RNA–Protein interactions for RNA: ENST00000303657.9

RFX2-201, Transcript of regulatory factor X2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RFX2, Length 3,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-201ENST00000303657 LAMC1P11047 1609 aa13.3□□□□□ -0.28
RFX2-201ENST00000303657 MCM4P33991 863 aa13.3□□□□□ -0.28
RFX2-201ENST00000303657 ANKRD45Q5TZF3 282 aa13.3□□□□□ -0.28
RFX2-201ENST00000303657 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
RFX2-201ENST00000303657 TSPYL6Q8N831 410 aa13.3□□□□□ -0.28
RFX2-201ENST00000303657 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
RFX2-201ENST00000303657 HSP90AB1P08238 724 aaKnown RBP13.3□□□□□ -0.28
RFX2-201ENST00000303657 LMOD3Q0VAK6 560 aa13.3□□□□□ -0.28
RFX2-201ENST00000303657 KRT24Q2M2I5 525 aa13.3□□□□□ -0.28
RFX2-201ENST00000303657 TPRNQ4KMQ1 711 aa13.3□□□□□ -0.28
RFX2-201ENST00000303657 GLI2P10070 1586 aa13.29□□□□□ -0.28
RFX2-201ENST00000303657 TBC1D2Q9BYX2 928 aa13.29□□□□□ -0.28
RFX2-201ENST00000303657 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 CLCN1P35523 988 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 NINLQ9Y2I6 1382 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 MRE11P49959 708 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 USHBP1Q8N6Y0 703 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 GRPEL1Q9HAV7 217 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 KIAA1211Q6ZU35 1233 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 TTC21BQ7Z4L5 1316 aa13.28□□□□□ -0.28
RFX2-201ENST00000303657 KCNA6P17658 529 aa13.27□□□□□ -0.28
RFX2-201ENST00000303657 KIF16BQ96L93 1317 aa13.27□□□□□ -0.29
RFX2-201ENST00000303657 ANKLE2Q86XL3 938 aa13.27□□□□□ -0.29
RFX2-201ENST00000303657 MBIPQ9NS73 344 aa13.27□□□□□ -0.29
RFX2-201ENST00000303657 TULP4Q9NRJ4 1543 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 ADGRB1O14514 1584 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 FOXO3O43524 673 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 PRR36Q9H6K5 1346 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 EIF4A2Q14240 407 aaKnown RBP13.26□□□□□ -0.29
RFX2-201ENST00000303657 PLEKHF1Q96S99 279 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 TMEM2Q9UHN6 1383 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 A2ML1A8K2U0 1454 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 NRXN1Q9ULB1 1477 aa13.26□□□□□ -0.29
RFX2-201ENST00000303657 R3HCC1Q9Y3T6 440 aaKnown RBP13.25□□□□□ -0.29
RFX2-201ENST00000303657 INSRP06213 1382 aa13.25□□□□□ -0.29
RFX2-201ENST00000303657 PROSER2Q86WR7 435 aaPredicted RBP13.25□□□□□ -0.29
RFX2-201ENST00000303657 KDM2BQ8NHM5 1336 aa13.25□□□□□ -0.29
RFX2-201ENST00000303657 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
RFX2-201ENST00000303657 CHMP5Q9NZZ3 219 aa13.25□□□□□ -0.29
RFX2-201ENST00000303657 QRICH2Q9H0J4 1663 aa13.25□□□□□ -0.29
RFX2-201ENST00000303657 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
RFX2-201ENST00000303657 EIF2S2P20042 333 aaKnown RBP13.24□□□□□ -0.29
RFX2-201ENST00000303657 DNTTIP2Q5QJE6 756 aaKnown RBP13.24□□□□□ -0.29
RFX2-201ENST00000303657 IL13P35225 146 aa13.24□□□□□ -0.29
RFX2-201ENST00000303657 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
RFX2-201ENST00000303657 PIK3C2BO00750 1634 aa13.23□□□□□ -0.29
RFX2-201ENST00000303657 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
RFX2-201ENST00000303657 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
RFX2-201ENST00000303657 C22orf23Q9BZE7 217 aa13.22□□□□□ -0.29
RFX2-201ENST00000303657 ALKQ9UM73 1620 aa13.22□□□□□ -0.29
RFX2-201ENST00000303657 ZFYVE9O95405 1425 aa13.21□□□□□ -0.29
RFX2-201ENST00000303657 GOLGA6L22H0YM25 854 aa13.21□□□□□ -0.29
RFX2-201ENST00000303657 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
RFX2-201ENST00000303657 PTPRMP28827 1452 aa13.2□□□□□ -0.3
RFX2-201ENST00000303657 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
RFX2-201ENST00000303657 PTMAP06454 111 aaKnown RBP13.2□□□□□ -0.3
RFX2-201ENST00000303657 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
RFX2-201ENST00000303657 VAMP4O75379 141 aa13.19□□□□□ -0.3
RFX2-201ENST00000303657 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
RFX2-201ENST00000303657 HSPA2P54652 639 aa13.19□□□□□ -0.3
RFX2-201ENST00000303657 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
RFX2-201ENST00000303657 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
RFX2-201ENST00000303657 F6X3S4 739 aa13.19□□□□□ -0.3
RFX2-201ENST00000303657 API5Q9BZZ5 524 aaKnown RBP13.19□□□□□ -0.3
RFX2-201ENST00000303657 CHMP4BQ9H444 224 aaKnown RBP13.19□□□□□ -0.3
RFX2-201ENST00000303657 SIGLEC1Q9BZZ2 1709 aa13.19□□□□□ -0.3
RFX2-201ENST00000303657 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
RFX2-201ENST00000303657 IFT57Q9NWB7 429 aa13.19□□□□□ -0.3
RFX2-201ENST00000303657 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
RFX2-201ENST00000303657 ZHX1Q9UKY1 873 aaPredicted RBP13.18□□□□□ -0.3
RFX2-201ENST00000303657 DIP2BQ9P265 1576 aa13.18□□□□□ -0.3
RFX2-201ENST00000303657 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
RFX2-201ENST00000303657 CLTCQ00610 1675 aaKnown RBP13.17□□□□□ -0.3
RFX2-201ENST00000303657 PPLO60437 1756 aa13.17□□□□□ -0.3
RFX2-201ENST00000303657 ZC3H6P61129 1189 aaKnown RBP13.17□□□□□ -0.3
RFX2-201ENST00000303657 MPNDQ8N594 471 aa13.17□□□□□ -0.3
RFX2-201ENST00000303657 NASPP49321 788 aaPredicted RBP13.17□□□□□ -0.3
RFX2-201ENST00000303657 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
RFX2-201ENST00000303657 FOXD4L5Q5VV16 416 aaPredicted RBP13.17□□□□□ -0.3
RFX2-201ENST00000303657 FOXD4L4Q8WXT5 416 aaPredicted RBP13.17□□□□□ -0.3
RFX2-201ENST00000303657 KIAA1210Q9ULL0 1709 aa13.17□□□□□ -0.3
RFX2-201ENST00000303657 TPM2P07951 284 aa13.16□□□□□ -0.3
RFX2-201ENST00000303657 ATF3P18847 181 aa13.16□□□□□ -0.3
RFX2-201ENST00000303657 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
RFX2-201ENST00000303657 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
RFX2-201ENST00000303657 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
RFX2-201ENST00000303657 EYA1Q99502 592 aa13.16□□□□□ -0.3
RFX2-201ENST00000303657 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
RFX2-201ENST00000303657 PDCL3Q9H2J4 239 aa13.16□□□□□ -0.3
RFX2-201ENST00000303657 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
RFX2-201ENST00000303657 MYOM1P52179 1685 aa13.16□□□□□ -0.3
RFX2-201ENST00000303657 IL16Q14005 1332 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms