RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 RRP7AQ9Y3A4 280 aaKnown RBP17.11■□□□□ 0.33
CCDC7-202ENST00000302316 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
CCDC7-202ENST00000302316 CDCA7LQ96GN5 454 aa17.11■□□□□ 0.33
CCDC7-202ENST00000302316 HOXC9P31274 260 aa17.1■□□□□ 0.33
CCDC7-202ENST00000302316 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
CCDC7-202ENST00000302316 GCP02774 474 aa17.09■□□□□ 0.33
CCDC7-202ENST00000302316 NEFMP07197 916 aa17.09■□□□□ 0.33
CCDC7-202ENST00000302316 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
CCDC7-202ENST00000302316 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.33
CCDC7-202ENST00000302316 MED1Q15648 1581 aaPredicted RBP17.08■□□□□ 0.33
CCDC7-202ENST00000302316 GOLGA2Q08379 1002 aa17.08■□□□□ 0.33
CCDC7-202ENST00000302316 PHRF1Q9P1Y6 1649 aaKnown RBP17.08■□□□□ 0.32
CCDC7-202ENST00000302316 ZBTB7CA1YPR0 619 aa17.08■□□□□ 0.32
CCDC7-202ENST00000302316 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
CCDC7-202ENST00000302316 NHSL1Q5SYE7 1610 aa17.07■□□□□ 0.32
CCDC7-202ENST00000302316 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
CCDC7-202ENST00000302316 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
CCDC7-202ENST00000302316 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
CCDC7-202ENST00000302316 TMPOP42166 694 aaKnown RBP17.06■□□□□ 0.32
CCDC7-202ENST00000302316 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
CCDC7-202ENST00000302316 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
CCDC7-202ENST00000302316 IP6K1Q92551 441 aa17.06■□□□□ 0.32
CCDC7-202ENST00000302316 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
CCDC7-202ENST00000302316 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
CCDC7-202ENST00000302316 AEBP1Q8IUX7 1158 aa17.05■□□□□ 0.32
CCDC7-202ENST00000302316 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
CCDC7-202ENST00000302316 LTV1Q96GA3 475 aaPredicted RBP17.03■□□□□ 0.32
CCDC7-202ENST00000302316 CRYBG1Q9Y4K1 1723 aa17.03■□□□□ 0.32
CCDC7-202ENST00000302316 NEFLP07196 543 aa17.03■□□□□ 0.32
CCDC7-202ENST00000302316 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
CCDC7-202ENST00000302316 PHACTR3Q96KR7 559 aa17.03■□□□□ 0.32
CCDC7-202ENST00000302316 ROBO1Q9Y6N7 1651 aa17.03■□□□□ 0.32
CCDC7-202ENST00000302316 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
CCDC7-202ENST00000302316 E9PSI1 815 aa17.02■□□□□ 0.32
CCDC7-202ENST00000302316 RIPK4P57078 832 aa17.02■□□□□ 0.32
CCDC7-202ENST00000302316 EYA1Q99502 592 aa17.02■□□□□ 0.32
CCDC7-202ENST00000302316 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.31
CCDC7-202ENST00000302316 CABLES1Q8TDN4 633 aa17.02■□□□□ 0.31
CCDC7-202ENST00000302316 ZC3H6P61129 1189 aaKnown RBP17.01■□□□□ 0.31
CCDC7-202ENST00000302316 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
CCDC7-202ENST00000302316 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
CCDC7-202ENST00000302316 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
CCDC7-202ENST00000302316 KDRP35968 1356 aa17.01■□□□□ 0.31
CCDC7-202ENST00000302316 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
CCDC7-202ENST00000302316 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
CCDC7-202ENST00000302316 AHDC1Q5TGY3 1603 aaPredicted RBP16.98■□□□□ 0.31
CCDC7-202ENST00000302316 RCAN3Q9UKA8 241 aa16.97■□□□□ 0.31
CCDC7-202ENST00000302316 FKBP8Q14318 412 aa16.97■□□□□ 0.31
CCDC7-202ENST00000302316 ABCA3Q99758 1704 aa16.96■□□□□ 0.31
CCDC7-202ENST00000302316 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.3
CCDC7-202ENST00000302316 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.3
CCDC7-202ENST00000302316 ABCC6O95255 1503 aa16.96■□□□□ 0.3
CCDC7-202ENST00000302316 CPDO75976 1380 aa16.95■□□□□ 0.3
CCDC7-202ENST00000302316 KIAA0232Q92628 1395 aa16.95■□□□□ 0.3
CCDC7-202ENST00000302316 HAP1P54257 671 aaPredicted RBP16.95■□□□□ 0.3
CCDC7-202ENST00000302316 LMOD3Q0VAK6 560 aa16.95■□□□□ 0.3
CCDC7-202ENST00000302316 USHBP1Q8N6Y0 703 aa16.95■□□□□ 0.3
CCDC7-202ENST00000302316 DLG5Q8TDM6 1919 aa16.95■□□□□ 0.3
CCDC7-202ENST00000302316 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
CCDC7-202ENST00000302316 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
CCDC7-202ENST00000302316 LRRC59Q96AG4 307 aaKnown RBP16.94■□□□□ 0.3
CCDC7-202ENST00000302316 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
CCDC7-202ENST00000302316 RGPD5Q99666 1765 aa16.94■□□□□ 0.3
CCDC7-202ENST00000302316 ERBB3P21860 1342 aa16.93■□□□□ 0.3
CCDC7-202ENST00000302316 IL16Q14005 1332 aa16.93■□□□□ 0.3
CCDC7-202ENST00000302316 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
CCDC7-202ENST00000302316 COL18A1P39060 1754 aa16.93■□□□□ 0.3
CCDC7-202ENST00000302316 TOM1O60784 492 aa16.93■□□□□ 0.3
CCDC7-202ENST00000302316 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
CCDC7-202ENST00000302316 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
CCDC7-202ENST00000302316 RNF123Q5XPI4 1314 aa16.92■□□□□ 0.3
CCDC7-202ENST00000302316 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
CCDC7-202ENST00000302316 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
CCDC7-202ENST00000302316 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
CCDC7-202ENST00000302316 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
CCDC7-202ENST00000302316 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
CCDC7-202ENST00000302316 THUMPD2Q9BTF0 503 aaKnown RBP16.9■□□□□ 0.3
CCDC7-202ENST00000302316 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
CCDC7-202ENST00000302316 FANCIQ9NVI1 1328 aa16.9■□□□□ 0.3
CCDC7-202ENST00000302316 PIP4K2BP78356 416 aa16.9■□□□□ 0.3
CCDC7-202ENST00000302316 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
CCDC7-202ENST00000302316 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
CCDC7-202ENST00000302316 RRP1P56182 461 aaKnown RBP16.89■□□□□ 0.29
CCDC7-202ENST00000302316 TSR2Q969E8 191 aaKnown RBP16.89■□□□□ 0.29
CCDC7-202ENST00000302316 LMO7Q8WWI1 1683 aa16.88■□□□□ 0.29
CCDC7-202ENST00000302316 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
CCDC7-202ENST00000302316 UBAP1LF5GYI3 381 aa16.88■□□□□ 0.29
CCDC7-202ENST00000302316 CSB-PGBD3P0DP91 1061 aa16.88■□□□□ 0.29
CCDC7-202ENST00000302316 DCTN1Q14203 1278 aa16.88■□□□□ 0.29
CCDC7-202ENST00000302316 COL16A1Q07092 1604 aaPredicted RBP16.87■□□□□ 0.29
CCDC7-202ENST00000302316 COL22A1Q8NFW1 1626 aaPredicted RBP16.87■□□□□ 0.29
CCDC7-202ENST00000302316 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
CCDC7-202ENST00000302316 LAS1LQ9Y4W2 734 aaKnown RBP16.87■□□□□ 0.29
CCDC7-202ENST00000302316 RTF1Q92541 710 aaKnown RBP16.86■□□□□ 0.29
CCDC7-202ENST00000302316 GNAI1P63096 354 aa16.85■□□□□ 0.29
CCDC7-202ENST00000302316 MCM10Q7L590 875 aa16.85■□□□□ 0.29
CCDC7-202ENST00000302316 IFT57Q9NWB7 429 aa16.85■□□□□ 0.29
CCDC7-202ENST00000302316 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
CCDC7-202ENST00000302316 EXOSC9Q06265 439 aaKnown RBP16.84■□□□□ 0.29
CCDC7-202ENST00000302316 GNAT3A8MTJ3 354 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms