RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 IRX3P78415 501 aaPredicted RBP6.05□□□□□ -1.44
ZNF560-201ENST00000301480 MEX3CQ5U5Q3 659 aaKnown RBP6.05□□□□□ -1.44
ZNF560-201ENST00000301480 POTEAQ6S8J7 498 aa6.05□□□□□ -1.44
ZNF560-201ENST00000301480 SPDYE1Q8NFV5 336 aaPredicted RBP6.05□□□□□ -1.44
ZNF560-201ENST00000301480 METP08581 1390 aa6.05□□□□□ -1.44
ZNF560-201ENST00000301480 SOS2Q07890 1332 aaPredicted RBP6.05□□□□□ -1.44
ZNF560-201ENST00000301480 CLCN6P51797 869 aa6.05□□□□□ -1.44
ZNF560-201ENST00000301480 C1orf167Q5SNV9 1468 aa6.05□□□□□ -1.44
ZNF560-201ENST00000301480 CDC42BPGQ6DT37 1551 aa6.05□□□□□ -1.44
ZNF560-201ENST00000301480 ABCC11Q96J66 1382 aa6.05□□□□□ -1.44
ZNF560-201ENST00000301480 PRKAR2AP13861 404 aaKnown RBP6.04□□□□□ -1.44
ZNF560-201ENST00000301480 RXRBP28702 533 aa6.04□□□□□ -1.44
ZNF560-201ENST00000301480 NGLY1Q96IV0 654 aa6.04□□□□□ -1.44
ZNF560-201ENST00000301480 SMARCA5O60264 1052 aaPredicted RBP6.04□□□□□ -1.44
ZNF560-201ENST00000301480 PSEN1P49768 467 aa6.04□□□□□ -1.44
ZNF560-201ENST00000301480 NEUROD2Q15784 382 aa6.04□□□□□ -1.44
ZNF560-201ENST00000301480 MPNDQ8N594 471 aa6.04□□□□□ -1.44
ZNF560-201ENST00000301480 PNPLA6Q8IY17 1366 aa6.04□□□□□ -1.44
ZNF560-201ENST00000301480 NPHP3Q7Z494 1330 aa6.04□□□□□ -1.44
ZNF560-201ENST00000301480 CCDC144AA2RUR9 1427 aa6.03□□□□□ -1.44
ZNF560-201ENST00000301480 GABBR2O75899 941 aa6.03□□□□□ -1.44
ZNF560-201ENST00000301480 RBM6P78332 1123 aaKnown RBP6.03□□□□□ -1.44
ZNF560-201ENST00000301480 SUPT16HQ9Y5B9 1047 aaKnown RBP6.03□□□□□ -1.44
ZNF560-201ENST00000301480 COL22A1Q8NFW1 1626 aaPredicted RBP6.03□□□□□ -1.44
ZNF560-201ENST00000301480 LRP6O75581 1613 aa6.03□□□□□ -1.44
ZNF560-201ENST00000301480 EIF3AQ14152 1382 aaKnown RBP6.03□□□□□ -1.44
ZNF560-201ENST00000301480 SETD1AO15047 1707 aaKnown RBP6.03□□□□□ -1.44
ZNF560-201ENST00000301480 SPATA31E1Q6ZUB1 1445 aa6.03□□□□□ -1.44
ZNF560-201ENST00000301480 SPTY2D1Q68D10 685 aaPredicted RBP6.02□□□□□ -1.44
ZNF560-201ENST00000301480 KNDC1Q76NI1 1749 aa6.02□□□□□ -1.45
ZNF560-201ENST00000301480 FNBP4Q8N3X1 1017 aaPredicted RBP6.02□□□□□ -1.45
ZNF560-201ENST00000301480 TRIM52Q96A61 297 aa6.02□□□□□ -1.45
ZNF560-201ENST00000301480 GZF1Q9H116 711 aaPredicted RBP6.02□□□□□ -1.45
ZNF560-201ENST00000301480 MYOM2P54296 1465 aa6.02□□□□□ -1.45
ZNF560-201ENST00000301480 PPLO60437 1756 aa6.02□□□□□ -1.45
ZNF560-201ENST00000301480 AXDND1Q5T1B0 1012 aaPredicted RBP6.02□□□□□ -1.45
ZNF560-201ENST00000301480 NOL8Q76FK4 1167 aaKnown RBP6.02□□□□□ -1.45
ZNF560-201ENST00000301480 NRXN1Q9ULB1 1477 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 ROBO2Q9HCK4 1378 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 ITGAEP38570 1179 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 SEMA3FQ13275 785 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 NALCNQ8IZF0 1738 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 DLC1Q96QB1 1528 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 PIK3C2GO75747 1445 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 KIF1AQ12756 1690 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 IRF6O14896 467 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 EGFL6Q8IUX8 553 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 CCDC82Q8N4S0 544 aa6.01□□□□□ -1.45
ZNF560-201ENST00000301480 TRPC5Q9UL62 973 aaPredicted RBP6.01□□□□□ -1.45
ZNF560-201ENST00000301480 AFF2P51816 1311 aa6□□□□□ -1.45
ZNF560-201ENST00000301480 ATAD2Q6PL18 1390 aa6□□□□□ -1.45
ZNF560-201ENST00000301480 C11orf95C9JLR9 678 aaPredicted RBP6□□□□□ -1.45
ZNF560-201ENST00000301480 RINLQ6ZS11 566 aa6□□□□□ -1.45
ZNF560-201ENST00000301480 UPF1Q92900 1129 aaKnown RBP eCLIP6□□□□□ -1.45
ZNF560-201ENST00000301480 RBM33Q96EV2 1170 aaKnown RBP6□□□□□ -1.45
ZNF560-201ENST00000301480 MPHOSPH9Q99550 1183 aa6□□□□□ -1.45
ZNF560-201ENST00000301480 ANKARQ7Z5J8 1434 aa6□□□□□ -1.45
ZNF560-201ENST00000301480 DHX57Q6P158 1386 aaKnown RBP6□□□□□ -1.45
ZNF560-201ENST00000301480 PSME1Q06323 249 aa6□□□□□ -1.45
ZNF560-201ENST00000301480 C14orf93Q9H972 538 aaKnown RBP6□□□□□ -1.45
ZNF560-201ENST00000301480 SBNO1A3KN83 1393 aa5.99□□□□□ -1.45
ZNF560-201ENST00000301480 NUTM2DQ5VT03 806 aaPredicted RBP5.99□□□□□ -1.45
ZNF560-201ENST00000301480 EVI5LQ96CN4 794 aa5.99□□□□□ -1.45
ZNF560-201ENST00000301480 CARD10Q9BWT7 1032 aa5.99□□□□□ -1.45
ZNF560-201ENST00000301480 ATRNO75882 1429 aa5.99□□□□□ -1.45
ZNF560-201ENST00000301480 IFT172Q9UG01 1749 aa5.99□□□□□ -1.45
ZNF560-201ENST00000301480 PXDNQ92626 1479 aa5.98□□□□□ -1.45
ZNF560-201ENST00000301480 APBB1IPQ7Z5R6 666 aaPredicted RBP5.98□□□□□ -1.45
ZNF560-201ENST00000301480 QTRT2Q9H974 415 aaKnown RBP5.98□□□□□ -1.45
ZNF560-201ENST00000301480 ARHGEF10O15013 1369 aa5.98□□□□□ -1.45
ZNF560-201ENST00000301480 YTHDC2Q9H6S0 1430 aaKnown RBP5.98□□□□□ -1.45
ZNF560-201ENST00000301480 TTC36A6NLP5 189 aa5.98□□□□□ -1.45
ZNF560-201ENST00000301480 NBPF1Q3BBV0 1214 aa5.98□□□□□ -1.45
ZNF560-201ENST00000301480 RGL3Q3MIN7 710 aa5.98□□□□□ -1.45
ZNF560-201ENST00000301480 NBPF11Q86T75 865 aa5.98□□□□□ -1.45
ZNF560-201ENST00000301480 NME8Q8N427 588 aa5.98□□□□□ -1.45
ZNF560-201ENST00000301480 TSHZ1Q6ZSZ6 1077 aa5.97□□□□□ -1.45
ZNF560-201ENST00000301480 ARMCX6Q7L4S7 300 aa5.97□□□□□ -1.45
ZNF560-201ENST00000301480 SPRYD3Q8NCJ5 442 aa5.97□□□□□ -1.45
ZNF560-201ENST00000301480 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.97□□□□□ -1.45
ZNF560-201ENST00000301480 ADGRB2O60241 1585 aa5.97□□□□□ -1.45
ZNF560-201ENST00000301480 CCDC96Q2M329 555 aa5.97□□□□□ -1.45
ZNF560-201ENST00000301480 GPBP1L1Q9HC44 474 aaPredicted RBP5.97□□□□□ -1.45
ZNF560-201ENST00000301480 ATF5Q9Y2D1 282 aaPredicted RBP5.97□□□□□ -1.45
ZNF560-201ENST00000301480 STK24Q9Y6E0 443 aa5.97□□□□□ -1.45
ZNF560-201ENST00000301480 FANCIQ9NVI1 1328 aa5.97□□□□□ -1.45
ZNF560-201ENST00000301480 NBPF20Q3BBV1 942 aa5.96□□□□□ -1.45
ZNF560-201ENST00000301480 CC2D1BQ5T0F9 858 aaKnown RBP5.96□□□□□ -1.45
ZNF560-201ENST00000301480 TERF2IPQ9NYB0 399 aa5.96□□□□□ -1.45
ZNF560-201ENST00000301480 USP21Q9UK80 565 aa5.96□□□□□ -1.45
ZNF560-201ENST00000301480 SPATA31A3Q5VYP0 1347 aa5.96□□□□□ -1.45
ZNF560-201ENST00000301480 BRD4O60885 1362 aaPredicted RBP5.96□□□□□ -1.45
ZNF560-201ENST00000301480 FMN2Q9NZ56 1722 aa5.96□□□□□ -1.46
ZNF560-201ENST00000301480 NUTM2BA6NNL0 878 aaPredicted RBP5.96□□□□□ -1.46
ZNF560-201ENST00000301480 NUTM2EB1AL46 878 aaPredicted RBP5.96□□□□□ -1.46
ZNF560-201ENST00000301480 MARCH6O60337 910 aa5.96□□□□□ -1.46
ZNF560-201ENST00000301480 NUTM2AQ8IVF1 878 aaPredicted RBP5.96□□□□□ -1.46
ZNF560-201ENST00000301480 C8orf37Q96NL8 207 aa5.96□□□□□ -1.46
ZNF560-201ENST00000301480 CLEC11AQ9Y240 323 aa5.96□□□□□ -1.46
ZNF560-201ENST00000301480 ADGRF5Q8IZF2 1346 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms