RNA–Protein interactions for RNA: ENST00000305510.3

CNNM3-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM3, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-201ENST00000305510 NFE2L2Q16236 605 aa22.26■■□□□ 1.15
CNNM3-201ENST00000305510 PPP1R9BQ96SB3 815 aa22.26■■□□□ 1.15
CNNM3-201ENST00000305510 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
CNNM3-201ENST00000305510 NUDT16Q96DE0 195 aaKnown RBP22.25■■□□□ 1.15
CNNM3-201ENST00000305510 TERF1P54274 439 aa22.25■■□□□ 1.15
CNNM3-201ENST00000305510 DDX49Q9Y6V7 483 aaKnown RBP22.25■■□□□ 1.15
CNNM3-201ENST00000305510 SHROOM2Q13796 1616 aa22.25■■□□□ 1.15
CNNM3-201ENST00000305510 FOXD4L6Q3SYB3 417 aaPredicted RBP22.25■■□□□ 1.15
CNNM3-201ENST00000305510 FOXD4L3Q6VB84 417 aaPredicted RBP22.25■■□□□ 1.15
CNNM3-201ENST00000305510 MYOM2P54296 1465 aa22.25■■□□□ 1.15
CNNM3-201ENST00000305510 SBNO2Q9Y2G9 1366 aa22.24■■□□□ 1.15
CNNM3-201ENST00000305510 GNAI1P63096 354 aa22.24■■□□□ 1.15
CNNM3-201ENST00000305510 MTERF4Q7Z6M4 381 aaKnown RBP22.24■■□□□ 1.15
CNNM3-201ENST00000305510 EFCAB6Q5THR3 1501 aa22.23■■□□□ 1.15
CNNM3-201ENST00000305510 VAMP4O75379 141 aa22.23■■□□□ 1.15
CNNM3-201ENST00000305510 ZNF692Q9BU19 519 aaPredicted RBP22.23■■□□□ 1.15
CNNM3-201ENST00000305510 KIF1BO60333 1816 aa22.23■■□□□ 1.15
CNNM3-201ENST00000305510 PPRC1Q5VV67 1664 aaKnown RBP22.21■■□□□ 1.15
CNNM3-201ENST00000305510 CEP152O94986 1710 aa22.21■■□□□ 1.15
CNNM3-201ENST00000305510 POGZQ7Z3K3 1410 aa22.21■■□□□ 1.15
CNNM3-201ENST00000305510 F6X3S4 739 aa22.21■■□□□ 1.15
CNNM3-201ENST00000305510 DMTNQ08495 405 aa22.21■■□□□ 1.15
CNNM3-201ENST00000305510 DYNC1I1O14576 645 aa22.2■■□□□ 1.14
CNNM3-201ENST00000305510 HDAC1Q13547 482 aaPredicted RBP22.2■■□□□ 1.14
CNNM3-201ENST00000305510 TSHZ3Q63HK5 1081 aa22.2■■□□□ 1.14
CNNM3-201ENST00000305510 GOLGA6L22H0YM25 854 aa22.2■■□□□ 1.14
CNNM3-201ENST00000305510 CBX1P83916 185 aa22.2■■□□□ 1.14
CNNM3-201ENST00000305510 MYOM1P52179 1685 aa22.19■■□□□ 1.14
CNNM3-201ENST00000305510 SMC5Q8IY18 1101 aa22.19■■□□□ 1.14
CNNM3-201ENST00000305510 RBM33Q96EV2 1170 aaKnown RBP22.19■■□□□ 1.14
CNNM3-201ENST00000305510 NUCB1Q02818 461 aa22.19■■□□□ 1.14
CNNM3-201ENST00000305510 HSP90AB2PQ58FF8 381 aa22.19■■□□□ 1.14
CNNM3-201ENST00000305510 OTUD7AQ8TE49 926 aaPredicted RBP22.19■■□□□ 1.14
CNNM3-201ENST00000305510 CHMP4BQ9H444 224 aaKnown RBP22.18■■□□□ 1.14
CNNM3-201ENST00000305510 ABCC11Q96J66 1382 aa22.18■■□□□ 1.14
CNNM3-201ENST00000305510 YTHDC2Q9H6S0 1430 aaKnown RBP22.18■■□□□ 1.14
CNNM3-201ENST00000305510 CEBPAP49715 358 aaPredicted RBP22.18■■□□□ 1.14
CNNM3-201ENST00000305510 TBC1D9Q6ZT07 1266 aa22.18■■□□□ 1.14
CNNM3-201ENST00000305510 FOXO3O43524 673 aa22.17■■□□□ 1.14
CNNM3-201ENST00000305510 CT47B1P0C2W7 299 aaPredicted RBP22.17■■□□□ 1.14
CNNM3-201ENST00000305510 GTF2E1P29083 439 aaPredicted RBP22.17■■□□□ 1.14
CNNM3-201ENST00000305510 DNTTIP2Q5QJE6 756 aaKnown RBP22.17■■□□□ 1.14
CNNM3-201ENST00000305510 RTF1Q92541 710 aaKnown RBP22.17■■□□□ 1.14
CNNM3-201ENST00000305510 WASLO00401 505 aaPredicted RBP22.17■■□□□ 1.14
CNNM3-201ENST00000305510 ZBTB7BO15156 539 aaPredicted RBP22.17■■□□□ 1.14
CNNM3-201ENST00000305510 SLC4A2P04920 1241 aa22.17■■□□□ 1.14
CNNM3-201ENST00000305510 CCDC94Q9BW85 323 aaPredicted RBP22.17■■□□□ 1.14
CNNM3-201ENST00000305510 NGDNQ8NEJ9 315 aaKnown RBP22.16■■□□□ 1.14
CNNM3-201ENST00000305510 MROH2AA6NES4 1674 aa22.16■■□□□ 1.14
CNNM3-201ENST00000305510 MRPL50Q8N5N7 158 aaKnown RBP22.16■■□□□ 1.14
CNNM3-201ENST00000305510 ZSCAN20P17040 1043 aaPredicted RBP22.16■■□□□ 1.14
CNNM3-201ENST00000305510 PPP4R3BQ5MIZ7 849 aa22.16■■□□□ 1.14
CNNM3-201ENST00000305510 MPNDQ8N594 471 aa22.16■■□□□ 1.14
CNNM3-201ENST00000305510 TSC1Q92574 1164 aa22.16■■□□□ 1.14
CNNM3-201ENST00000305510 JARID2Q92833 1246 aaPredicted RBP22.16■■□□□ 1.14
CNNM3-201ENST00000305510 CCDC61Q9Y6R9 512 aa22.16■■□□□ 1.14
CNNM3-201ENST00000305510 NOL7Q9UMY1 257 aaKnown RBP22.15■■□□□ 1.14
CNNM3-201ENST00000305510 CD2BP2O95400 341 aaKnown RBP22.15■■□□□ 1.14
CNNM3-201ENST00000305510 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
CNNM3-201ENST00000305510 NAP1L2Q9ULW6 460 aaPredicted RBP22.15■■□□□ 1.14
CNNM3-201ENST00000305510 SSFA2P28290 1259 aa22.14■■□□□ 1.14
CNNM3-201ENST00000305510 AMPHP49418 695 aa22.14■■□□□ 1.14
CNNM3-201ENST00000305510 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.14
CNNM3-201ENST00000305510 NSD2O96028 1365 aa22.14■■□□□ 1.13
CNNM3-201ENST00000305510 CAVIN1Q6NZI2 390 aaKnown RBP22.14■■□□□ 1.13
CNNM3-201ENST00000305510 RAB3GAP1Q15042 981 aa22.13■■□□□ 1.13
CNNM3-201ENST00000305510 UTP14CQ5TAP6 766 aaKnown RBP22.13■■□□□ 1.13
CNNM3-201ENST00000305510 PDIA4P13667 645 aaKnown RBP22.12■■□□□ 1.13
CNNM3-201ENST00000305510 CSPP1Q1MSJ5 1256 aa22.12■■□□□ 1.13
CNNM3-201ENST00000305510 SASS6Q6UVJ0 657 aa22.12■■□□□ 1.13
CNNM3-201ENST00000305510 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
CNNM3-201ENST00000305510 INO80Q9ULG1 1556 aaPredicted RBP22.12■■□□□ 1.13
CNNM3-201ENST00000305510 TULP4Q9NRJ4 1543 aa22.12■■□□□ 1.13
CNNM3-201ENST00000305510 ZNF500O60304 480 aaPredicted RBP22.12■■□□□ 1.13
CNNM3-201ENST00000305510 ALDH1L2Q3SY69 923 aa22.12■■□□□ 1.13
CNNM3-201ENST00000305510 API5Q9BZZ5 524 aaKnown RBP22.12■■□□□ 1.13
CNNM3-201ENST00000305510 TRIM6-TRIM34B2RNG4 842 aa22.11■■□□□ 1.13
CNNM3-201ENST00000305510 PTMSP20962 102 aa22.11■■□□□ 1.13
CNNM3-201ENST00000305510 SIRT2Q8IXJ6 389 aa22.11■■□□□ 1.13
CNNM3-201ENST00000305510 RILPL2Q969X0 211 aa22.11■■□□□ 1.13
CNNM3-201ENST00000305510 TSPYL4Q9UJ04 414 aa22.11■■□□□ 1.13
CNNM3-201ENST00000305510 EXOC6BQ9Y2D4 811 aa22.1■■□□□ 1.13
CNNM3-201ENST00000305510 IL13P35225 146 aa22.1■■□□□ 1.13
CNNM3-201ENST00000305510 LMOD3Q0VAK6 560 aa22.1■■□□□ 1.13
CNNM3-201ENST00000305510 MEIS3Q99687 375 aa22.1■■□□□ 1.13
CNNM3-201ENST00000305510 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.1■■□□□ 1.13
CNNM3-201ENST00000305510 VIRMAQ69YN4 1812 aaKnown RBP22.1■■□□□ 1.13
CNNM3-201ENST00000305510 QRICH2Q9H0J4 1663 aa22.09■■□□□ 1.13
CNNM3-201ENST00000305510 IGSF3O75054 1194 aa22.09■■□□□ 1.13
CNNM3-201ENST00000305510 ZKSCAN5Q9Y2L8 839 aa22.09■■□□□ 1.13
CNNM3-201ENST00000305510 VGLL3A8MV65 326 aa22.09■■□□□ 1.13
CNNM3-201ENST00000305510 CFAP44Q96MT7 982 aa22.09■■□□□ 1.13
CNNM3-201ENST00000305510 CIZ1Q9ULV3 898 aaPredicted RBP22.09■■□□□ 1.13
CNNM3-201ENST00000305510 MROH1Q8NDA8 1641 aa22.08■■□□□ 1.13
CNNM3-201ENST00000305510 PTMAP06454 111 aaKnown RBP22.08■■□□□ 1.13
CNNM3-201ENST00000305510 GCC1Q96CN9 775 aa22.08■■□□□ 1.13
CNNM3-201ENST00000305510 RBSNQ9H1K0 784 aa22.08■■□□□ 1.13
CNNM3-201ENST00000305510 ADGRB3O60242 1522 aa22.08■■□□□ 1.13
CNNM3-201ENST00000305510 ABCC3O15438 1527 aa22.08■■□□□ 1.12
CNNM3-201ENST00000305510 FAM177BA6PVY3 158 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms