RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 LRRC9Q6ZRR7 1453 aa24.81■■□□□ 1.56
KDM3B-201ENST00000314358 CASKIN1Q8WXD9 1431 aa24.8■■□□□ 1.56
KDM3B-201ENST00000314358 ANKRD50Q9ULJ7 1429 aa24.8■■□□□ 1.56
KDM3B-201ENST00000314358 BCAR3O75815 825 aa24.8■■□□□ 1.56
KDM3B-201ENST00000314358 CCDC69A6NI79 296 aa24.8■■□□□ 1.56
KDM3B-201ENST00000314358 MBD3O95983 291 aa24.8■■□□□ 1.56
KDM3B-201ENST00000314358 SSR1P43307 286 aaKnown RBP24.8■■□□□ 1.56
KDM3B-201ENST00000314358 KIF7Q2M1P5 1343 aa24.79■■□□□ 1.56
KDM3B-201ENST00000314358 NCOA2Q15596 1464 aa24.79■■□□□ 1.56
KDM3B-201ENST00000314358 ABTB2Q8N961 1025 aa24.79■■□□□ 1.56
KDM3B-201ENST00000314358 FKBP4Q02790 459 aaKnown RBP eCLIP24.79■■□□□ 1.56
KDM3B-201ENST00000314358 CCDC158Q5M9N0 1113 aa24.79■■□□□ 1.56
KDM3B-201ENST00000314358 CCP110O43303 1012 aa24.78■■□□□ 1.56
KDM3B-201ENST00000314358 TCP11L2Q8N4U5 519 aa24.78■■□□□ 1.56
KDM3B-201ENST00000314358 PRKAR2BP31323 418 aa24.78■■□□□ 1.56
KDM3B-201ENST00000314358 CCDC112Q8NEF3 446 aa24.78■■□□□ 1.56
KDM3B-201ENST00000314358 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
KDM3B-201ENST00000314358 CCDC97Q96F63 343 aaPredicted RBP24.77■■□□□ 1.56
KDM3B-201ENST00000314358 PKNOX2Q96KN3 472 aa24.77■■□□□ 1.56
KDM3B-201ENST00000314358 CCDC192P0DO97 292 aa24.77■■□□□ 1.56
KDM3B-201ENST00000314358 CYP46A1Q9Y6A2 500 aa24.77■■□□□ 1.56
KDM3B-201ENST00000314358 CCDC102AQ96A19 550 aa24.77■■□□□ 1.56
KDM3B-201ENST00000314358 STAC3Q96MF2 364 aa24.77■■□□□ 1.56
KDM3B-201ENST00000314358 CCDC85AQ96PX6 553 aaPredicted RBP24.77■■□□□ 1.56
KDM3B-201ENST00000314358 SLC4A2P04920 1241 aa24.76■■□□□ 1.55
KDM3B-201ENST00000314358 TWISTNBQ3B726 338 aaPredicted RBP24.76■■□□□ 1.55
KDM3B-201ENST00000314358 FILIP1Q7Z7B0 1213 aa24.76■■□□□ 1.55
KDM3B-201ENST00000314358 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
KDM3B-201ENST00000314358 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
KDM3B-201ENST00000314358 GNAI3P08754 354 aa24.75■■□□□ 1.55
KDM3B-201ENST00000314358 MTERF4Q7Z6M4 381 aaKnown RBP24.75■■□□□ 1.55
KDM3B-201ENST00000314358 GNAI2P04899 355 aa24.75■■□□□ 1.55
KDM3B-201ENST00000314358 CAMK4Q16566 473 aa24.74■■□□□ 1.55
KDM3B-201ENST00000314358 PROSER2Q86WR7 435 aaPredicted RBP24.74■■□□□ 1.55
KDM3B-201ENST00000314358 DDX54Q8TDD1 881 aaKnown RBP24.74■■□□□ 1.55
KDM3B-201ENST00000314358 TMX1Q9H3N1 280 aa24.74■■□□□ 1.55
KDM3B-201ENST00000314358 PDCP20941 246 aa24.74■■□□□ 1.55
KDM3B-201ENST00000314358 LARP1BQ659C4 914 aaKnown RBP24.74■■□□□ 1.55
KDM3B-201ENST00000314358 RABEP1Q15276 862 aa24.73■■□□□ 1.55
KDM3B-201ENST00000314358 PRDM10Q9NQV6 1147 aa24.73■■□□□ 1.55
KDM3B-201ENST00000314358 CHMP4BP1P59074 171 aa24.73■■□□□ 1.55
KDM3B-201ENST00000314358 STIM1Q13586 685 aa24.72■■□□□ 1.55
KDM3B-201ENST00000314358 CWC27Q6UX04 472 aaKnown RBP24.72■■□□□ 1.55
KDM3B-201ENST00000314358 AFAP1Q8N556 730 aa24.72■■□□□ 1.55
KDM3B-201ENST00000314358 GRPEL1Q9HAV7 217 aa24.71■■□□□ 1.55
KDM3B-201ENST00000314358 USP5P45974 858 aa24.71■■□□□ 1.55
KDM3B-201ENST00000314358 DDX11Q96FC9 970 aa24.71■■□□□ 1.55
KDM3B-201ENST00000314358 MIA2Q96PC5 1412 aa24.71■■□□□ 1.55
KDM3B-201ENST00000314358 TXNDC2Q86VQ3 553 aa24.71■■□□□ 1.55
KDM3B-201ENST00000314358 TRIM22Q8IYM9 498 aa24.71■■□□□ 1.55
KDM3B-201ENST00000314358 ZSCAN29Q8IWY8 852 aaPredicted RBP24.7■■□□□ 1.54
KDM3B-201ENST00000314358 CCDC7Q96M83 1385 aa24.7■■□□□ 1.54
KDM3B-201ENST00000314358 SOGA3Q5TF21 947 aa24.7■■□□□ 1.54
KDM3B-201ENST00000314358 DCAF8L1A6NGE4 600 aa24.7■■□□□ 1.54
KDM3B-201ENST00000314358 ANKRD18AQ8IVF6 992 aa24.7■■□□□ 1.54
KDM3B-201ENST00000314358 CCDC113Q9H0I3 377 aa24.69■■□□□ 1.54
KDM3B-201ENST00000314358 HIP1O00291 1037 aa24.69■■□□□ 1.54
KDM3B-201ENST00000314358 NEBLO76041 1014 aa24.69■■□□□ 1.54
KDM3B-201ENST00000314358 NESP48681 1621 aa24.69■■□□□ 1.54
KDM3B-201ENST00000314358 DNA2P51530 1060 aa24.69■■□□□ 1.54
KDM3B-201ENST00000314358 SPATA32Q96LK8 384 aa24.69■■□□□ 1.54
KDM3B-201ENST00000314358 LRRCC1Q9C099 1032 aa24.69■■□□□ 1.54
KDM3B-201ENST00000314358 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.69■■□□□ 1.541e-6■■■■■ 28.1
KDM3B-201ENST00000314358 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
KDM3B-201ENST00000314358 KIAA1328Q86T90 577 aa24.68■■□□□ 1.54
KDM3B-201ENST00000314358 PIP4K2AP48426 406 aaPredicted RBP24.68■■□□□ 1.54
KDM3B-201ENST00000314358 C11orf95C9JLR9 678 aaPredicted RBP24.68■■□□□ 1.54
KDM3B-201ENST00000314358 CFTRP13569 1480 aa24.68■■□□□ 1.54
KDM3B-201ENST00000314358 JMYQ8N9B5 988 aa24.68■■□□□ 1.54
KDM3B-201ENST00000314358 HDGFL1Q5TGJ6 251 aa24.67■■□□□ 1.54
KDM3B-201ENST00000314358 AACSQ86V21 672 aa24.67■■□□□ 1.54
KDM3B-201ENST00000314358 JAKMIP1Q96N16 626 aaKnown RBP24.67■■□□□ 1.54
KDM3B-201ENST00000314358 IL1RAPL2Q9NP60 686 aa24.67■■□□□ 1.54
KDM3B-201ENST00000314358 HMGN5P82970 282 aaKnown RBP24.67■■□□□ 1.54
KDM3B-201ENST00000314358 CNTLNQ9NXG0 1405 aa24.67■■□□□ 1.54
KDM3B-201ENST00000314358 K7ELQ4 463 aaPredicted RBP24.67■■□□□ 1.54
KDM3B-201ENST00000314358 DHX8Q14562 1220 aaKnown RBP24.67■■□□□ 1.54
KDM3B-201ENST00000314358 BICDL1Q6ZP65 573 aa24.67■■□□□ 1.54
KDM3B-201ENST00000314358 GOLGA6L7A0A1B0GV03 622 aa24.67■■□□□ 1.54
KDM3B-201ENST00000314358 GBP2P32456 591 aaPredicted RBP24.66■■□□□ 1.54
KDM3B-201ENST00000314358 KRT85P78386 507 aa24.66■■□□□ 1.54
KDM3B-201ENST00000314358 MPHOSPH10O00566 681 aaKnown RBP24.66■■□□□ 1.54
KDM3B-201ENST00000314358 GNL3LQ9NVN8 582 aaKnown RBP24.66■■□□□ 1.54
KDM3B-201ENST00000314358 DACH1Q9UI36 760 aa24.66■■□□□ 1.54
KDM3B-201ENST00000314358 GPRASP1Q5JY77 1395 aa24.66■■□□□ 1.54
KDM3B-201ENST00000314358 ZNF76P36508 570 aa24.65■■□□□ 1.54
KDM3B-201ENST00000314358 MCM2P49736 904 aa24.65■■□□□ 1.54
KDM3B-201ENST00000314358 PDRG1Q9NUG6 133 aa24.65■■□□□ 1.54
KDM3B-201ENST00000314358 TDO2P48775 406 aa24.65■■□□□ 1.54
KDM3B-201ENST00000314358 XPCQ01831 940 aaPredicted RBP24.65■■□□□ 1.54
KDM3B-201ENST00000314358 GOLGA6L10A0A0M3HER8 536 aa24.64■■□□□ 1.54
KDM3B-201ENST00000314358 AKNAQ7Z591 1439 aa24.64■■□□□ 1.54
KDM3B-201ENST00000314358 EIF5P55010 431 aaKnown RBP24.64■■□□□ 1.54
KDM3B-201ENST00000314358 ERC1Q8IUD2 1116 aa24.64■■□□□ 1.54
KDM3B-201ENST00000314358 LUC7LQ9NQ29 371 aaKnown RBP24.64■■□□□ 1.54
KDM3B-201ENST00000314358 ERLIN1O75477 346 aa24.64■■□□□ 1.53
KDM3B-201ENST00000314358 CABP4P57796 275 aa24.64■■□□□ 1.53
KDM3B-201ENST00000314358 SF3B2Q13435 895 aaKnown RBP24.63■■□□□ 1.53
KDM3B-201ENST00000314358 EIF3JO75822 258 aaKnown RBP24.63■■□□□ 1.53
KDM3B-201ENST00000314358 PLEKHO1Q53GL0 409 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms