RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 CCDC27Q2M243 656 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
PRKDC-201ENST00000314191 MPRIPQ6WCQ1 1025 aa7.57□□□□□ -1.2
PRKDC-201ENST00000314191 IL16Q14005 1332 aa7.57□□□□□ -1.2
PRKDC-201ENST00000314191 MAP4K4O95819 1239 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-201ENST00000314191 YTHDC2Q9H6S0 1430 aaKnown RBP7.57□□□□□ -1.2
PRKDC-201ENST00000314191 ATP10AO60312 1499 aa7.57□□□□□ -1.2
PRKDC-201ENST00000314191 BTBD11A6QL63 1104 aa7.57□□□□□ -1.2
PRKDC-201ENST00000314191 NAP1L5Q96NT1 182 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-201ENST00000314191 LRRCC1Q9C099 1032 aa7.57□□□□□ -1.2
PRKDC-201ENST00000314191 DDX11L8A8MPP1 907 aa7.57□□□□□ -1.2
PRKDC-201ENST00000314191 CLASRPQ8N2M8 674 aaKnown RBP7.57□□□□□ -1.2
PRKDC-201ENST00000314191 STRN4Q9NRL3 753 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 KCNH5Q8NCM2 988 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 TOM1L2Q6ZVM7 507 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 SRGAP3O43295 1099 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 KCNA6P17658 529 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 NEK4P51957 841 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 PPIP5K1Q6PFW1 1433 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 MYL6BP14649 208 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 RUFY2Q8WXA3 655 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 SIL1Q9H173 461 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 CABP4P57796 275 aa7.56□□□□□ -1.2
PRKDC-201ENST00000314191 MTHFSDQ2M296 383 aaKnown RBP7.56□□□□□ -1.2
PRKDC-201ENST00000314191 NPC1L1Q9UHC9 1359 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
PRKDC-201ENST00000314191 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 MEIS3Q99687 375 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 RBM42Q9BTD8 480 aaKnown RBP7.55□□□□□ -1.2
PRKDC-201ENST00000314191 MAGI2Q86UL8 1455 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 KRT28Q7Z3Y7 464 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 ATP7AQ04656 1500 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 TOMM22Q9NS69 142 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 ERC2O15083 957 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 TAF7Q15545 349 aaPredicted RBP7.55□□□□□ -1.2
PRKDC-201ENST00000314191 FAM177BA6PVY3 158 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 VAMP4O75379 141 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 DNAJC2Q99543 621 aaKnown RBP7.55□□□□□ -1.2
PRKDC-201ENST00000314191 ITSN2Q9NZM3 1697 aa7.55□□□□□ -1.2
PRKDC-201ENST00000314191 ZKSCAN1P17029 563 aaPredicted RBP7.54□□□□□ -1.2
PRKDC-201ENST00000314191 SPG7Q9UQ90 795 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 ANXA1P04083 346 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 NUTM1Q86Y26 1132 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 MRPL50Q8N5N7 158 aaKnown RBP7.54□□□□□ -1.2
PRKDC-201ENST00000314191 EYA1Q99502 592 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 PRDM11Q9NQV5 511 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 ERCC6L2Q5T890 1561 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 MCTP1Q6DN14 999 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 FLIIQ13045 1269 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 TRIM35Q9UPQ4 493 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 TBX22Q9Y458 520 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 SAMD9LQ8IVG5 1584 aa7.54□□□□□ -1.2
PRKDC-201ENST00000314191 SKOR2Q2VWA4 1001 aaPredicted RBP7.53□□□□□ -1.2
PRKDC-201ENST00000314191 MAP3K19Q56UN5 1328 aa7.53□□□□□ -1.2
PRKDC-201ENST00000314191 PTPRTO14522 1441 aa7.53□□□□□ -1.2
PRKDC-201ENST00000314191 GNL2Q13823 731 aaKnown RBP7.53□□□□□ -1.2
PRKDC-201ENST00000314191 C8orf34Q49A92 452 aa7.53□□□□□ -1.2
PRKDC-201ENST00000314191 TRAK2O60296 914 aa7.53□□□□□ -1.2
PRKDC-201ENST00000314191 CHRNA2Q15822 529 aa7.53□□□□□ -1.2
PRKDC-201ENST00000314191 LRRC59Q96AG4 307 aaKnown RBP7.53□□□□□ -1.2
PRKDC-201ENST00000314191 ARHGAP45Q92619 1136 aa7.53□□□□□ -1.2
PRKDC-201ENST00000314191 MSNP26038 577 aaKnown RBP7.53□□□□□ -1.2
PRKDC-201ENST00000314191 FSD1Q9BTV5 496 aa7.53□□□□□ -1.2
PRKDC-201ENST00000314191 RSPH6AQ9H0K4 717 aa7.53□□□□□ -1.2
PRKDC-201ENST00000314191 SYAP1Q96A49 352 aaPredicted RBP7.53□□□□□ -1.2
PRKDC-201ENST00000314191 PTCD1O75127 700 aaKnown RBP7.52□□□□□ -1.21
PRKDC-201ENST00000314191 LTKP29376 864 aa7.52□□□□□ -1.21
PRKDC-201ENST00000314191 ARHGEF5Q12774 1597 aa7.52□□□□□ -1.21
PRKDC-201ENST00000314191 C16orf71Q8IYS4 520 aaPredicted RBP7.52□□□□□ -1.21
PRKDC-201ENST00000314191 IL13P35225 146 aa7.52□□□□□ -1.21
PRKDC-201ENST00000314191 TTC21AQ8NDW8 1320 aa7.52□□□□□ -1.21
PRKDC-201ENST00000314191 HDAC1Q13547 482 aaPredicted RBP7.52□□□□□ -1.21
PRKDC-201ENST00000314191 CNTROBQ8N137 903 aa7.52□□□□□ -1.21
PRKDC-201ENST00000314191 SMC3Q9UQE7 1217 aa7.52□□□□□ -1.21
PRKDC-201ENST00000314191 DRC7Q8IY82 874 aa7.52□□□□□ -1.21
PRKDC-201ENST00000314191 VPS37CA5D8V6 355 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-201ENST00000314191 UGGT1Q9NYU2 1555 aa7.51□□□□□ -1.21
PRKDC-201ENST00000314191 PBRM1Q86U86 1689 aa7.51□□□□□ -1.21
PRKDC-201ENST00000314191 ANKRD24Q8TF21 1146 aa7.51□□□□□ -1.21
PRKDC-201ENST00000314191 NUCB2P80303 420 aa7.51□□□□□ -1.21
PRKDC-201ENST00000314191 RABEP1Q15276 862 aa7.51□□□□□ -1.21
PRKDC-201ENST00000314191 K7ELQ4 463 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-201ENST00000314191 TBC1D2Q9BYX2 928 aa7.51□□□□□ -1.21
PRKDC-201ENST00000314191 FAM184AQ8NB25 1140 aa7.51□□□□□ -1.21
PRKDC-201ENST00000314191 NUTM2BA6NNL0 878 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-201ENST00000314191 NUTM2EB1AL46 878 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-201ENST00000314191 NUTM2AQ8IVF1 878 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-201ENST00000314191 AMOTQ4VCS5 1084 aa7.51□□□□□ -1.21
PRKDC-201ENST00000314191 HTATSF1O43719 755 aaKnown RBP7.5□□□□□ -1.21
PRKDC-201ENST00000314191 LRRFIP2Q9Y608 721 aaKnown RBP7.5□□□□□ -1.21
PRKDC-201ENST00000314191 DNAAF4Q8WXU2 420 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 WASHC4Q2M389 1173 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 GCP02774 474 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 MX1P20591 662 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 CABLES1Q8TDN4 633 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 SEC24BO95487 1268 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 MAST1Q9Y2H9 1570 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 TSHZ3Q63HK5 1081 aa7.5□□□□□ -1.21
PRKDC-201ENST00000314191 PRPF40AO75400 957 aaKnown RBP7.5□□□□□ -1.21
PRKDC-201ENST00000314191 NUCB1Q02818 461 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms