RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TWISTNBQ3B726 338 aaPredicted RBP31.88■■■□□ 2.69
HOXB3-201ENST00000311626 CPS1P31327 1500 aa31.87■■■□□ 2.69
HOXB3-201ENST00000311626 CPSF1Q10570 1443 aaKnown RBP31.86■■■□□ 2.69
HOXB3-201ENST00000311626 AEBP1Q8IUX7 1158 aa31.86■■■□□ 2.69
HOXB3-201ENST00000311626 CDC42BPGQ6DT37 1551 aa31.86■■■□□ 2.69
HOXB3-201ENST00000311626 SIRT2Q8IXJ6 389 aa31.85■■■□□ 2.69
HOXB3-201ENST00000311626 IFT57Q9NWB7 429 aa31.85■■■□□ 2.69
HOXB3-201ENST00000311626 SOX12O15370 315 aa31.85■■■□□ 2.69
HOXB3-201ENST00000311626 EDC4Q6P2E9 1401 aaKnown RBP31.85■■■□□ 2.69
HOXB3-201ENST00000311626 RIMBP3CA6NJZ7 1639 aa31.84■■■□□ 2.69
HOXB3-201ENST00000311626 RIMBP3BA6NNM3 1639 aa31.84■■■□□ 2.69
HOXB3-201ENST00000311626 RIMBP3Q9UFD9 1639 aa31.84■■■□□ 2.69
HOXB3-201ENST00000311626 KRT24Q2M2I5 525 aa31.84■■■□□ 2.69
HOXB3-201ENST00000311626 ZNF853P0CG23 659 aa31.84■■■□□ 2.69
HOXB3-201ENST00000311626 DLC1Q96QB1 1528 aa31.83■■■□□ 2.69
HOXB3-201ENST00000311626 CCDC61Q9Y6R9 512 aa31.83■■■□□ 2.69
HOXB3-201ENST00000311626 PRR36Q9H6K5 1346 aa31.81■■■□□ 2.68
HOXB3-201ENST00000311626 SETD1AO15047 1707 aaKnown RBP31.81■■■□□ 2.68
HOXB3-201ENST00000311626 GZF1Q9H116 711 aaPredicted RBP31.8■■■□□ 2.68
HOXB3-201ENST00000311626 ESF1Q9H501 851 aaKnown RBP31.8■■■□□ 2.68
HOXB3-201ENST00000311626 CALD1Q05682 793 aaKnown RBP31.8■■■□□ 2.68
HOXB3-201ENST00000311626 BRPF1P55201 1214 aaPredicted RBP31.79■■■□□ 2.68
HOXB3-201ENST00000311626 CFAP44Q96MT7 982 aa31.79■■■□□ 2.68
HOXB3-201ENST00000311626 SPATA31D1Q6ZQQ2 1576 aa31.78■■■□□ 2.68
HOXB3-201ENST00000311626 SULT6B1Q6IMI4 303 aa31.77■■■□□ 2.68
HOXB3-201ENST00000311626 HSCBQ8IWL3 235 aa31.77■■■□□ 2.68
HOXB3-201ENST00000311626 ZNF428Q96B54 188 aa31.77■■■□□ 2.68
HOXB3-201ENST00000311626 DIP2BQ9P265 1576 aa31.77■■■□□ 2.68
HOXB3-201ENST00000311626 NRXN3Q9Y4C0 1643 aa31.76■■■□□ 2.67
HOXB3-201ENST00000311626 PPP6R1Q9UPN7 881 aa31.76■■■□□ 2.67
HOXB3-201ENST00000311626 ARHGAP45Q92619 1136 aa31.75■■■□□ 2.67
HOXB3-201ENST00000311626 MCM10Q7L590 875 aa31.75■■■□□ 2.67
HOXB3-201ENST00000311626 CDK12Q9NYV4 1490 aaPredicted RBP31.75■■■□□ 2.67
HOXB3-201ENST00000311626 ABCC4O15439 1325 aa31.74■■■□□ 2.67
HOXB3-201ENST00000311626 PTCH1Q13635 1447 aa31.74■■■□□ 2.67
HOXB3-201ENST00000311626 MCM4P33991 863 aa31.74■■■□□ 2.67
HOXB3-201ENST00000311626 FOXD4L1Q9NU39 408 aa31.74■■■□□ 2.67
HOXB3-201ENST00000311626 EIF4A2Q14240 407 aaKnown RBP31.73■■■□□ 2.67
HOXB3-201ENST00000311626 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.73■■■□□ 2.67
HOXB3-201ENST00000311626 CHMP5Q9NZZ3 219 aa31.72■■■□□ 2.67
HOXB3-201ENST00000311626 DLG5Q8TDM6 1919 aa31.72■■■□□ 2.67
HOXB3-201ENST00000311626 GCC1Q96CN9 775 aa31.72■■■□□ 2.67
HOXB3-201ENST00000311626 ANO8Q9HCE9 1232 aaPredicted RBP31.72■■■□□ 2.67
HOXB3-201ENST00000311626 BMP2KLQ5H9B9 411 aa31.71■■■□□ 2.67
HOXB3-201ENST00000311626 AATKQ6ZMQ8 1374 aa31.71■■■□□ 2.67
HOXB3-201ENST00000311626 AGLP35573 1532 aa31.71■■■□□ 2.67
HOXB3-201ENST00000311626 LMOD3Q0VAK6 560 aa31.7■■■□□ 2.66
HOXB3-201ENST00000311626 PLPPR3Q6T4P5 718 aa31.7■■■□□ 2.66
HOXB3-201ENST00000311626 TBC1D9Q6ZT07 1266 aa31.7■■■□□ 2.66
HOXB3-201ENST00000311626 RBM42Q9BTD8 480 aaKnown RBP31.7■■■□□ 2.66
HOXB3-201ENST00000311626 PIK3R4Q99570 1358 aa31.69■■■□□ 2.66
HOXB3-201ENST00000311626 ROBO2Q9HCK4 1378 aa31.69■■■□□ 2.66
HOXB3-201ENST00000311626 RBM25P49756 843 aaKnown RBP31.69■■■□□ 2.66
HOXB3-201ENST00000311626 HSP90AB2PQ58FF8 381 aa31.69■■■□□ 2.66
HOXB3-201ENST00000311626 MIS18AQ9NYP9 233 aa31.69■■■□□ 2.66
HOXB3-201ENST00000311626 CD2BP2O95400 341 aaKnown RBP31.68■■■□□ 2.66
HOXB3-201ENST00000311626 C16orf71Q8IYS4 520 aaPredicted RBP31.68■■■□□ 2.66
HOXB3-201ENST00000311626 APBB1O00213 710 aa31.67■■■□□ 2.66
HOXB3-201ENST00000311626 API5Q9BZZ5 524 aaKnown RBP31.66■■■□□ 2.66
HOXB3-201ENST00000311626 KIF2CQ99661 725 aa31.66■■■□□ 2.66
HOXB3-201ENST00000311626 ZNF692Q9BU19 519 aaPredicted RBP31.66■■■□□ 2.66
HOXB3-201ENST00000311626 ACEP12821 1306 aa31.66■■■□□ 2.66
HOXB3-201ENST00000311626 TTC21BQ7Z4L5 1316 aa31.65■■■□□ 2.66
HOXB3-201ENST00000311626 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.64■■■□□ 2.66
HOXB3-201ENST00000311626 CHMP4BQ9H444 224 aaKnown RBP31.63■■■□□ 2.65
HOXB3-201ENST00000311626 HSP90AB1P08238 724 aaKnown RBP31.62■■■□□ 2.65
HOXB3-201ENST00000311626 SLC26A8Q96RN1 970 aa31.62■■■□□ 2.65
HOXB3-201ENST00000311626 FOXO3O43524 673 aa31.61■■■□□ 2.65
HOXB3-201ENST00000311626 GSPT1P15170 499 aaKnown RBP31.61■■■□□ 2.65
HOXB3-201ENST00000311626 OTUD7AQ8TE49 926 aaPredicted RBP31.61■■■□□ 2.65
HOXB3-201ENST00000311626 REREQ9P2R6 1566 aa31.61■■■□□ 2.65
HOXB3-201ENST00000311626 TRAK2O60296 914 aa31.6■■■□□ 2.65
HOXB3-201ENST00000311626 PRKCSHP14314 528 aaPredicted RBP31.6■■■□□ 2.65
HOXB3-201ENST00000311626 LTKP29376 864 aa31.59■■■□□ 2.65
HOXB3-201ENST00000311626 SMARCA5O60264 1052 aaPredicted RBP31.59■■■□□ 2.65
HOXB3-201ENST00000311626 MON2Q7Z3U7 1717 aa31.58■■■□□ 2.65
HOXB3-201ENST00000311626 PLEKHM2Q8IWE5 1019 aa31.58■■■□□ 2.65
HOXB3-201ENST00000311626 HDGFP51858 240 aaKnown RBP31.57■■■□□ 2.64
HOXB3-201ENST00000311626 TNRQ92752 1358 aa31.57■■■□□ 2.64
HOXB3-201ENST00000311626 CEBPAP49715 358 aaPredicted RBP31.57■■■□□ 2.64
HOXB3-201ENST00000311626 SNX21Q969T3 373 aa31.56■■■□□ 2.64
HOXB3-201ENST00000311626 KNDC1Q76NI1 1749 aa31.56■■■□□ 2.64
HOXB3-201ENST00000311626 C3P01024 1663 aa31.56■■■□□ 2.64
HOXB3-201ENST00000311626 CHL1O00533 1208 aa31.55■■■□□ 2.64
HOXB3-201ENST00000311626 HSP90AA1P07900 732 aaKnown RBP31.54■■■□□ 2.64
HOXB3-201ENST00000311626 DDIT3P35638 169 aa31.54■■■□□ 2.64
HOXB3-201ENST00000311626 TMEM2Q9UHN6 1383 aa31.54■■■□□ 2.64
HOXB3-201ENST00000311626 TNPO1Q92973 898 aaKnown RBP31.53■■■□□ 2.64
HOXB3-201ENST00000311626 SIRT1Q96EB6 747 aa31.53■■■□□ 2.64
HOXB3-201ENST00000311626 MEIS3Q99687 375 aa31.53■■■□□ 2.64
HOXB3-201ENST00000311626 PANK2Q9BZ23 570 aa31.53■■■□□ 2.64
HOXB3-201ENST00000311626 DCTPP1Q9H773 170 aa31.53■■■□□ 2.64
HOXB3-201ENST00000311626 ITSN1Q15811 1721 aa31.52■■■□□ 2.64
HOXB3-201ENST00000311626 XRCC6P12956 609 aaKnown RBP eCLIP31.52■■■□□ 2.64
HOXB3-201ENST00000311626 INTS3Q68E01 1043 aaKnown RBP31.52■■■□□ 2.64
HOXB3-201ENST00000311626 CDC45O75419 566 aa31.52■■■□□ 2.64
HOXB3-201ENST00000311626 AKAP12Q02952 1782 aa31.52■■■□□ 2.64
HOXB3-201ENST00000311626 TECPR2O15040 1411 aa31.51■■■□□ 2.64
HOXB3-201ENST00000311626 GOLGA6L3A6NEY3 463 aa31.51■■■□□ 2.63
HOXB3-201ENST00000311626 SLC4A2P04920 1241 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms