RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 PMM1Q92871 262 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 SH3BP1Q9Y3L3 701 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 SIGLEC1Q9BZZ2 1709 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 ST20-MTHFSA0A0A6YYL1 179 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 TXNDC2Q86VQ3 553 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 AFAP1Q8N556 730 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 JADE2Q9NQC1 790 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 ABCC1P33527 1531 aa11.38□□□□□ -0.59
MMP3-201ENST00000299855 GPATCH8Q9UKJ3 1502 aaKnown RBP11.38□□□□□ -0.59
MMP3-201ENST00000299855 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
MMP3-201ENST00000299855 TSPAN18Q96SJ8 248 aa11.37□□□□□ -0.59
MMP3-201ENST00000299855 HDAC5Q9UQL6 1122 aa11.37□□□□□ -0.59
MMP3-201ENST00000299855 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
MMP3-201ENST00000299855 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
MMP3-201ENST00000299855 PARNO95453 639 aaKnown RBP11.36□□□□□ -0.59
MMP3-201ENST00000299855 SSFA2P28290 1259 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 MLECQ14165 292 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 DCAF11Q8TEB1 546 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 GPATCH3Q96I76 525 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 CCDC85AQ96PX6 553 aaPredicted RBP11.36□□□□□ -0.59
MMP3-201ENST00000299855 STK24Q9Y6E0 443 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 ITSN2Q9NZM3 1697 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 GOLIM4O00461 696 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 PLIN1O60240 522 aa11.36□□□□□ -0.59
MMP3-201ENST00000299855 ZRANB2O95218 330 aaKnown RBP eCLIP11.36□□□□□ -0.59
MMP3-201ENST00000299855 EIF3AQ14152 1382 aaKnown RBP11.36□□□□□ -0.59
MMP3-201ENST00000299855 MLH3Q9UHC1 1453 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.35□□□□□ -0.59
MMP3-201ENST00000299855 USTQ9Y2C2 406 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 COMMD10Q9Y6G5 202 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 U2SURPO15042 1029 aaKnown RBP11.35□□□□□ -0.59
MMP3-201ENST00000299855 SOX12O15370 315 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
MMP3-201ENST00000299855 ZNF280DQ6N043 979 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 DPH6Q7L8W6 267 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 SAMD9LQ8IVG5 1584 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
MMP3-201ENST00000299855 DIP2CQ9Y2E4 1556 aa11.35□□□□□ -0.59
MMP3-201ENST00000299855 KDM5DQ9BY66 1539 aa11.34□□□□□ -0.59
MMP3-201ENST00000299855 ANKRD30AQ9BXX3 1397 aa11.34□□□□□ -0.59
MMP3-201ENST00000299855 EPB41L2O43491 1005 aaKnown RBP11.34□□□□□ -0.59
MMP3-201ENST00000299855 BECN1Q14457 450 aa11.34□□□□□ -0.59
MMP3-201ENST00000299855 CROCC2H7BZ55 1655 aa11.34□□□□□ -0.59
MMP3-201ENST00000299855 FER1L4A9Z1Z3 1794 aa11.34□□□□□ -0.59
MMP3-201ENST00000299855 REREQ9P2R6 1566 aa11.34□□□□□ -0.59
MMP3-201ENST00000299855 SETDB1Q15047 1291 aa11.33□□□□□ -0.6
MMP3-201ENST00000299855 SMYD5Q6GMV2 418 aa11.33□□□□□ -0.6
MMP3-201ENST00000299855 SBNO2Q9Y2G9 1366 aa11.33□□□□□ -0.6
MMP3-201ENST00000299855 LAMC1P11047 1609 aa11.33□□□□□ -0.6
MMP3-201ENST00000299855 POLD1P28340 1107 aa11.33□□□□□ -0.6
MMP3-201ENST00000299855 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
MMP3-201ENST00000299855 ABCA6Q8N139 1617 aa11.32□□□□□ -0.6
MMP3-201ENST00000299855 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
MMP3-201ENST00000299855 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
MMP3-201ENST00000299855 ZNF644Q9H582 1327 aaPredicted RBP11.32□□□□□ -0.6
MMP3-201ENST00000299855 APPP05067 770 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 IGBP1P78318 339 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 NAALADL2Q58DX5 795 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 CADPS2Q86UW7 1296 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 GOPCQ9HD26 462 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 FAN1Q9Y2M0 1017 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 ANKRD50Q9ULJ7 1429 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 CAMSAP2Q08AD1 1489 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 ZMYM3Q14202 1370 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 GPRASP1Q5JY77 1395 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 HSP90AB2PQ58FF8 381 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 DUSP27Q5VZP5 1158 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
MMP3-201ENST00000299855 SYCP2Q9BX26 1530 aa11.31□□□□□ -0.6
MMP3-201ENST00000299855 AGLP35573 1532 aa11.3□□□□□ -0.6
MMP3-201ENST00000299855 HDAC1Q13547 482 aaPredicted RBP11.3□□□□□ -0.6
MMP3-201ENST00000299855 C20orf194Q5TEA3 1177 aa11.3□□□□□ -0.6
MMP3-201ENST00000299855 OTUD6BQ8N6M0 293 aa11.3□□□□□ -0.6
MMP3-201ENST00000299855 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
MMP3-201ENST00000299855 TRPM1Q7Z4N2 1603 aa11.3□□□□□ -0.6
MMP3-201ENST00000299855 hCG_2014768A0A024R1R8 64 aa11.3□□□□□ -0.6
MMP3-201ENST00000299855 CLCN1P35523 988 aa11.3□□□□□ -0.6
MMP3-201ENST00000299855 HNRNPMP52272 730 aaKnown RBP eCLIP11.3□□□□□ -0.6
MMP3-201ENST00000299855 RRP9O43818 475 aaKnown RBP11.29□□□□□ -0.6
MMP3-201ENST00000299855 ZNF16P17020 682 aaPredicted RBP11.29□□□□□ -0.6
MMP3-201ENST00000299855 RHBDL3P58872 404 aa11.29□□□□□ -0.6
MMP3-201ENST00000299855 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
MMP3-201ENST00000299855 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
MMP3-201ENST00000299855 C4orf46Q504U0 113 aa11.29□□□□□ -0.6
MMP3-201ENST00000299855 LARGE2Q8N3Y3 721 aa11.29□□□□□ -0.6
MMP3-201ENST00000299855 FRMD4BQ9Y2L6 1034 aa11.29□□□□□ -0.6
MMP3-201ENST00000299855 TMA7Q9Y2S6 64 aaKnown RBP11.29□□□□□ -0.6
MMP3-201ENST00000299855 KIDINS220Q9ULH0 1771 aa11.29□□□□□ -0.6
MMP3-201ENST00000299855 MAPK8IP3Q9UPT6 1336 aa11.29□□□□□ -0.6
MMP3-201ENST00000299855 NOP9Q86U38 636 aaKnown RBP11.28□□□□□ -0.6
MMP3-201ENST00000299855 SKAP1Q86WV1 359 aa11.28□□□□□ -0.6
MMP3-201ENST00000299855 AMOTL1Q8IY63 956 aa11.28□□□□□ -0.6
MMP3-201ENST00000299855 TRMT2AQ8IZ69 625 aaKnown RBP11.28□□□□□ -0.6
MMP3-201ENST00000299855 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
MMP3-201ENST00000299855 MKL1Q969V6 931 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms