RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 NUCB1Q02818 461 aa12.43□□□□□ -0.42
HMGCR-201ENST00000287936 GAS2L2Q8NHY3 880 aa12.43□□□□□ -0.42
HMGCR-201ENST00000287936 ZBTB40Q9NUA8 1239 aa12.43□□□□□ -0.42
HMGCR-201ENST00000287936 ZC3H13Q5T200 1668 aaKnown RBP12.43□□□□□ -0.42
HMGCR-201ENST00000287936 MED14O60244 1454 aa12.43□□□□□ -0.42
HMGCR-201ENST00000287936 NCLP19338 710 aaKnown RBP12.42□□□□□ -0.42
HMGCR-201ENST00000287936 ATP7BP35670 1465 aa12.42□□□□□ -0.42
HMGCR-201ENST00000287936 REC8O95072 547 aa12.42□□□□□ -0.42
HMGCR-201ENST00000287936 MBIPQ9NS73 344 aa12.42□□□□□ -0.42
HMGCR-201ENST00000287936 USP32Q8NFA0 1604 aa12.42□□□□□ -0.42
HMGCR-201ENST00000287936 TNRQ92752 1358 aa12.42□□□□□ -0.42
HMGCR-201ENST00000287936 IQSEC2Q5JU85 1478 aa12.42□□□□□ -0.42
HMGCR-201ENST00000287936 BMP2KLQ5H9B9 411 aa12.42□□□□□ -0.42
HMGCR-201ENST00000287936 MRPL50Q8N5N7 158 aaKnown RBP12.42□□□□□ -0.42
HMGCR-201ENST00000287936 RPAP2Q8IXW5 612 aaPredicted RBP12.41□□□□□ -0.42
HMGCR-201ENST00000287936 SEC24BO95487 1268 aa12.41□□□□□ -0.42
HMGCR-201ENST00000287936 CIZ1Q9ULV3 898 aaPredicted RBP12.41□□□□□ -0.42
HMGCR-201ENST00000287936 FRMPD1Q5SYB0 1578 aa12.41□□□□□ -0.42
HMGCR-201ENST00000287936 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
HMGCR-201ENST00000287936 VAMP4O75379 141 aa12.4□□□□□ -0.42
HMGCR-201ENST00000287936 SIRT1Q96EB6 747 aa12.4□□□□□ -0.43
HMGCR-201ENST00000287936 MCM4P33991 863 aa12.39□□□□□ -0.43
HMGCR-201ENST00000287936 IFT172Q9UG01 1749 aa12.39□□□□□ -0.43
HMGCR-201ENST00000287936 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
HMGCR-201ENST00000287936 FBLN1P23142 703 aa12.38□□□□□ -0.43
HMGCR-201ENST00000287936 IL13P35225 146 aa12.38□□□□□ -0.43
HMGCR-201ENST00000287936 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
HMGCR-201ENST00000287936 RABEP1Q15276 862 aa12.38□□□□□ -0.43
HMGCR-201ENST00000287936 OS9Q13438 667 aaPredicted RBP12.38□□□□□ -0.43
HMGCR-201ENST00000287936 PHACTR3Q96KR7 559 aa12.38□□□□□ -0.43
HMGCR-201ENST00000287936 HDAC5Q9UQL6 1122 aa12.38□□□□□ -0.43
HMGCR-201ENST00000287936 TRAK2O60296 914 aa12.38□□□□□ -0.43
HMGCR-201ENST00000287936 BRPF3Q9ULD4 1205 aa12.38□□□□□ -0.43
HMGCR-201ENST00000287936 PTPRCP08575 1304 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 GNAI3P08754 354 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 PIK3C2BO00750 1634 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 NLRP6P59044 892 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 CCDC30Q5VVM6 783 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
HMGCR-201ENST00000287936 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
HMGCR-201ENST00000287936 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 AATKQ6ZMQ8 1374 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
HMGCR-201ENST00000287936 ALKQ9UM73 1620 aa12.37□□□□□ -0.43
HMGCR-201ENST00000287936 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
HMGCR-201ENST00000287936 K7ELQ4 463 aaPredicted RBP12.36□□□□□ -0.43
HMGCR-201ENST00000287936 NUCB2P80303 420 aa12.36□□□□□ -0.43
HMGCR-201ENST00000287936 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
HMGCR-201ENST00000287936 ACEP12821 1306 aa12.36□□□□□ -0.43
HMGCR-201ENST00000287936 ISY1Q9ULR0 285 aaKnown RBP12.36□□□□□ -0.43
HMGCR-201ENST00000287936 PTPRMP28827 1452 aa12.36□□□□□ -0.43
HMGCR-201ENST00000287936 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
HMGCR-201ENST00000287936 SLC26A8Q96RN1 970 aa12.35□□□□□ -0.43
HMGCR-201ENST00000287936 ZBTB7BO15156 539 aaPredicted RBP12.35□□□□□ -0.43
HMGCR-201ENST00000287936 GNAI2P04899 355 aa12.35□□□□□ -0.43
HMGCR-201ENST00000287936 MRE11P49959 708 aa12.35□□□□□ -0.43
HMGCR-201ENST00000287936 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
HMGCR-201ENST00000287936 ARHGEF28Q8N1W1 1705 aaKnown RBP12.34□□□□□ -0.43
HMGCR-201ENST00000287936 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
HMGCR-201ENST00000287936 MCM10Q7L590 875 aa12.34□□□□□ -0.43
HMGCR-201ENST00000287936 TSPYL6Q8N831 410 aa12.34□□□□□ -0.43
HMGCR-201ENST00000287936 C8orf58Q8NAV2 365 aa12.34□□□□□ -0.43
HMGCR-201ENST00000287936 FAM83GA6ND36 823 aa12.34□□□□□ -0.43
HMGCR-201ENST00000287936 SNX21Q969T3 373 aa12.34□□□□□ -0.43
HMGCR-201ENST00000287936 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
HMGCR-201ENST00000287936 EIF4A2Q14240 407 aaKnown RBP12.33□□□□□ -0.43
HMGCR-201ENST00000287936 KIAA1211Q6ZU35 1233 aa12.33□□□□□ -0.43
HMGCR-201ENST00000287936 DLC1Q96QB1 1528 aa12.33□□□□□ -0.44
HMGCR-201ENST00000287936 A2ML1A8K2U0 1454 aa12.33□□□□□ -0.44
HMGCR-201ENST00000287936 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
HMGCR-201ENST00000287936 KIF24Q5T7B8 1368 aa12.33□□□□□ -0.44
HMGCR-201ENST00000287936 DDX49Q9Y6V7 483 aaKnown RBP12.33□□□□□ -0.44
HMGCR-201ENST00000287936 TBC1D9Q6ZT07 1266 aa12.32□□□□□ -0.44
HMGCR-201ENST00000287936 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
HMGCR-201ENST00000287936 ARHGEF40Q8TER5 1519 aa12.32□□□□□ -0.44
HMGCR-201ENST00000287936 AMOTL2Q9Y2J4 779 aa12.32□□□□□ -0.44
HMGCR-201ENST00000287936 PREX1Q8TCU6 1659 aa12.31□□□□□ -0.44
HMGCR-201ENST00000287936 FAM43AQ8N2R8 423 aa12.31□□□□□ -0.44
HMGCR-201ENST00000287936 RILPL2Q969X0 211 aa12.31□□□□□ -0.44
HMGCR-201ENST00000287936 RBM25P49756 843 aaKnown RBP12.31□□□□□ -0.44
HMGCR-201ENST00000287936 TEFQ10587 303 aa12.31□□□□□ -0.44
HMGCR-201ENST00000287936 ANKRD44Q8N8A2 993 aa12.31□□□□□ -0.44
HMGCR-201ENST00000287936 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
HMGCR-201ENST00000287936 ABCC4O15439 1325 aa12.31□□□□□ -0.44
HMGCR-201ENST00000287936 USP19O94966 1318 aa12.31□□□□□ -0.44
HMGCR-201ENST00000287936 ERC2O15083 957 aa12.3□□□□□ -0.44
HMGCR-201ENST00000287936 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
HMGCR-201ENST00000287936 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
HMGCR-201ENST00000287936 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
HMGCR-201ENST00000287936 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
HMGCR-201ENST00000287936 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
HMGCR-201ENST00000287936 NAP1L5Q96NT1 182 aaPredicted RBP12.3□□□□□ -0.44
HMGCR-201ENST00000287936 DCTPP1Q9H773 170 aa12.3□□□□□ -0.44
HMGCR-201ENST00000287936 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
HMGCR-201ENST00000287936 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 GNAT3A8MTJ3 354 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms