RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 TXNDC2Q86VQ3 553 aa12.06□□□□□ -0.48
CLRN1-201ENST00000295911 TCP11L2Q8N4U5 519 aa12.06□□□□□ -0.48
CLRN1-201ENST00000295911 CDC42BPGQ6DT37 1551 aa12.06□□□□□ -0.48
CLRN1-201ENST00000295911 ARHGAP23Q9P227 1491 aa12.06□□□□□ -0.48
CLRN1-201ENST00000295911 PPIP5K1Q6PFW1 1433 aa12.06□□□□□ -0.48
CLRN1-201ENST00000295911 ADAMTS13Q76LX8 1427 aa12.06□□□□□ -0.48
CLRN1-201ENST00000295911 DIP2AQ14689 1571 aa12.05□□□□□ -0.48
CLRN1-201ENST00000295911 SEC24BO95487 1268 aa12.05□□□□□ -0.48
CLRN1-201ENST00000295911 U2AF1L5P0DN76 240 aaPredicted RBP12.05□□□□□ -0.48
CLRN1-201ENST00000295911 U2AF1Q01081 240 aaKnown RBP eCLIP12.05□□□□□ -0.48
CLRN1-201ENST00000295911 IER5LQ5T953 404 aa12.05□□□□□ -0.48
CLRN1-201ENST00000295911 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
CLRN1-201ENST00000295911 COL3A1P02461 1466 aaPredicted RBP12.05□□□□□ -0.48
CLRN1-201ENST00000295911 THEMISQ8N1K5 641 aaPredicted RBP12.04□□□□□ -0.48
CLRN1-201ENST00000295911 NUDT16Q96DE0 195 aaKnown RBP12.04□□□□□ -0.48
CLRN1-201ENST00000295911 PNPLA6Q8IY17 1366 aa12.04□□□□□ -0.48
CLRN1-201ENST00000295911 PLIN1O60240 522 aa12.03□□□□□ -0.48
CLRN1-201ENST00000295911 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.03□□□□□ -0.48
CLRN1-201ENST00000295911 TOPAZ1Q8N9V7 1692 aa12.03□□□□□ -0.48
CLRN1-201ENST00000295911 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
CLRN1-201ENST00000295911 CRBNQ96SW2 442 aa12.03□□□□□ -0.48
CLRN1-201ENST00000295911 TBX22Q9Y458 520 aa12.03□□□□□ -0.48
CLRN1-201ENST00000295911 LTKP29376 864 aa12.02□□□□□ -0.49
CLRN1-201ENST00000295911 MYH16Q9H6N6 1097 aa12.02□□□□□ -0.49
CLRN1-201ENST00000295911 FANCIQ9NVI1 1328 aa12.01□□□□□ -0.49
CLRN1-201ENST00000295911 CEBPAP49715 358 aaPredicted RBP12.01□□□□□ -0.49
CLRN1-201ENST00000295911 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
CLRN1-201ENST00000295911 AATKQ6ZMQ8 1374 aa12.01□□□□□ -0.49
CLRN1-201ENST00000295911 ROBO2Q9HCK4 1378 aa12.01□□□□□ -0.49
CLRN1-201ENST00000295911 MAPK8IP3Q9UPT6 1336 aa12□□□□□ -0.49
CLRN1-201ENST00000295911 U2SURPO15042 1029 aaKnown RBP12□□□□□ -0.49
CLRN1-201ENST00000295911 NEUROD2Q15784 382 aa12□□□□□ -0.49
CLRN1-201ENST00000295911 MAMSTRQ6ZN01 415 aa12□□□□□ -0.49
CLRN1-201ENST00000295911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12□□□□□ -0.49
CLRN1-201ENST00000295911 PLEKHF1Q96S99 279 aa12□□□□□ -0.49
CLRN1-201ENST00000295911 RIMS1Q86UR5 1692 aaKnown RBP11.99□□□□□ -0.49
CLRN1-201ENST00000295911 TCERG1O14776 1098 aaKnown RBP11.99□□□□□ -0.49
CLRN1-201ENST00000295911 FCHSD2O94868 740 aa11.99□□□□□ -0.49
CLRN1-201ENST00000295911 NEFMP07197 916 aa11.99□□□□□ -0.49
CLRN1-201ENST00000295911 CT47B1P0C2W7 299 aaPredicted RBP11.99□□□□□ -0.49
CLRN1-201ENST00000295911 PDE3AQ14432 1141 aa11.99□□□□□ -0.49
CLRN1-201ENST00000295911 SETD1BQ9UPS6 1966 aaKnown RBP11.99□□□□□ -0.49
CLRN1-201ENST00000295911 IL16Q14005 1332 aa11.98□□□□□ -0.49
CLRN1-201ENST00000295911 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
CLRN1-201ENST00000295911 COG3Q96JB2 828 aa11.98□□□□□ -0.49
CLRN1-201ENST00000295911 POLKQ9UBT6 870 aa11.98□□□□□ -0.49
CLRN1-201ENST00000295911 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
CLRN1-201ENST00000295911 CDK12Q9NYV4 1490 aaPredicted RBP11.98□□□□□ -0.49
CLRN1-201ENST00000295911 PTCH1Q13635 1447 aa11.98□□□□□ -0.49
CLRN1-201ENST00000295911 NRKQ7Z2Y5 1582 aa11.97□□□□□ -0.49
CLRN1-201ENST00000295911 PLEKHG3A1L390 1219 aa11.97□□□□□ -0.49
CLRN1-201ENST00000295911 MS4A1P11836 297 aa11.97□□□□□ -0.49
CLRN1-201ENST00000295911 AAMPQ13685 434 aa11.97□□□□□ -0.49
CLRN1-201ENST00000295911 C20orf194Q5TEA3 1177 aa11.97□□□□□ -0.49
CLRN1-201ENST00000295911 CEP170BQ9Y4F5 1589 aaPredicted RBP11.97□□□□□ -0.49
CLRN1-201ENST00000295911 PIK3R4Q99570 1358 aa11.96□□□□□ -0.49
CLRN1-201ENST00000295911 XRN1Q8IZH2 1706 aaKnown RBP11.96□□□□□ -0.49
CLRN1-201ENST00000295911 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
CLRN1-201ENST00000295911 CENPQQ7L2Z9 268 aaPredicted RBP11.96□□□□□ -0.49
CLRN1-201ENST00000295911 PTPRUQ92729 1446 aa11.96□□□□□ -0.49
CLRN1-201ENST00000295911 BCAR3O75815 825 aa11.95□□□□□ -0.5
CLRN1-201ENST00000295911 SLC26A8Q96RN1 970 aa11.95□□□□□ -0.5
CLRN1-201ENST00000295911 SCUBE2Q9NQ36 999 aa11.95□□□□□ -0.5
CLRN1-201ENST00000295911 AMOTL2Q9Y2J4 779 aa11.95□□□□□ -0.5
CLRN1-201ENST00000295911 ZNF142P52746 1687 aaPredicted RBP11.95□□□□□ -0.5
CLRN1-201ENST00000295911 PRR36Q9H6K5 1346 aa11.95□□□□□ -0.5
CLRN1-201ENST00000295911 NALCNQ8IZF0 1738 aa11.95□□□□□ -0.5
CLRN1-201ENST00000295911 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
CLRN1-201ENST00000295911 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
CLRN1-201ENST00000295911 NME9Q86XW9 330 aa11.94□□□□□ -0.5
CLRN1-201ENST00000295911 PPM1GO15355 546 aaPredicted RBP11.94□□□□□ -0.5
CLRN1-201ENST00000295911 PSEN1P49768 467 aa11.94□□□□□ -0.5
CLRN1-201ENST00000295911 RARSP54136 660 aaKnown RBP11.94□□□□□ -0.5
CLRN1-201ENST00000295911 CHD2O14647 1828 aaKnown RBP11.93□□□□□ -0.5
CLRN1-201ENST00000295911 LRRC7Q96NW7 1537 aa11.93□□□□□ -0.5
CLRN1-201ENST00000295911 DLG5Q8TDM6 1919 aa11.93□□□□□ -0.5
CLRN1-201ENST00000295911 PLCG2P16885 1265 aa11.93□□□□□ -0.5
CLRN1-201ENST00000295911 RIPK4P57078 832 aa11.93□□□□□ -0.5
CLRN1-201ENST00000295911 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
CLRN1-201ENST00000295911 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
CLRN1-201ENST00000295911 ADAMTSL3P82987 1691 aa11.93□□□□□ -0.5
CLRN1-201ENST00000295911 ACEP12821 1306 aa11.92□□□□□ -0.5
CLRN1-201ENST00000295911 TTC21BQ7Z4L5 1316 aa11.92□□□□□ -0.5
CLRN1-201ENST00000295911 KDM2BQ8NHM5 1336 aa11.92□□□□□ -0.5
CLRN1-201ENST00000295911 USP6P35125 1406 aa11.92□□□□□ -0.5
CLRN1-201ENST00000295911 IL13P35225 146 aa11.92□□□□□ -0.5
CLRN1-201ENST00000295911 TTC21AQ8NDW8 1320 aa11.92□□□□□ -0.5
CLRN1-201ENST00000295911 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
CLRN1-201ENST00000295911 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.5
CLRN1-201ENST00000295911 FMN2Q9NZ56 1722 aa11.9□□□□□ -0.5
CLRN1-201ENST00000295911 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
CLRN1-201ENST00000295911 NFE2L2Q16236 605 aa11.9□□□□□ -0.5
CLRN1-201ENST00000295911 OCEL1Q9H607 264 aa11.9□□□□□ -0.5
CLRN1-201ENST00000295911 EMILIN1Q9Y6C2 1016 aa11.9□□□□□ -0.5
CLRN1-201ENST00000295911 LMOD3Q0VAK6 560 aa11.89□□□□□ -0.51
CLRN1-201ENST00000295911 ANKLE2Q86XL3 938 aa11.89□□□□□ -0.51
CLRN1-201ENST00000295911 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
CLRN1-201ENST00000295911 OVOS2A0A0J9YW53 1432 aa11.89□□□□□ -0.51
CLRN1-201ENST00000295911 OVOS2Q6IE36 1432 aa11.89□□□□□ -0.51
CLRN1-201ENST00000295911 SSH2Q76I76 1423 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms