RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 TWISTNBQ3B726 338 aaPredicted RBP24.55■■□□□ 1.52
NKX6-1-201ENST00000295886 GNAI1P63096 354 aa24.55■■□□□ 1.52
NKX6-1-201ENST00000295886 SIRT2Q8IXJ6 389 aa24.55■■□□□ 1.52
NKX6-1-201ENST00000295886 NUDT16Q96DE0 195 aaKnown RBP24.55■■□□□ 1.52
NKX6-1-201ENST00000295886 TSPOAP1O95153 1857 aa24.54■■□□□ 1.52
NKX6-1-201ENST00000295886 HSCBQ8IWL3 235 aa24.53■■□□□ 1.52
NKX6-1-201ENST00000295886 IFT57Q9NWB7 429 aa24.53■■□□□ 1.52
NKX6-1-201ENST00000295886 EIF5BO60841 1220 aaKnown RBP24.53■■□□□ 1.52
NKX6-1-201ENST00000295886 COG3Q96JB2 828 aa24.53■■□□□ 1.52
NKX6-1-201ENST00000295886 NUTM2FA1L443 756 aa24.52■■□□□ 1.52
NKX6-1-201ENST00000295886 MCM4P33991 863 aa24.52■■□□□ 1.52
NKX6-1-201ENST00000295886 CPSF1Q10570 1443 aaKnown RBP24.52■■□□□ 1.51
NKX6-1-201ENST00000295886 EDC4Q6P2E9 1401 aaKnown RBP24.52■■□□□ 1.51
NKX6-1-201ENST00000295886 ZNF853P0CG23 659 aa24.51■■□□□ 1.51
NKX6-1-201ENST00000295886 CHMP5Q9NZZ3 219 aa24.51■■□□□ 1.51
NKX6-1-201ENST00000295886 CPS1P31327 1500 aa24.51■■□□□ 1.51
NKX6-1-201ENST00000295886 BRPF1P55201 1214 aaPredicted RBP24.5■■□□□ 1.51
NKX6-1-201ENST00000295886 KRT24Q2M2I5 525 aa24.5■■□□□ 1.51
NKX6-1-201ENST00000295886 AEBP1Q8IUX7 1158 aa24.5■■□□□ 1.51
NKX6-1-201ENST00000295886 CALD1Q05682 793 aaKnown RBP24.5■■□□□ 1.51
NKX6-1-201ENST00000295886 ZNF428Q96B54 188 aa24.5■■□□□ 1.51
NKX6-1-201ENST00000295886 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
NKX6-1-201ENST00000295886 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
NKX6-1-201ENST00000295886 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
NKX6-1-201ENST00000295886 DLC1Q96QB1 1528 aa24.49■■□□□ 1.51
NKX6-1-201ENST00000295886 CFAP44Q96MT7 982 aa24.48■■□□□ 1.51
NKX6-1-201ENST00000295886 CCDC61Q9Y6R9 512 aa24.48■■□□□ 1.51
NKX6-1-201ENST00000295886 PTCH1Q13635 1447 aa24.48■■□□□ 1.51
NKX6-1-201ENST00000295886 BMP2KLQ5H9B9 411 aa24.48■■□□□ 1.51
NKX6-1-201ENST00000295886 SOX12O15370 315 aa24.47■■□□□ 1.51
NKX6-1-201ENST00000295886 ARHGAP45Q92619 1136 aa24.47■■□□□ 1.51
NKX6-1-201ENST00000295886 FOXD4L1Q9NU39 408 aa24.47■■□□□ 1.51
NKX6-1-201ENST00000295886 ABCC4O15439 1325 aa24.47■■□□□ 1.51
NKX6-1-201ENST00000295886 SETD1AO15047 1707 aaKnown RBP24.47■■□□□ 1.51
NKX6-1-201ENST00000295886 RBM25P49756 843 aaKnown RBP24.47■■□□□ 1.51
NKX6-1-201ENST00000295886 GCC1Q96CN9 775 aa24.46■■□□□ 1.51
NKX6-1-201ENST00000295886 CDK12Q9NYV4 1490 aaPredicted RBP24.46■■□□□ 1.51
NKX6-1-201ENST00000295886 PRR36Q9H6K5 1346 aa24.45■■□□□ 1.51
NKX6-1-201ENST00000295886 ZNF692Q9BU19 519 aaPredicted RBP24.45■■□□□ 1.5
NKX6-1-201ENST00000295886 CD2BP2O95400 341 aaKnown RBP24.45■■□□□ 1.5
NKX6-1-201ENST00000295886 TBC1D9Q6ZT07 1266 aa24.45■■□□□ 1.5
NKX6-1-201ENST00000295886 RBM42Q9BTD8 480 aaKnown RBP24.45■■□□□ 1.5
NKX6-1-201ENST00000295886 PIK3R4Q99570 1358 aa24.44■■□□□ 1.5
NKX6-1-201ENST00000295886 SULT6B1Q6IMI4 303 aa24.44■■□□□ 1.5
NKX6-1-201ENST00000295886 KIF2CQ99661 725 aa24.43■■□□□ 1.5
NKX6-1-201ENST00000295886 MCM10Q7L590 875 aa24.42■■□□□ 1.5
NKX6-1-201ENST00000295886 SPATA31D1Q6ZQQ2 1576 aa24.42■■□□□ 1.5
NKX6-1-201ENST00000295886 NRXN3Q9Y4C0 1643 aa24.42■■□□□ 1.5
NKX6-1-201ENST00000295886 AATKQ6ZMQ8 1374 aa24.42■■□□□ 1.5
NKX6-1-201ENST00000295886 DLG5Q8TDM6 1919 aa24.41■■□□□ 1.5
NKX6-1-201ENST00000295886 TRAK2O60296 914 aa24.41■■□□□ 1.5
NKX6-1-201ENST00000295886 HSP90AB1P08238 724 aaKnown RBP24.41■■□□□ 1.5
NKX6-1-201ENST00000295886 LMOD3Q0VAK6 560 aa24.41■■□□□ 1.5
NKX6-1-201ENST00000295886 FAM43AQ8N2R8 423 aa24.41■■□□□ 1.5
NKX6-1-201ENST00000295886 EIF4A2Q14240 407 aaKnown RBP24.4■■□□□ 1.5
NKX6-1-201ENST00000295886 C16orf71Q8IYS4 520 aaPredicted RBP24.4■■□□□ 1.5
NKX6-1-201ENST00000295886 ESF1Q9H501 851 aaKnown RBP24.4■■□□□ 1.5
NKX6-1-201ENST00000295886 APBB1O00213 710 aa24.39■■□□□ 1.5
NKX6-1-201ENST00000295886 API5Q9BZZ5 524 aaKnown RBP24.39■■□□□ 1.5
NKX6-1-201ENST00000295886 CHMP4BQ9H444 224 aaKnown RBP24.39■■□□□ 1.49
NKX6-1-201ENST00000295886 PANK2Q9BZ23 570 aa24.38■■□□□ 1.49
NKX6-1-201ENST00000295886 PPP6R1Q9UPN7 881 aa24.38■■□□□ 1.49
NKX6-1-201ENST00000295886 GSPT1P15170 499 aaKnown RBP24.38■■□□□ 1.49
NKX6-1-201ENST00000295886 DIP2BQ9P265 1576 aa24.37■■□□□ 1.49
NKX6-1-201ENST00000295886 XRCC6P12956 609 aaKnown RBP eCLIP24.37■■□□□ 1.49
NKX6-1-201ENST00000295886 L1TD1Q5T7N2 865 aaKnown RBP24.37■■□□□ 1.49
NKX6-1-201ENST00000295886 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.37■■□□□ 1.49
NKX6-1-201ENST00000295886 GOLGA6L3A6NEY3 463 aa24.36■■□□□ 1.49
NKX6-1-201ENST00000295886 HSP90AB2PQ58FF8 381 aa24.36■■□□□ 1.49
NKX6-1-201ENST00000295886 SNX21Q969T3 373 aa24.36■■□□□ 1.49
NKX6-1-201ENST00000295886 MIS18AQ9NYP9 233 aa24.36■■□□□ 1.49
NKX6-1-201ENST00000295886 DDIT3P35638 169 aa24.36■■□□□ 1.49
NKX6-1-201ENST00000295886 UBE2Q2Q8WVN8 375 aa24.36■■□□□ 1.49
NKX6-1-201ENST00000295886 AGLP35573 1532 aa24.36■■□□□ 1.49
NKX6-1-201ENST00000295886 HSP90AA1P07900 732 aaKnown RBP24.35■■□□□ 1.49
NKX6-1-201ENST00000295886 OTUD7AQ8TE49 926 aaPredicted RBP24.35■■□□□ 1.49
NKX6-1-201ENST00000295886 TNPO1Q92973 898 aaKnown RBP24.35■■□□□ 1.49
NKX6-1-201ENST00000295886 ROBO2Q9HCK4 1378 aa24.35■■□□□ 1.49
NKX6-1-201ENST00000295886 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
NKX6-1-201ENST00000295886 PLEKHM2Q8IWE5 1019 aa24.33■■□□□ 1.49
NKX6-1-201ENST00000295886 ACEP12821 1306 aa24.33■■□□□ 1.48
NKX6-1-201ENST00000295886 KNDC1Q76NI1 1749 aa24.33■■□□□ 1.48
NKX6-1-201ENST00000295886 TTC21BQ7Z4L5 1316 aa24.32■■□□□ 1.48
NKX6-1-201ENST00000295886 SMARCA5O60264 1052 aaPredicted RBP24.32■■□□□ 1.48
NKX6-1-201ENST00000295886 CDC45O75419 566 aa24.31■■□□□ 1.48
NKX6-1-201ENST00000295886 MON2Q7Z3U7 1717 aa24.31■■□□□ 1.48
NKX6-1-201ENST00000295886 FSD2A1L4K1 749 aa24.31■■□□□ 1.48
NKX6-1-201ENST00000295886 FOXO3O43524 673 aa24.31■■□□□ 1.48
NKX6-1-201ENST00000295886 DCTPP1Q9H773 170 aa24.3■■□□□ 1.48
NKX6-1-201ENST00000295886 REREQ9P2R6 1566 aa24.29■■□□□ 1.48
NKX6-1-201ENST00000295886 C3P01024 1663 aa24.29■■□□□ 1.48
NKX6-1-201ENST00000295886 MEIS3Q99687 375 aa24.29■■□□□ 1.48
NKX6-1-201ENST00000295886 RRAGDQ9NQL2 400 aaPredicted RBP24.29■■□□□ 1.48
NKX6-1-201ENST00000295886 INTS3Q68E01 1043 aaKnown RBP24.29■■□□□ 1.48
NKX6-1-201ENST00000295886 GAS2L2Q8NHY3 880 aa24.29■■□□□ 1.48
NKX6-1-201ENST00000295886 DDX11L8A8MPP1 907 aa24.28■■□□□ 1.48
NKX6-1-201ENST00000295886 K7ELQ4 463 aaPredicted RBP24.28■■□□□ 1.48
NKX6-1-201ENST00000295886 CHL1O00533 1208 aa24.28■■□□□ 1.48
NKX6-1-201ENST00000295886 MSH6P52701 1360 aa24.28■■□□□ 1.48
NKX6-1-201ENST00000295886 RGS12O14924 1447 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms