RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 ATP2B1P20020 1258 aa15.22■□□□□ 0.03
CLPX-201ENST00000300107 ESCO1Q5FWF5 840 aa15.22■□□□□ 0.03
CLPX-201ENST00000300107 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
CLPX-201ENST00000300107 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
CLPX-201ENST00000300107 ZSCAN31Q96LW9 406 aaPredicted RBP15.22■□□□□ 0.03
CLPX-201ENST00000300107 SLC26A8Q96RN1 970 aa15.22■□□□□ 0.03
CLPX-201ENST00000300107 DNAJC2Q99543 621 aaKnown RBP15.21■□□□□ 0.03
CLPX-201ENST00000300107 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
CLPX-201ENST00000300107 SPATA32Q96LK8 384 aa15.21■□□□□ 0.03
CLPX-201ENST00000300107 HDGFL1Q5TGJ6 251 aa15.21■□□□□ 0.02
CLPX-201ENST00000300107 BLOC1S2Q6QNY1 142 aa15.21■□□□□ 0.02
CLPX-201ENST00000300107 VPS37DQ86XT2 251 aa15.21■□□□□ 0.02
CLPX-201ENST00000300107 TNPO1Q92973 898 aaKnown RBP15.2■□□□□ 0.02
CLPX-201ENST00000300107 STK3Q13188 491 aa15.2■□□□□ 0.02
CLPX-201ENST00000300107 AXDND1Q5T1B0 1012 aaPredicted RBP15.2■□□□□ 0.02
CLPX-201ENST00000300107 SULT6B1Q6IMI4 303 aa15.2■□□□□ 0.02
CLPX-201ENST00000300107 CEP57L1Q8IYX8 460 aa15.2■□□□□ 0.02
CLPX-201ENST00000300107 C9orf84Q5VXU9 1444 aa15.2■□□□□ 0.02
CLPX-201ENST00000300107 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
CLPX-201ENST00000300107 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
CLPX-201ENST00000300107 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
CLPX-201ENST00000300107 POLA1P09884 1462 aaPredicted RBP15.19■□□□□ 0.02
CLPX-201ENST00000300107 SART3Q15020 963 aaKnown RBP15.19■□□□□ 0.02
CLPX-201ENST00000300107 CFAP45Q9UL16 551 aa15.19■□□□□ 0.02
CLPX-201ENST00000300107 DCTN1Q14203 1278 aa15.19■□□□□ 0.02
CLPX-201ENST00000300107 XPCQ01831 940 aaPredicted RBP15.19■□□□□ 0.02
CLPX-201ENST00000300107 MAP3K11Q16584 847 aa15.19■□□□□ 0.02
CLPX-201ENST00000300107 EFCAB5A4FU69 1503 aa15.19■□□□□ 0.02
CLPX-201ENST00000300107 FCHSD2O94868 740 aa15.19■□□□□ 0.02
CLPX-201ENST00000300107 PIP4K2AP48426 406 aaPredicted RBP15.19■□□□□ 0.02
CLPX-201ENST00000300107 BRPF1P55201 1214 aaPredicted RBP15.19■□□□□ 0.02
CLPX-201ENST00000300107 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
CLPX-201ENST00000300107 RDXP35241 583 aaKnown RBP15.18■□□□□ 0.02
CLPX-201ENST00000300107 PDRG1Q9NUG6 133 aa15.18■□□□□ 0.02
CLPX-201ENST00000300107 ERLIN1O75477 346 aa15.18■□□□□ 0.02
CLPX-201ENST00000300107 SSFA2P28290 1259 aa15.18■□□□□ 0.02
CLPX-201ENST00000300107 MEX3CQ5U5Q3 659 aaKnown RBP15.18■□□□□ 0.02
CLPX-201ENST00000300107 AEBP2Q6ZN18 517 aaPredicted RBP15.18■□□□□ 0.02
CLPX-201ENST00000300107 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
CLPX-201ENST00000300107 JAKMIP1Q96N16 626 aaKnown RBP15.18■□□□□ 0.02
CLPX-201ENST00000300107 PLEKHH2Q8IVE3 1493 aa15.18■□□□□ 0.02
CLPX-201ENST00000300107 MRC2Q9UBG0 1479 aa15.18■□□□□ 0.02
CLPX-201ENST00000300107 TSPYL1Q9H0U9 437 aa15.17■□□□□ 0.02
CLPX-201ENST00000300107 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
CLPX-201ENST00000300107 DUSP27Q5VZP5 1158 aa15.17■□□□□ 0.02
CLPX-201ENST00000300107 CABP1Q9NZU7 370 aa15.17■□□□□ 0.02
CLPX-201ENST00000300107 KDM4AO75164 1064 aa15.17■□□□□ 0.02
CLPX-201ENST00000300107 EIF3JO75822 258 aaKnown RBP15.17■□□□□ 0.02
CLPX-201ENST00000300107 PPFIBP1Q86W92 1011 aa15.17■□□□□ 0.02
CLPX-201ENST00000300107 UBXN4Q92575 508 aa15.17■□□□□ 0.02
CLPX-201ENST00000300107 NKTRP30414 1462 aaKnown RBP15.17■□□□□ 0.02
CLPX-201ENST00000300107 RRP12Q5JTH9 1297 aaKnown RBP15.16■□□□□ 0.02
CLPX-201ENST00000300107 FAM177A1Q8N128 213 aaPredicted RBP15.16■□□□□ 0.02
CLPX-201ENST00000300107 UPF3BQ9BZI7 483 aaKnown RBP15.16■□□□□ 0.02
CLPX-201ENST00000300107 NCOA1Q15788 1441 aa15.16■□□□□ 0.02
CLPX-201ENST00000300107 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
CLPX-201ENST00000300107 CBFA2T2O43439 604 aa15.16■□□□□ 0.02
CLPX-201ENST00000300107 MAP4K4O95819 1239 aaPredicted RBP15.16■□□□□ 0.02
CLPX-201ENST00000300107 CCDC191Q8NCU4 936 aa15.16■□□□□ 0.02
CLPX-201ENST00000300107 TBC1D2BQ9UPU7 963 aa15.16■□□□□ 0.02
CLPX-201ENST00000300107 IL1RAPL2Q9NP60 686 aa15.16■□□□□ 0.02
CLPX-201ENST00000300107 DAPK1P53355 1430 aa15.15■□□□□ 0.02
CLPX-201ENST00000300107 KIF2AO00139 706 aaPredicted RBP15.15■□□□□ 0.02
CLPX-201ENST00000300107 RAD21O60216 631 aa15.15■□□□□ 0.02
CLPX-201ENST00000300107 TAF3Q5VWG9 929 aa15.15■□□□□ 0.02
CLPX-201ENST00000300107 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
CLPX-201ENST00000300107 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
CLPX-201ENST00000300107 CCDC183Q5T5S1 534 aa15.15■□□□□ 0.02
CLPX-201ENST00000300107 TBC1D32Q96NH3 1257 aa15.15■□□□□ 0.02
CLPX-201ENST00000300107 DACH1Q9UI36 760 aa15.15■□□□□ 0.02
CLPX-201ENST00000300107 MCM5P33992 734 aa15.14■□□□□ 0.01
CLPX-201ENST00000300107 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
CLPX-201ENST00000300107 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
CLPX-201ENST00000300107 ZNHIT6Q9NWK9 470 aaKnown RBP15.14■□□□□ 0.01
CLPX-201ENST00000300107 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
CLPX-201ENST00000300107 CBX1P83916 185 aa15.14■□□□□ 0.01
CLPX-201ENST00000300107 TXLNAP40222 546 aa15.14■□□□□ 0.01
CLPX-201ENST00000300107 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
CLPX-201ENST00000300107 STRN4Q9NRL3 753 aa15.14■□□□□ 0.01
CLPX-201ENST00000300107 MAGEC2Q9UBF1 373 aaPredicted RBP15.14■□□□□ 0.01
CLPX-201ENST00000300107 EXOC6BQ9Y2D4 811 aa15.14■□□□□ 0.01
CLPX-201ENST00000300107 PTPN14Q15678 1187 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 SKIDA1Q1XH10 827 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 THEMISQ8N1K5 641 aaPredicted RBP15.13■□□□□ 0.01
CLPX-201ENST00000300107 EPS15P42566 896 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 KRT32Q14532 448 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 CDK19Q9BWU1 502 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 GPRASP1Q5JY77 1395 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 CLCN1P35523 988 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 PODXL2Q9NZ53 605 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 FAM177BA6PVY3 158 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 ALDH1L2Q3SY69 923 aa15.13■□□□□ 0.01
CLPX-201ENST00000300107 PLEKHO1Q53GL0 409 aaPredicted RBP15.12■□□□□ 0.01
CLPX-201ENST00000300107 CT47A1Q5JQC4 288 aaPredicted RBP15.12■□□□□ 0.01
CLPX-201ENST00000300107 CC2D2AQ9P2K1 1620 aa15.12■□□□□ 0.01
CLPX-201ENST00000300107 PRDM10Q9NQV6 1147 aa15.12■□□□□ 0.01
CLPX-201ENST00000300107 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
CLPX-201ENST00000300107 USP25Q9UHP3 1055 aa15.12■□□□□ 0.01
CLPX-201ENST00000300107 ERICH4A6NGS2 130 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms