RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 SURF6O75683 361 aaKnown RBP16.24■□□□□ 0.19
SEC23A-201ENST00000307712 MAP4K4O95819 1239 aaPredicted RBP16.24■□□□□ 0.19
SEC23A-201ENST00000307712 ZGPATQ8N5A5 531 aaKnown RBP16.24■□□□□ 0.19
SEC23A-201ENST00000307712 C14orf93Q9H972 538 aaKnown RBP16.24■□□□□ 0.19
SEC23A-201ENST00000307712 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
SEC23A-201ENST00000307712 GNAI2P04899 355 aa16.24■□□□□ 0.19
SEC23A-201ENST00000307712 ZKSCAN1P17029 563 aaPredicted RBP16.24■□□□□ 0.19
SEC23A-201ENST00000307712 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
SEC23A-201ENST00000307712 BECN2A8MW95 431 aa16.24■□□□□ 0.19
SEC23A-201ENST00000307712 HDGFP51858 240 aaKnown RBP16.23■□□□□ 0.19
SEC23A-201ENST00000307712 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
SEC23A-201ENST00000307712 NGDNQ8NEJ9 315 aaKnown RBP16.23■□□□□ 0.19
SEC23A-201ENST00000307712 IL16Q14005 1332 aa16.23■□□□□ 0.19
SEC23A-201ENST00000307712 EMILIN1Q9Y6C2 1016 aa16.23■□□□□ 0.19
SEC23A-201ENST00000307712 TSHZ3Q63HK5 1081 aa16.23■□□□□ 0.19
SEC23A-201ENST00000307712 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
SEC23A-201ENST00000307712 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
SEC23A-201ENST00000307712 SDSP20132 328 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 RUFY2Q8WXA3 655 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 IL1RAPL2Q9NP60 686 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.22■□□□□ 0.19
SEC23A-201ENST00000307712 H3BQV1 296 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 EIF2AK4Q9P2K8 1649 aaKnown RBP16.22■□□□□ 0.19
SEC23A-201ENST00000307712 FAM83GA6ND36 823 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
SEC23A-201ENST00000307712 MBIPQ9NS73 344 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
SEC23A-201ENST00000307712 GNAI3P08754 354 aa16.21■□□□□ 0.19
SEC23A-201ENST00000307712 RBSNQ9H1K0 784 aa16.21■□□□□ 0.19
SEC23A-201ENST00000307712 ZKSCAN5Q9Y2L8 839 aa16.21■□□□□ 0.19
SEC23A-201ENST00000307712 ZNF830Q96NB3 372 aaPredicted RBP16.21■□□□□ 0.19
SEC23A-201ENST00000307712 CBX1P83916 185 aa16.21■□□□□ 0.19
SEC23A-201ENST00000307712 LRSAM1Q6UWE0 723 aa16.21■□□□□ 0.19
SEC23A-201ENST00000307712 TRIM5Q9C035 493 aa16.21■□□□□ 0.19
SEC23A-201ENST00000307712 FYB1O15117 783 aa16.21■□□□□ 0.18
SEC23A-201ENST00000307712 KIF3AQ9Y496 699 aa16.21■□□□□ 0.18
SEC23A-201ENST00000307712 F6X3S4 739 aa16.2■□□□□ 0.18
SEC23A-201ENST00000307712 MCM10Q7L590 875 aa16.2■□□□□ 0.18
SEC23A-201ENST00000307712 ATAD2Q6PL18 1390 aa16.2■□□□□ 0.18
SEC23A-201ENST00000307712 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
SEC23A-201ENST00000307712 RPGRIP1LQ68CZ1 1315 aa16.2■□□□□ 0.18
SEC23A-201ENST00000307712 WDR7Q9Y4E6 1490 aa16.2■□□□□ 0.18
SEC23A-201ENST00000307712 ZHX1Q9UKY1 873 aaPredicted RBP16.2■□□□□ 0.18
SEC23A-201ENST00000307712 LETM1O95202 739 aaPredicted RBP16.19■□□□□ 0.18
SEC23A-201ENST00000307712 FBXW7Q969H0 707 aa16.19■□□□□ 0.18
SEC23A-201ENST00000307712 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
SEC23A-201ENST00000307712 TMX3Q96JJ7 454 aa16.19■□□□□ 0.18
SEC23A-201ENST00000307712 MRPL50Q8N5N7 158 aaKnown RBP16.19■□□□□ 0.18
SEC23A-201ENST00000307712 CCDC9Q9Y3X0 531 aaKnown RBP16.19■□□□□ 0.18
SEC23A-201ENST00000307712 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
SEC23A-201ENST00000307712 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
SEC23A-201ENST00000307712 DYNC1I1O14576 645 aa16.18■□□□□ 0.18
SEC23A-201ENST00000307712 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
SEC23A-201ENST00000307712 VAMP4O75379 141 aa16.18■□□□□ 0.18
SEC23A-201ENST00000307712 MCM5P33992 734 aa16.18■□□□□ 0.18
SEC23A-201ENST00000307712 C8orf58Q8NAV2 365 aa16.18■□□□□ 0.18
SEC23A-201ENST00000307712 PLEKHM2Q8IWE5 1019 aa16.17■□□□□ 0.18
SEC23A-201ENST00000307712 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
SEC23A-201ENST00000307712 FOSBP53539 338 aa16.17■□□□□ 0.18
SEC23A-201ENST00000307712 C9orf78Q9NZ63 289 aaPredicted RBP16.17■□□□□ 0.18
SEC23A-201ENST00000307712 CD2BP2O95400 341 aaKnown RBP16.17■□□□□ 0.18
SEC23A-201ENST00000307712 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
SEC23A-201ENST00000307712 DUOX2Q9NRD8 1548 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 NSD2O96028 1365 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 NME9Q86XW9 330 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 CNTROBQ8N137 903 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 OTUD7AQ8TE49 926 aaPredicted RBP16.16■□□□□ 0.18
SEC23A-201ENST00000307712 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 MX1P20591 662 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
SEC23A-201ENST00000307712 TPD52L1Q16890 204 aaPredicted RBP16.16■□□□□ 0.18
SEC23A-201ENST00000307712 MEIS3Q99687 375 aa16.16■□□□□ 0.18
SEC23A-201ENST00000307712 HCLS1P14317 486 aaPredicted RBP16.15■□□□□ 0.18
SEC23A-201ENST00000307712 PHACTR3Q96KR7 559 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 ADCY5O95622 1261 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 NUTM1Q86Y26 1132 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 PDCL2Q8N4E4 241 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 USP26Q9BXU7 913 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 ANKRD36BQ8N2N9 1353 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 ERBB4Q15303 1308 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 TPM3P06753 285 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
SEC23A-201ENST00000307712 DDX54Q8TDD1 881 aaKnown RBP16.15■□□□□ 0.18
SEC23A-201ENST00000307712 FERMT3Q86UX7 667 aa16.14■□□□□ 0.17
SEC23A-201ENST00000307712 TTC12Q9H892 705 aaPredicted RBP16.14■□□□□ 0.17
SEC23A-201ENST00000307712 NPHP1O15259 732 aa16.14■□□□□ 0.17
SEC23A-201ENST00000307712 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
SEC23A-201ENST00000307712 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.17
SEC23A-201ENST00000307712 PLA2R1Q13018 1463 aa16.14■□□□□ 0.17
SEC23A-201ENST00000307712 HS1BP3Q53T59 392 aa16.14■□□□□ 0.17
SEC23A-201ENST00000307712 CWC27Q6UX04 472 aaKnown RBP16.14■□□□□ 0.17
SEC23A-201ENST00000307712 CCDC183Q5T5S1 534 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 DCTPP1Q9H773 170 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 PKP1Q13835 747 aa16.13■□□□□ 0.17
SEC23A-201ENST00000307712 CHAMP1Q96JM3 812 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms