RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
KCNIP3-201ENST00000295225 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
KCNIP3-201ENST00000295225 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
KCNIP3-201ENST00000295225 HSP90AA2PQ14568 343 aaPredicted RBP16.62■□□□□ 0.25
KCNIP3-201ENST00000295225 ABCC11Q96J66 1382 aa16.62■□□□□ 0.25
KCNIP3-201ENST00000295225 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
KCNIP3-201ENST00000295225 MYO3AQ8NEV4 1616 aa16.62■□□□□ 0.25
KCNIP3-201ENST00000295225 PRDM10Q9NQV6 1147 aa16.62■□□□□ 0.25
KCNIP3-201ENST00000295225 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
KCNIP3-201ENST00000295225 TSPOAP1O95153 1857 aa16.61■□□□□ 0.25
KCNIP3-201ENST00000295225 DIP2CQ9Y2E4 1556 aa16.61■□□□□ 0.25
KCNIP3-201ENST00000295225 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
KCNIP3-201ENST00000295225 ZC3H13Q5T200 1668 aaKnown RBP16.6■□□□□ 0.25
KCNIP3-201ENST00000295225 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
KCNIP3-201ENST00000295225 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
KCNIP3-201ENST00000295225 ARHGEF28Q8N1W1 1705 aaKnown RBP16.6■□□□□ 0.25
KCNIP3-201ENST00000295225 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
KCNIP3-201ENST00000295225 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
KCNIP3-201ENST00000295225 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
KCNIP3-201ENST00000295225 NEXMIFQ5QGS0 1516 aa16.59■□□□□ 0.25
KCNIP3-201ENST00000295225 CHD1LQ86WJ1 897 aa16.59■□□□□ 0.25
KCNIP3-201ENST00000295225 SIRT2Q8IXJ6 389 aa16.59■□□□□ 0.25
KCNIP3-201ENST00000295225 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
KCNIP3-201ENST00000295225 CFAP74Q9C0B2 1584 aa16.58■□□□□ 0.25
KCNIP3-201ENST00000295225 CD163L1Q9NR16 1453 aa16.58■□□□□ 0.25
KCNIP3-201ENST00000295225 MCM4P33991 863 aa16.58■□□□□ 0.24
KCNIP3-201ENST00000295225 RRAGDQ9NQL2 400 aaPredicted RBP16.58■□□□□ 0.24
KCNIP3-201ENST00000295225 NEURL4Q96JN8 1562 aa16.58■□□□□ 0.24
KCNIP3-201ENST00000295225 SMC5Q8IY18 1101 aa16.58■□□□□ 0.24
KCNIP3-201ENST00000295225 NEO1Q92859 1461 aa16.58■□□□□ 0.24
KCNIP3-201ENST00000295225 VIRMAQ69YN4 1812 aaKnown RBP16.57■□□□□ 0.24
KCNIP3-201ENST00000295225 VAMP4O75379 141 aa16.57■□□□□ 0.24
KCNIP3-201ENST00000295225 HDAC1Q13547 482 aaPredicted RBP16.57■□□□□ 0.24
KCNIP3-201ENST00000295225 YTHDC2Q9H6S0 1430 aaKnown RBP16.57■□□□□ 0.24
KCNIP3-201ENST00000295225 XRCC6P12956 609 aaKnown RBP eCLIP16.56■□□□□ 0.24
KCNIP3-201ENST00000295225 OTUD7AQ8TE49 926 aaPredicted RBP16.56■□□□□ 0.24
KCNIP3-201ENST00000295225 HSCBQ8IWL3 235 aa16.56■□□□□ 0.24
KCNIP3-201ENST00000295225 NUCB1Q02818 461 aa16.56■□□□□ 0.24
KCNIP3-201ENST00000295225 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
KCNIP3-201ENST00000295225 SMARCA5O60264 1052 aaPredicted RBP16.55■□□□□ 0.24
KCNIP3-201ENST00000295225 HSP90AA1P07900 732 aaKnown RBP16.55■□□□□ 0.24
KCNIP3-201ENST00000295225 MCM10Q7L590 875 aa16.55■□□□□ 0.24
KCNIP3-201ENST00000295225 PRDM4Q9UKN5 801 aa16.55■□□□□ 0.24
KCNIP3-201ENST00000295225 TRAK2O60296 914 aa16.55■□□□□ 0.24
KCNIP3-201ENST00000295225 PIK3C2BO00750 1634 aa16.54■□□□□ 0.24
KCNIP3-201ENST00000295225 ZNF592Q92610 1267 aa16.54■□□□□ 0.24
KCNIP3-201ENST00000295225 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
KCNIP3-201ENST00000295225 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
KCNIP3-201ENST00000295225 HSP90AB1P08238 724 aaKnown RBP16.54■□□□□ 0.24
KCNIP3-201ENST00000295225 TWISTNBQ3B726 338 aaPredicted RBP16.54■□□□□ 0.24
KCNIP3-201ENST00000295225 PTPRMP28827 1452 aa16.54■□□□□ 0.24
KCNIP3-201ENST00000295225 CHAMP1Q96JM3 812 aa16.53■□□□□ 0.24
KCNIP3-201ENST00000295225 PUS7Q96PZ0 661 aaKnown RBP16.53■□□□□ 0.24
KCNIP3-201ENST00000295225 CLSTN1O94985 981 aa16.53■□□□□ 0.24
KCNIP3-201ENST00000295225 MRPL50Q8N5N7 158 aaKnown RBP16.53■□□□□ 0.24
KCNIP3-201ENST00000295225 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
KCNIP3-201ENST00000295225 FCHSD2O94868 740 aa16.52■□□□□ 0.24
KCNIP3-201ENST00000295225 NECTIN2Q92692 538 aa16.52■□□□□ 0.24
KCNIP3-201ENST00000295225 KIF16BQ96L93 1317 aa16.52■□□□□ 0.24
KCNIP3-201ENST00000295225 TBC1D9Q6ZT07 1266 aa16.52■□□□□ 0.24
KCNIP3-201ENST00000295225 NFE2L2Q16236 605 aa16.52■□□□□ 0.23
KCNIP3-201ENST00000295225 RICTORQ6R327 1708 aa16.52■□□□□ 0.23
KCNIP3-201ENST00000295225 LRRC7Q96NW7 1537 aa16.51■□□□□ 0.23
KCNIP3-201ENST00000295225 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
KCNIP3-201ENST00000295225 KCNG1Q9UIX4 513 aa16.51■□□□□ 0.23
KCNIP3-201ENST00000295225 NSD2O96028 1365 aa16.51■□□□□ 0.23
KCNIP3-201ENST00000295225 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
KCNIP3-201ENST00000295225 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
KCNIP3-201ENST00000295225 ADGRB2O60241 1585 aa16.5■□□□□ 0.23
KCNIP3-201ENST00000295225 GOLGA6L3A6NEY3 463 aa16.5■□□□□ 0.23
KCNIP3-201ENST00000295225 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
KCNIP3-201ENST00000295225 KIF2CQ99661 725 aa16.5■□□□□ 0.23
KCNIP3-201ENST00000295225 FOXO3O43524 673 aa16.49■□□□□ 0.23
KCNIP3-201ENST00000295225 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
KCNIP3-201ENST00000295225 IL13P35225 146 aa16.49■□□□□ 0.23
KCNIP3-201ENST00000295225 FOXD4L5Q5VV16 416 aaPredicted RBP16.49■□□□□ 0.23
KCNIP3-201ENST00000295225 FOXD4L4Q8WXT5 416 aaPredicted RBP16.49■□□□□ 0.23
KCNIP3-201ENST00000295225 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
KCNIP3-201ENST00000295225 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
KCNIP3-201ENST00000295225 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
KCNIP3-201ENST00000295225 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
KCNIP3-201ENST00000295225 NUDT16Q96DE0 195 aaKnown RBP16.48■□□□□ 0.23
KCNIP3-201ENST00000295225 AK9Q5TCS8 1911 aa16.48■□□□□ 0.23
KCNIP3-201ENST00000295225 F6X3S4 739 aa16.47■□□□□ 0.23
KCNIP3-201ENST00000295225 GAS2L3Q86XJ1 694 aa16.47■□□□□ 0.23
KCNIP3-201ENST00000295225 GAS2L2Q8NHY3 880 aa16.47■□□□□ 0.23
KCNIP3-201ENST00000295225 SSFA2P28290 1259 aa16.46■□□□□ 0.23
KCNIP3-201ENST00000295225 HSP90AB2PQ58FF8 381 aa16.46■□□□□ 0.23
KCNIP3-201ENST00000295225 ARHGAP31Q2M1Z3 1444 aa16.46■□□□□ 0.23
KCNIP3-201ENST00000295225 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.23
KCNIP3-201ENST00000295225 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
KCNIP3-201ENST00000295225 METP08581 1390 aa16.46■□□□□ 0.23
KCNIP3-201ENST00000295225 PREX1Q8TCU6 1659 aa16.46■□□□□ 0.23
KCNIP3-201ENST00000295225 PKP1Q13835 747 aa16.46■□□□□ 0.22
KCNIP3-201ENST00000295225 COG3Q96JB2 828 aa16.46■□□□□ 0.22
KCNIP3-201ENST00000295225 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
KCNIP3-201ENST00000295225 MAP2P11137 1827 aaKnown RBP16.45■□□□□ 0.22
KCNIP3-201ENST00000295225 TMEM131LA2VDJ0 1609 aa16.45■□□□□ 0.22
KCNIP3-201ENST00000295225 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
KCNIP3-201ENST00000295225 PNPLA6Q8IY17 1366 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms