RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
CDC40-201ENST00000307731 ANKRD24Q8TF21 1146 aa9.61□□□□□ -0.87
CDC40-201ENST00000307731 TEFQ10587 303 aa9.6□□□□□ -0.87
CDC40-201ENST00000307731 GAS2L2Q8NHY3 880 aa9.6□□□□□ -0.87
CDC40-201ENST00000307731 DCCP43146 1447 aa9.6□□□□□ -0.87
CDC40-201ENST00000307731 PLEKHO1Q53GL0 409 aaPredicted RBP9.6□□□□□ -0.87
CDC40-201ENST00000307731 NPM2Q86SE8 214 aaKnown RBP9.6□□□□□ -0.87
CDC40-201ENST00000307731 NGLY1Q96IV0 654 aa9.6□□□□□ -0.87
CDC40-201ENST00000307731 CPSF1Q10570 1443 aaKnown RBP9.59□□□□□ -0.87
CDC40-201ENST00000307731 ITSN1Q15811 1721 aa9.59□□□□□ -0.87
CDC40-201ENST00000307731 EIF4A2Q14240 407 aaKnown RBP9.59□□□□□ -0.87
CDC40-201ENST00000307731 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
CDC40-201ENST00000307731 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
CDC40-201ENST00000307731 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.59□□□□□ -0.87
CDC40-201ENST00000307731 HOXC9P31274 260 aa9.59□□□□□ -0.87
CDC40-201ENST00000307731 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
CDC40-201ENST00000307731 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
CDC40-201ENST00000307731 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
CDC40-201ENST00000307731 SBNO1A3KN83 1393 aa9.59□□□□□ -0.87
CDC40-201ENST00000307731 XRN1Q8IZH2 1706 aaKnown RBP9.58□□□□□ -0.88
CDC40-201ENST00000307731 ZNF530Q6P9A1 599 aaPredicted RBP9.58□□□□□ -0.88
CDC40-201ENST00000307731 IP6K1Q92551 441 aa9.58□□□□□ -0.88
CDC40-201ENST00000307731 LRRC7Q96NW7 1537 aa9.58□□□□□ -0.88
CDC40-201ENST00000307731 MST1RQ04912 1400 aa9.58□□□□□ -0.88
CDC40-201ENST00000307731 SPATA31A3Q5VYP0 1347 aa9.57□□□□□ -0.88
CDC40-201ENST00000307731 E9PSI1 815 aa9.57□□□□□ -0.88
CDC40-201ENST00000307731 FRAT1Q92837 279 aaPredicted RBP9.57□□□□□ -0.88
CDC40-201ENST00000307731 SETD1AO15047 1707 aaKnown RBP9.56□□□□□ -0.88
CDC40-201ENST00000307731 C8orf37Q96NL8 207 aa9.56□□□□□ -0.88
CDC40-201ENST00000307731 TMPOP42166 694 aaKnown RBP9.56□□□□□ -0.88
CDC40-201ENST00000307731 NFE2L2Q16236 605 aa9.56□□□□□ -0.88
CDC40-201ENST00000307731 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
CDC40-201ENST00000307731 TNS3Q68CZ2 1445 aa9.56□□□□□ -0.88
CDC40-201ENST00000307731 AATKQ6ZMQ8 1374 aa9.56□□□□□ -0.88
CDC40-201ENST00000307731 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
CDC40-201ENST00000307731 ADGRB2O60241 1585 aa9.56□□□□□ -0.88
CDC40-201ENST00000307731 ARXQ96QS3 562 aa9.55□□□□□ -0.88
CDC40-201ENST00000307731 ELL2O00472 640 aaPredicted RBP9.55□□□□□ -0.88
CDC40-201ENST00000307731 DDX54Q8TDD1 881 aaKnown RBP9.55□□□□□ -0.88
CDC40-201ENST00000307731 EYA1Q99502 592 aa9.55□□□□□ -0.88
CDC40-201ENST00000307731 RCAN3Q9UKA8 241 aa9.55□□□□□ -0.88
CDC40-201ENST00000307731 SYTL4Q96C24 671 aaPredicted RBP9.55□□□□□ -0.88
CDC40-201ENST00000307731 BTG4Q9NY30 223 aa9.55□□□□□ -0.88
CDC40-201ENST00000307731 GNAI1P63096 354 aa9.54□□□□□ -0.88
CDC40-201ENST00000307731 KIAA0232Q92628 1395 aa9.54□□□□□ -0.88
CDC40-201ENST00000307731 CDCA7LQ96GN5 454 aa9.54□□□□□ -0.88
CDC40-201ENST00000307731 MYOM1P52179 1685 aa9.54□□□□□ -0.88
CDC40-201ENST00000307731 IL13P35225 146 aa9.54□□□□□ -0.88
CDC40-201ENST00000307731 FTSJ3Q8IY81 847 aaKnown RBP9.54□□□□□ -0.88
CDC40-201ENST00000307731 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 ARHGEF25Q86VW2 580 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 TSPYL4Q9UJ04 414 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 NALCNQ8IZF0 1738 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 USP31Q70CQ4 1352 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 KAT6BQ8WYB5 2073 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 NWD1Q149M9 1564 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 TTC5Q8N0Z6 440 aa9.53□□□□□ -0.88
CDC40-201ENST00000307731 AMOTQ4VCS5 1084 aa9.52□□□□□ -0.88
CDC40-201ENST00000307731 THUMPD2Q9BTF0 503 aaKnown RBP9.52□□□□□ -0.88
CDC40-201ENST00000307731 INSRP06213 1382 aa9.52□□□□□ -0.89
CDC40-201ENST00000307731 STK31Q9BXU1 1019 aa9.52□□□□□ -0.89
CDC40-201ENST00000307731 SMC4Q9NTJ3 1288 aa9.52□□□□□ -0.89
CDC40-201ENST00000307731 GNAT3A8MTJ3 354 aa9.52□□□□□ -0.89
CDC40-201ENST00000307731 DCTN1Q14203 1278 aa9.52□□□□□ -0.89
CDC40-201ENST00000307731 WWC1Q8IX03 1113 aa9.52□□□□□ -0.89
CDC40-201ENST00000307731 BCL11AQ9H165 835 aa9.52□□□□□ -0.89
CDC40-201ENST00000307731 MCM10Q7L590 875 aa9.51□□□□□ -0.89
CDC40-201ENST00000307731 OVOS2A0A0J9YW53 1432 aa9.51□□□□□ -0.89
CDC40-201ENST00000307731 OVOS2Q6IE36 1432 aa9.51□□□□□ -0.89
CDC40-201ENST00000307731 RTL1A6NKG5 1358 aa9.51□□□□□ -0.89
CDC40-201ENST00000307731 WDR63Q8IWG1 891 aa9.51□□□□□ -0.89
CDC40-201ENST00000307731 BCL2L13Q9BXK5 485 aa9.51□□□□□ -0.89
CDC40-201ENST00000307731 CHMP4AQ9BY43 222 aa9.51□□□□□ -0.89
CDC40-201ENST00000307731 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
CDC40-201ENST00000307731 ZBTB47Q9UFB7 747 aaPredicted RBP9.51□□□□□ -0.89
CDC40-201ENST00000307731 CDK12Q9NYV4 1490 aaPredicted RBP9.51□□□□□ -0.89
CDC40-201ENST00000307731 SOS2Q07890 1332 aaPredicted RBP9.5□□□□□ -0.89
CDC40-201ENST00000307731 HSP90AB1P08238 724 aaKnown RBP9.5□□□□□ -0.89
CDC40-201ENST00000307731 NBPF6Q5VWK0 638 aa9.5□□□□□ -0.89
CDC40-201ENST00000307731 TSR2Q969E8 191 aaKnown RBP9.5□□□□□ -0.89
CDC40-201ENST00000307731 NBPF4Q96M43 638 aa9.5□□□□□ -0.89
CDC40-201ENST00000307731 ZNF330Q9Y3S2 320 aaPredicted RBP9.5□□□□□ -0.89
CDC40-201ENST00000307731 RGPD8O14715 1765 aaPredicted RBP9.5□□□□□ -0.89
CDC40-201ENST00000307731 KIF20BQ96Q89 1820 aa9.5□□□□□ -0.89
CDC40-201ENST00000307731 KIF1AQ12756 1690 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 PHACTR3Q96KR7 559 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 KIF24Q5T7B8 1368 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 MS4A1P11836 297 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 MPRIPQ6WCQ1 1025 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 STRCQ7RTU9 1775 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 FAM83GA6ND36 823 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 EXOC5O00471 708 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 IL2RBP14784 551 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 CABP4P57796 275 aa9.49□□□□□ -0.89
CDC40-201ENST00000307731 TCERG1O14776 1098 aaKnown RBP9.48□□□□□ -0.89
CDC40-201ENST00000307731 IPO8O15397 1037 aaKnown RBP9.48□□□□□ -0.89
CDC40-201ENST00000307731 EIF2S2P20042 333 aaKnown RBP9.48□□□□□ -0.89
CDC40-201ENST00000307731 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
CDC40-201ENST00000307731 CCDC136Q96JN2 1154 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms