RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZC3H6P61129 1189 aaKnown RBP14.91□□□□□ -0.02
SYNGAP1-201ENST00000293748 ARHGEF28Q8N1W1 1705 aaKnown RBP14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 ATP7BP35670 1465 aa14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 RCAN3Q9UKA8 241 aa14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 SETD1AO15047 1707 aaKnown RBP14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 STRCP1A6NGW2 1772 aa14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 ROBO1Q9Y6N7 1651 aa14.9□□□□□ -0.02
SYNGAP1-201ENST00000293748 USP35Q9P2H5 1018 aa14.89□□□□□ -0.03
SYNGAP1-201ENST00000293748 EDC4Q6P2E9 1401 aaKnown RBP14.89□□□□□ -0.03
SYNGAP1-201ENST00000293748 MCCP23508 829 aa14.89□□□□□ -0.03
SYNGAP1-201ENST00000293748 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
SYNGAP1-201ENST00000293748 STRN4Q9NRL3 753 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 USP21Q9UK80 565 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 PNPLA6Q8IY17 1366 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 CABLES1Q8TDN4 633 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 KIF7Q2M1P5 1343 aa14.88□□□□□ -0.03
SYNGAP1-201ENST00000293748 USP6P35125 1406 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 KIAA2012Q0VF49 1180 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 TRPC5Q9UL62 973 aaPredicted RBP14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 PHLPP1O60346 1717 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 FGD1P98174 961 aa14.87□□□□□ -0.03
SYNGAP1-201ENST00000293748 CCDC7Q96M83 1385 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 FMN2Q9NZ56 1722 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 GCP02774 474 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 ITSN1Q15811 1721 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 KCNJ4P48050 445 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 NME9Q86XW9 330 aa14.86□□□□□ -0.03
SYNGAP1-201ENST00000293748 SMG6Q86US8 1419 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 NSD3Q9BZ95 1437 aa14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 GOLGA6L3A6NEY3 463 aa14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 A0A1W2PP64 1363 aa14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 AHDC1Q5TGY3 1603 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-201ENST00000293748 TOM1L2Q6ZVM7 507 aa14.84□□□□□ -0.03
SYNGAP1-201ENST00000293748 U2SURPO15042 1029 aaKnown RBP14.84□□□□□ -0.03
SYNGAP1-201ENST00000293748 NSD2O96028 1365 aa14.84□□□□□ -0.03
SYNGAP1-201ENST00000293748 RALBP1Q15311 655 aa14.83□□□□□ -0.03
SYNGAP1-201ENST00000293748 SPRYD3Q8NCJ5 442 aa14.83□□□□□ -0.03
SYNGAP1-201ENST00000293748 AFF2P51816 1311 aa14.83□□□□□ -0.03
SYNGAP1-201ENST00000293748 SLKQ9H2G2 1235 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 RWDD1Q9H446 243 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 RXRBP28702 533 aa14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 NLRP2Q9NX02 1062 aa14.83□□□□□ -0.04
SYNGAP1-201ENST00000293748 IPO8O15397 1037 aaKnown RBP14.82□□□□□ -0.04
SYNGAP1-201ENST00000293748 QTRT2Q9H974 415 aaKnown RBP14.82□□□□□ -0.04
SYNGAP1-201ENST00000293748 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 BTG4Q9NY30 223 aa14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 DRC7Q8IY82 874 aa14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 CHRNA2Q15822 529 aa14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 GZF1Q9H116 711 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-201ENST00000293748 SYAP1Q96A49 352 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-201ENST00000293748 PDE3BQ13370 1112 aa14.8□□□□□ -0.04
SYNGAP1-201ENST00000293748 UNC5CLQ8IV45 518 aa14.8□□□□□ -0.04
SYNGAP1-201ENST00000293748 SF3B2Q13435 895 aaKnown RBP14.79□□□□□ -0.04
SYNGAP1-201ENST00000293748 RSPH6AQ9H0K4 717 aa14.79□□□□□ -0.04
SYNGAP1-201ENST00000293748 RBM6P78332 1123 aaKnown RBP14.78□□□□□ -0.04
SYNGAP1-201ENST00000293748 WASHC2AQ641Q2 1341 aa14.78□□□□□ -0.04
SYNGAP1-201ENST00000293748 RAPGEF4Q8WZA2 1011 aa14.77□□□□□ -0.04
SYNGAP1-201ENST00000293748 PXDNQ92626 1479 aa14.77□□□□□ -0.05
SYNGAP1-201ENST00000293748 CDCA7Q9BWT1 371 aaPredicted RBP14.76□□□□□ -0.05
SYNGAP1-201ENST00000293748 FANCIQ9NVI1 1328 aa14.76□□□□□ -0.05
SYNGAP1-201ENST00000293748 KIAA0232Q92628 1395 aa14.76□□□□□ -0.05
SYNGAP1-201ENST00000293748 FYB1O15117 783 aa14.76□□□□□ -0.05
SYNGAP1-201ENST00000293748 CPSF1Q10570 1443 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-201ENST00000293748 XIRP1Q702N8 1843 aaKnown RBP14.74□□□□□ -0.05
SYNGAP1-201ENST00000293748 USP31Q70CQ4 1352 aa14.74□□□□□ -0.05
SYNGAP1-201ENST00000293748 HSP90AA2PQ14568 343 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 C11orf95C9JLR9 678 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 CALD1Q05682 793 aaKnown RBP14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 USP19O94966 1318 aa14.73□□□□□ -0.05
SYNGAP1-201ENST00000293748 TATP17735 454 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 ANKRD24Q8TF21 1146 aa14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 HTATSF1O43719 755 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 IP6K1Q92551 441 aa14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 RRS1Q15050 365 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-201ENST00000293748 ARHGEF25Q86VW2 580 aa14.71□□□□□ -0.05
SYNGAP1-201ENST00000293748 NHSL1Q5SYE7 1610 aa14.71□□□□□ -0.05
SYNGAP1-201ENST00000293748 KIAA1211Q6ZU35 1233 aa14.71□□□□□ -0.05
SYNGAP1-201ENST00000293748 TCP11L2Q8N4U5 519 aa14.71□□□□□ -0.05
SYNGAP1-201ENST00000293748 FAM83GA6ND36 823 aa14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 GSE1Q14687 1217 aa14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 VPS72Q15906 364 aa14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 COL16A1Q07092 1604 aaPredicted RBP14.71□□□□□ -0.06
SYNGAP1-201ENST00000293748 FLT4P35916 1363 aa14.7□□□□□ -0.06
SYNGAP1-201ENST00000293748 AATKQ6ZMQ8 1374 aa14.7□□□□□ -0.06
SYNGAP1-201ENST00000293748 GOLGA2Q08379 1002 aa14.7□□□□□ -0.06
SYNGAP1-201ENST00000293748 GJD4Q96KN9 370 aaPredicted RBP14.7□□□□□ -0.06
SYNGAP1-201ENST00000293748 EXOC5O00471 708 aa14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 DIAPH1O60610 1272 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 THRAP3Q9Y2W1 955 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 DDX11L8A8MPP1 907 aa14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 FNBP4Q8N3X1 1017 aaPredicted RBP14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 CPDO75976 1380 aa14.69□□□□□ -0.06
SYNGAP1-201ENST00000293748 MFAP1P55081 439 aaKnown RBP14.68□□□□□ -0.06
SYNGAP1-201ENST00000293748 CARD14Q9BXL6 1004 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms