RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 NUCB2P80303 420 aa13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 NEXNQ0ZGT2 675 aa13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 TRMT2AQ8IZ69 625 aaKnown RBP13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 AMOTL2Q9Y2J4 779 aa13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 EDC4Q6P2E9 1401 aaKnown RBP13.36□□□□□ -0.27
PCDHGC4-201ENST00000306593 RABEP1Q15276 862 aa13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 C9orf78Q9NZ63 289 aaPredicted RBP13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 C1orf115Q9H7X2 142 aa13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 ZMYM3Q14202 1370 aa13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 PTPRCP08575 1304 aa13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 CEP152O94986 1710 aa13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 CSPP1Q1MSJ5 1256 aa13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 SIRT1Q96EB6 747 aa13.35□□□□□ -0.27
PCDHGC4-201ENST00000306593 THUMPD2Q9BTF0 503 aaKnown RBP13.34□□□□□ -0.27
PCDHGC4-201ENST00000306593 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
PCDHGC4-201ENST00000306593 ACEP12821 1306 aa13.34□□□□□ -0.27
PCDHGC4-201ENST00000306593 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
PCDHGC4-201ENST00000306593 GNAT3A8MTJ3 354 aa13.33□□□□□ -0.27
PCDHGC4-201ENST00000306593 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.27
PCDHGC4-201ENST00000306593 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.27
PCDHGC4-201ENST00000306593 KCNH5Q8NCM2 988 aa13.33□□□□□ -0.27
PCDHGC4-201ENST00000306593 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.27
PCDHGC4-201ENST00000306593 YEATS2Q9ULM3 1422 aa13.33□□□□□ -0.27
PCDHGC4-201ENST00000306593 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
PCDHGC4-201ENST00000306593 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.28
PCDHGC4-201ENST00000306593 SKAP1Q86WV1 359 aa13.33□□□□□ -0.28
PCDHGC4-201ENST00000306593 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
PCDHGC4-201ENST00000306593 RAPGEF4Q8WZA2 1011 aa13.33□□□□□ -0.28
PCDHGC4-201ENST00000306593 GOLGA6L4A6NEF3 574 aa13.33□□□□□ -0.28
PCDHGC4-201ENST00000306593 NECTIN2Q92692 538 aa13.33□□□□□ -0.28
PCDHGC4-201ENST00000306593 MBIPQ9NS73 344 aa13.33□□□□□ -0.28
PCDHGC4-201ENST00000306593 ERC2O15083 957 aa13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 C8orf34Q49A92 452 aa13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 DIAPH3Q9NSV4 1193 aa13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 KIAA1210Q9ULL0 1709 aa13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 ATF3P18847 181 aa13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 MCM2P49736 904 aa13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 HDGFL1Q5TGJ6 251 aa13.32□□□□□ -0.28
PCDHGC4-201ENST00000306593 SRCIN1Q9C0H9 1055 aa13.31□□□□□ -0.28
PCDHGC4-201ENST00000306593 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
PCDHGC4-201ENST00000306593 HTATSF1O43719 755 aaKnown RBP13.31□□□□□ -0.28
PCDHGC4-201ENST00000306593 NEURL4Q96JN8 1562 aa13.31□□□□□ -0.28
PCDHGC4-201ENST00000306593 FRAT2O75474 233 aaPredicted RBP13.31□□□□□ -0.28
PCDHGC4-201ENST00000306593 PHF14O94880 888 aa13.31□□□□□ -0.28
PCDHGC4-201ENST00000306593 GLIPR1L2Q4G1C9 344 aa13.31□□□□□ -0.28
PCDHGC4-201ENST00000306593 RSPH6AQ9H0K4 717 aa13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 ATP6V1DQ9Y5K8 247 aa13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 DDX49Q9Y6V7 483 aaKnown RBP13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 ABCA6Q8N139 1617 aa13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 IFIT2P09913 472 aaKnown RBP13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 MSNP26038 577 aaKnown RBP13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 BMP2KLQ5H9B9 411 aa13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 MCM10Q7L590 875 aa13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
PCDHGC4-201ENST00000306593 ANO2Q9NQ90 1003 aa13.29□□□□□ -0.28
PCDHGC4-201ENST00000306593 TBC1D32Q96NH3 1257 aa13.29□□□□□ -0.28
PCDHGC4-201ENST00000306593 NUCB1Q02818 461 aa13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 G3BP1Q13283 466 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 DCTN1Q14203 1278 aa13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 ERC1Q8IUD2 1116 aa13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 ATP7BP35670 1465 aa13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 RLBP1P12271 317 aa13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 ZKSCAN1P17029 563 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC4-201ENST00000306593 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.28
PCDHGC4-201ENST00000306593 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.28
PCDHGC4-201ENST00000306593 PHF8Q9UPP1 1060 aa13.27□□□□□ -0.28
PCDHGC4-201ENST00000306593 TAF7Q15545 349 aaPredicted RBP13.27□□□□□ -0.29
PCDHGC4-201ENST00000306593 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
PCDHGC4-201ENST00000306593 CNTROBQ8N137 903 aa13.27□□□□□ -0.29
PCDHGC4-201ENST00000306593 IQGAP1P46940 1657 aa13.27□□□□□ -0.29
PCDHGC4-201ENST00000306593 NAP1L5Q96NT1 182 aaPredicted RBP13.27□□□□□ -0.29
PCDHGC4-201ENST00000306593 TRIM35Q9UPQ4 493 aa13.27□□□□□ -0.29
PCDHGC4-201ENST00000306593 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
PCDHGC4-201ENST00000306593 VAMP4O75379 141 aa13.26□□□□□ -0.29
PCDHGC4-201ENST00000306593 SURF6O75683 361 aaKnown RBP13.26□□□□□ -0.29
PCDHGC4-201ENST00000306593 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
PCDHGC4-201ENST00000306593 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
PCDHGC4-201ENST00000306593 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC4-201ENST00000306593 PPRC1Q5VV67 1664 aaKnown RBP13.26□□□□□ -0.29
PCDHGC4-201ENST00000306593 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
PCDHGC4-201ENST00000306593 EIF4A2Q14240 407 aaKnown RBP13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 ZBTB40Q9NUA8 1239 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 FLT4P35916 1363 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 IL13P35225 146 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 CEBPAP49715 358 aaPredicted RBP13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 KIF3AQ9Y496 699 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 TRAK2O60296 914 aa13.25□□□□□ -0.29
PCDHGC4-201ENST00000306593 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms