RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 CLIP2Q9UDT6 1046 aa20.3■□□□□ 0.84
TRIM9-201ENST00000298355 SERPINC1P01008 464 aa20.3■□□□□ 0.84
TRIM9-201ENST00000298355 BMP2KLQ5H9B9 411 aa20.3■□□□□ 0.84
TRIM9-201ENST00000298355 CEP57L1Q8IYX8 460 aa20.3■□□□□ 0.84
TRIM9-201ENST00000298355 CEBPZQ03701 1054 aaKnown RBP20.29■□□□□ 0.84
TRIM9-201ENST00000298355 CYP46A1Q9Y6A2 500 aa20.29■□□□□ 0.84
TRIM9-201ENST00000298355 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
TRIM9-201ENST00000298355 CAMK4Q16566 473 aa20.29■□□□□ 0.84
TRIM9-201ENST00000298355 NUTM2DQ5VT03 806 aaPredicted RBP20.29■□□□□ 0.84
TRIM9-201ENST00000298355 PCMTD1Q96MG8 357 aaPredicted RBP20.29■□□□□ 0.84
TRIM9-201ENST00000298355 GIMAP7Q8NHV1 300 aa20.29■□□□□ 0.84
TRIM9-201ENST00000298355 ZNF396Q96N95 335 aaPredicted RBP20.29■□□□□ 0.84
TRIM9-201ENST00000298355 DNMBPQ6XZF7 1577 aa20.28■□□□□ 0.84
TRIM9-201ENST00000298355 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
TRIM9-201ENST00000298355 TWISTNBQ3B726 338 aaPredicted RBP20.28■□□□□ 0.84
TRIM9-201ENST00000298355 NEMFO60524 1076 aa20.28■□□□□ 0.84
TRIM9-201ENST00000298355 TXLNBQ8N3L3 684 aa20.28■□□□□ 0.84
TRIM9-201ENST00000298355 HMOX1P09601 288 aa20.27■□□□□ 0.84
TRIM9-201ENST00000298355 TBC1D9Q6ZT07 1266 aa20.27■□□□□ 0.84
TRIM9-201ENST00000298355 CEP135Q66GS9 1140 aa20.27■□□□□ 0.84
TRIM9-201ENST00000298355 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.84
TRIM9-201ENST00000298355 PLEKHH1Q9ULM0 1364 aa20.27■□□□□ 0.84
TRIM9-201ENST00000298355 TTC12Q9H892 705 aaPredicted RBP20.27■□□□□ 0.84
TRIM9-201ENST00000298355 PEG3Q9GZU2 1588 aa20.27■□□□□ 0.84
TRIM9-201ENST00000298355 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
TRIM9-201ENST00000298355 GDPD2Q9HCC8 539 aa20.26■□□□□ 0.83
TRIM9-201ENST00000298355 GNAI3P08754 354 aa20.26■□□□□ 0.83
TRIM9-201ENST00000298355 ZSCAN31Q96LW9 406 aaPredicted RBP20.26■□□□□ 0.83
TRIM9-201ENST00000298355 UPF3BQ9BZI7 483 aaKnown RBP20.26■□□□□ 0.83
TRIM9-201ENST00000298355 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
TRIM9-201ENST00000298355 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRIM9-201ENST00000298355 PDIA4P13667 645 aaKnown RBP20.25■□□□□ 0.83
TRIM9-201ENST00000298355 TRMT1Q9NXH9 659 aaKnown RBP20.25■□□□□ 0.83
TRIM9-201ENST00000298355 CBFA2T2O43439 604 aa20.25■□□□□ 0.83
TRIM9-201ENST00000298355 SFPQP23246 707 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRIM9-201ENST00000298355 LMOD2Q6P5Q4 547 aa20.25■□□□□ 0.83
TRIM9-201ENST00000298355 COG3Q96JB2 828 aa20.25■□□□□ 0.83
TRIM9-201ENST00000298355 C9orf78Q9NZ63 289 aaPredicted RBP20.25■□□□□ 0.83
TRIM9-201ENST00000298355 EHBP1L1Q8N3D4 1523 aa20.25■□□□□ 0.83
TRIM9-201ENST00000298355 URI1O94763 535 aaPredicted RBP20.24■□□□□ 0.83
TRIM9-201ENST00000298355 TOMM22Q9NS69 142 aa20.24■□□□□ 0.83
TRIM9-201ENST00000298355 MYRIPQ8NFW9 859 aa20.24■□□□□ 0.83
TRIM9-201ENST00000298355 NECTIN2Q92692 538 aa20.23■□□□□ 0.83
TRIM9-201ENST00000298355 SMARCE1Q969G3 411 aa20.23■□□□□ 0.83
TRIM9-201ENST00000298355 PCDHB15Q9Y5E8 787 aa20.23■□□□□ 0.83
TRIM9-201ENST00000298355 UBTFL1P0CB47 393 aaPredicted RBP20.23■□□□□ 0.83
TRIM9-201ENST00000298355 CCDC9Q9Y3X0 531 aaKnown RBP20.23■□□□□ 0.83
TRIM9-201ENST00000298355 LRRCC1Q9C099 1032 aa20.23■□□□□ 0.83
TRIM9-201ENST00000298355 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
TRIM9-201ENST00000298355 ZNF428Q96B54 188 aa20.22■□□□□ 0.83
TRIM9-201ENST00000298355 KDM2BQ8NHM5 1336 aa20.22■□□□□ 0.83
TRIM9-201ENST00000298355 G3BP1Q13283 466 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRIM9-201ENST00000298355 STK38Q15208 465 aa20.22■□□□□ 0.83
TRIM9-201ENST00000298355 ANKRD1Q15327 319 aa20.22■□□□□ 0.83
TRIM9-201ENST00000298355 GBP3Q9H0R5 595 aa20.22■□□□□ 0.83
TRIM9-201ENST00000298355 SURF6O75683 361 aaKnown RBP20.22■□□□□ 0.83
TRIM9-201ENST00000298355 ME1P48163 572 aa20.22■□□□□ 0.83
TRIM9-201ENST00000298355 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
TRIM9-201ENST00000298355 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
TRIM9-201ENST00000298355 CFAP45Q9UL16 551 aa20.21■□□□□ 0.83
TRIM9-201ENST00000298355 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
TRIM9-201ENST00000298355 GNAI2P04899 355 aa20.21■□□□□ 0.83
TRIM9-201ENST00000298355 LMAN1P49257 510 aa20.21■□□□□ 0.83
TRIM9-201ENST00000298355 RPAP2Q8IXW5 612 aaPredicted RBP20.21■□□□□ 0.83
TRIM9-201ENST00000298355 FAM107BQ9H098 131 aa20.21■□□□□ 0.83
TRIM9-201ENST00000298355 TRIM34Q9BYJ4 488 aa20.21■□□□□ 0.83
TRIM9-201ENST00000298355 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
TRIM9-201ENST00000298355 RBSNQ9H1K0 784 aa20.2■□□□□ 0.82
TRIM9-201ENST00000298355 AKAP17AQ02040 695 aaKnown RBP20.2■□□□□ 0.82
TRIM9-201ENST00000298355 VGLL3A8MV65 326 aa20.2■□□□□ 0.82
TRIM9-201ENST00000298355 AMPHP49418 695 aa20.2■□□□□ 0.82
TRIM9-201ENST00000298355 PRKAR2BP31323 418 aa20.2■□□□□ 0.82
TRIM9-201ENST00000298355 FILIP1LQ4L180 1135 aa20.2■□□□□ 0.82
TRIM9-201ENST00000298355 GPRASP1Q5JY77 1395 aa20.2■□□□□ 0.82
TRIM9-201ENST00000298355 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
TRIM9-201ENST00000298355 ZNF397Q8NF99 534 aaPredicted RBP20.19■□□□□ 0.82
TRIM9-201ENST00000298355 SRCIN1Q9C0H9 1055 aa20.19■□□□□ 0.82
TRIM9-201ENST00000298355 TSPYL4Q9UJ04 414 aa20.19■□□□□ 0.82
TRIM9-201ENST00000298355 ZSCAN12O43309 604 aa20.19■□□□□ 0.82
TRIM9-201ENST00000298355 UBE2HP62256 183 aa20.19■□□□□ 0.82
TRIM9-201ENST00000298355 RPRD2Q5VT52 1461 aaKnown RBP20.19■□□□□ 0.82
TRIM9-201ENST00000298355 GAS2L2Q8NHY3 880 aa20.19■□□□□ 0.82
TRIM9-201ENST00000298355 IPO4Q8TEX9 1081 aaKnown RBP20.19■□□□□ 0.82
TRIM9-201ENST00000298355 HDAC1Q13547 482 aaPredicted RBP20.18■□□□□ 0.82
TRIM9-201ENST00000298355 LRRFIP1Q32MZ4 808 aaKnown RBP20.18■□□□□ 0.82
TRIM9-201ENST00000298355 CLASRPQ8N2M8 674 aaKnown RBP20.18■□□□□ 0.82
TRIM9-201ENST00000298355 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
TRIM9-201ENST00000298355 GABPB1Q06547 395 aaPredicted RBP20.18■□□□□ 0.82
TRIM9-201ENST00000298355 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
TRIM9-201ENST00000298355 NAP1L1P55209 391 aaKnown RBP20.18■□□□□ 0.82
TRIM9-201ENST00000298355 SCAND2PQ9GZW5 306 aaPredicted RBP20.18■□□□□ 0.82
TRIM9-201ENST00000298355 CENPHQ9H3R5 247 aa20.18■□□□□ 0.82
TRIM9-201ENST00000298355 SMTNL1A8MU46 457 aa20.18■□□□□ 0.82
TRIM9-201ENST00000298355 EIF2S2P20042 333 aaKnown RBP20.18■□□□□ 0.82
TRIM9-201ENST00000298355 CKAP2LQ8IYA6 745 aa20.18■□□□□ 0.82
TRIM9-201ENST00000298355 MINK1Q8N4C8 1332 aaPredicted RBP20.17■□□□□ 0.82
TRIM9-201ENST00000298355 TRIM27P14373 513 aa20.17■□□□□ 0.82
TRIM9-201ENST00000298355 STK3Q13188 491 aa20.17■□□□□ 0.82
TRIM9-201ENST00000298355 SNW1Q13573 536 aaKnown RBP20.17■□□□□ 0.82
TRIM9-201ENST00000298355 PPFIBP1Q86W92 1011 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms