Y2L5 1435 aa10.96□□□□□ -0.65
CTC1-201ENST00000315684 A2MP01023 1474 aa10.96□□□□□ -0.65
CTC1-201ENST00000315684 ROCK1Q13464 1354 aa10.96□□□□□ -0.65
CTC1-201ENST00000315684 RRP1P56182 461 aaKnown RBP10.96□□□□□ -0.66
CTC1-201ENST00000315684 TPD52L1Q16890 204 aaPredicted RBP10.96□□□□□ -0.66
CTC1-201ENST00000315684 RIMS2Q9UQ26 1411 aa10.96□□□□□ -0.66
CTC1-201ENST00000315684 ERC2O15083 957 aa10.96□□□□□ -0.66
CTC1-201ENST00000315684 PNISRQ8TF01 805 aaKnown RBP10.96□□□□□ -0.66
CTC1-201ENST00000315684 ST18O60284 1047 aa10.95□□□□□ -0.66
CTC1-201ENST00000315684 BCAR3O75815 825 aa10.95□□□□□ -0.66
CTC1-201ENST00000315684 ATP2B1P20020 1258 aa10.95□□□□□ -0.66
CTC1-201ENST00000315684 LRP2BPQ9P2M1 347 aa10.95□□□□□ -0.66
CTC1-201ENST00000315684 ZKSCAN1P17029 563 aaPredicted RBP10.95□□□□□ -0.66
CTC1-201ENST00000315684 RBM26Q5T8P6 1007 aaKnown RBP10.95□□□□□ -0.66
CTC1-201ENST00000315684 CLASRPQ8N2M8 674 aaKnown RBP10.95□□□□□ -0.66
CTC1-201ENST00000315684 HTATSF1O43719 755 aaKnown RBP10.95□□□□□ -0.66
CTC1-201ENST00000315684 USP21Q9UK80 565 aa10.95□□□□□ -0.66
CTC1-201ENST00000315684 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
CTC1-201ENST00000315684 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
CTC1-201ENST00000315684 METTL24Q5JXM2 366 aa10.95□□□□□ -0.66
CTC1-201ENST00000315684 POLD1P28340 1107 aa10.94□□□□□ -0.66
CTC1-201ENST00000315684 C19orf44Q9H6X5 657 aa10.94□□□□□ -0.66
CTC1-201ENST00000315684 ZCRB1Q8TBF4 217 aaKnown RBP10.94□□□□□ -0.66
CTC1-201ENST00000315684 ORAI2Q96SN7 254 aa10.94□□□□□ -0.66
CTC1-201ENST00000315684 PLCH2O75038 1416 aa10.94□□□□□ -0.66
CTC1-201ENST00000315684 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
CTC1-201ENST00000315684 CPLX2Q6PUV4 134 aaKnown RBP10.94□□□□□ -0.66
CTC1-201ENST00000315684 ANXA1P04083 346 aa10.94□□□□□ -0.66
CTC1-201ENST00000315684 SRCIN1Q9C0H9 1055 aa10.93□□□□□ -0.66
CTC1-201ENST00000315684 TMOD2Q9NZR1 351 aa10.93□□□□□ -0.66
CTC1-201ENST00000315684 ZNF518AQ6AHZ1 1483 aa10.93□□□□□ -0.66
CTC1-201ENST00000315684 F8W031 263 aaPredicted RBP10.93□□□□□ -0.66
CTC1-201ENST00000315684 IDH1O75874 414 aaKnown RBP10.93□□□□□ -0.66
CTC1-201ENST00000315684 GNAI2P04899 355 aa10.93□□□□□ -0.66
CTC1-201ENST00000315684 NOP58Q9Y2X3 529 aaKnown RBP10.93□□□□□ -0.66
CTC1-201ENST00000315684 NRDCO43847 1150 aa10.92□□□□□ -0.66
CTC1-201ENST00000315684 ANP32EQ9BTT0 268 aa10.92□□□□□ -0.66
CTC1-201ENST00000315684 NBPF6Q5VWK0 638 aa10.92□□□□□ -0.66
CTC1-201ENST00000315684 DUSP27Q5VZP5 1158 aa10.92□□□□□ -0.66
CTC1-201ENST00000315684 NBPF5PQ86XG9 351 aaPredicted RBP10.92□□□□□ -0.66
CTC1-201ENST00000315684 NBPF4Q96M43 638 aa10.92□□□□□ -0.66
CTC1-201ENST00000315684 PBRM1Q86U86 1689 aa10.92□□□□□ -0.66
CTC1-201ENST00000315684 ST5P78524 1137 aa10.92□□□□□ -0.66
CTC1-201ENST00000315684 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
CTC1-201ENST00000315684 FAM83GA6ND36 823 aa10.91□□□□□ -0.66
CTC1-201ENST00000315684 APBA3O96018 575 aa10.91□□□□□ -0.66
CTC1-201ENST00000315684 IFNL2Q8IZJ0 200 aa10.91□□□□□ -0.66
CTC1-201ENST00000315684 GNAI3P08754 354 aa10.91□□□□□ -0.66
CTC1-201ENST00000315684 IL1RAPL2Q9NP60 686 aa10.91□□□□□ -0.66
CTC1-201ENST00000315684 SLC3A2P08195 630 aaKnown RBP10.91□□□□□ -0.66
CTC1-201ENST00000315684 AACSQ86V21 672 aa10.91□□□□□ -0.66
CTC1-201ENST00000315684 SRGAP3O43295 1099 aa10.91□□□□□ -0.66
CTC1-201ENST00000315684 CRACR2BQ8N4Y2 399 aaPredicted RBP10.91□□□□□ -0.66
CTC1-201ENST00000315684 CCDC34Q96HJ3 373 aa10.91□□□□□ -0.66
CTC1-201ENST00000315684 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 NUP133Q8WUM0 1156 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 KIF3AQ9Y496 699 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 GPATCH8Q9UKJ3 1502 aaKnown RBP10.9□□□□□ -0.66
CTC1-201ENST00000315684 F6X3S4 739 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 AMOTQ4VCS5 1084 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 RNF20Q5VTR2 975 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 CNTROBQ8N137 903 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 ADAMTS12P58397 1594 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 FAM182BQ5T319 152 aa10.9□□□□□ -0.66
CTC1-201ENST00000315684 TAF7Q15545 349 aaPredicted RBP10.9□□□□□ -0.67
CTC1-201ENST00000315684 BIVM-ERCC5R4GMW8 1640 aa10.9□□□□□ -0.67
CTC1-201ENST00000315684 MSL1Q68DK7 614 aa10.9□□□□□ -0.67
CTC1-201ENST00000315684 CEP126Q9P2H0 1117 aa10.9□□□□□ -0.67
CTC1-201ENST00000315684 USP5P45974 858 aa10.89□□□□□ -0.67
CTC1-201ENST00000315684 PCMTD1Q96MG8 357 aaPredicted RBP10.89□□□□□ -0.67
CTC1-201ENST00000315684 VPS37CA5D8V6 355 aaPredicted RBP10.89□□□□□ -0.67
CTC1-201ENST00000315684 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms