RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 DENND4BO75064 1496 aaPredicted RBP4.1□□□□□ -1.75
HERC4-201ENST00000277817 NRAPQ86VF7 1730 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 DKK1O94907 266 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 SUGT1Q9Y2Z0 365 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 AKNAQ7Z591 1439 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 SPTLC1O15269 473 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 SSFA2P28290 1259 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 EGFLAMQ63HQ2 1017 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 SETBP1Q9Y6X0 1596 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 SMARCA5O60264 1052 aaPredicted RBP4.09□□□□□ -1.75
HERC4-201ENST00000277817 GMLQ99445 158 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 CUEDC1Q9NWM3 386 aaPredicted RBP4.09□□□□□ -1.75
HERC4-201ENST00000277817 CASKIN1Q8WXD9 1431 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 EHBP1L1Q8N3D4 1523 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 NWD2Q9ULI1 1742 aa4.09□□□□□ -1.75
HERC4-201ENST00000277817 NLRP1Q9C000 1473 aa4.09□□□□□ -1.76
HERC4-201ENST00000277817 SOWAHDA6NJG2 315 aa4.09□□□□□ -1.76
HERC4-201ENST00000277817 CLCN1P35523 988 aa4.09□□□□□ -1.76
HERC4-201ENST00000277817 COL19A1Q14993 1142 aa4.09□□□□□ -1.76
HERC4-201ENST00000277817 ZNF662Q6ZS27 426 aa4.09□□□□□ -1.76
HERC4-201ENST00000277817 L3MBTL3Q96JM7 780 aaPredicted RBP4.09□□□□□ -1.76
HERC4-201ENST00000277817 ADGRL2O95490 1459 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 ZC3H6P61129 1189 aaKnown RBP4.08□□□□□ -1.76
HERC4-201ENST00000277817 RBM46Q8TBY0 533 aaKnown RBP4.08□□□□□ -1.76
HERC4-201ENST00000277817 KIF12Q96FN5 646 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 GPATCH3Q96I76 525 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 CDC42BPGQ6DT37 1551 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 YEATS2Q9ULM3 1422 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 DIEXFQ68CQ4 756 aaKnown RBP4.08□□□□□ -1.76
HERC4-201ENST00000277817 C1orf216Q8TAB5 229 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 SLC39A13Q96H72 371 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 BRINP2Q9C0B6 783 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 TBC1D2BQ9UPU7 963 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 PLCH1Q4KWH8 1693 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 ABCC6O95255 1503 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 MST1RQ04912 1400 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 PALM3A6NDB9 673 aaPredicted RBP4.08□□□□□ -1.76
HERC4-201ENST00000277817 CLK2P49760 499 aaKnown RBP4.08□□□□□ -1.76
HERC4-201ENST00000277817 METTL16Q86W50 562 aaKnown RBP4.08□□□□□ -1.76
HERC4-201ENST00000277817 SLC43A3Q8NBI5 491 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 HIRIP3Q9BW71 556 aaPredicted RBP4.08□□□□□ -1.76
HERC4-201ENST00000277817 FGD6Q6ZV73 1430 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 KIAA1210Q9ULL0 1709 aa4.08□□□□□ -1.76
HERC4-201ENST00000277817 ADGRB3O60242 1522 aa4.07□□□□□ -1.76
HERC4-201ENST00000277817 BRPF3Q9ULD4 1205 aa4.07□□□□□ -1.76
HERC4-201ENST00000277817 ARHGAP35Q9NRY4 1499 aa4.07□□□□□ -1.76
HERC4-201ENST00000277817 ARMC5Q96C12 935 aa4.07□□□□□ -1.76
HERC4-201ENST00000277817 TINF2Q9BSI4 451 aa4.07□□□□□ -1.76
HERC4-201ENST00000277817 TBX22Q9Y458 520 aa4.07□□□□□ -1.76
HERC4-201ENST00000277817 AKT1S1Q96B36 256 aa4.07□□□□□ -1.76
HERC4-201ENST00000277817 CALR3Q96L12 384 aaKnown RBP4.07□□□□□ -1.76
HERC4-201ENST00000277817 BEGAINQ9BUH8 593 aa4.07□□□□□ -1.76
HERC4-201ENST00000277817 MAFBQ9Y5Q3 323 aaPredicted RBP4.07□□□□□ -1.76
HERC4-201ENST00000277817 NKTRP30414 1462 aaKnown RBP4.06□□□□□ -1.76
HERC4-201ENST00000277817 USP32Q8NFA0 1604 aa4.06□□□□□ -1.76
HERC4-201ENST00000277817 NEFLP07196 543 aa4.06□□□□□ -1.76
HERC4-201ENST00000277817 PRDM16Q9HAZ2 1276 aa4.06□□□□□ -1.76
HERC4-201ENST00000277817 TNS1Q9HBL0 1735 aaKnown RBP4.06□□□□□ -1.76
HERC4-201ENST00000277817 MYO5BQ9ULV0 1848 aa4.06□□□□□ -1.76
HERC4-201ENST00000277817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.06□□□□□ -1.76
HERC4-201ENST00000277817 CDCA7Q9BWT1 371 aaPredicted RBP4.06□□□□□ -1.76
HERC4-201ENST00000277817 LRRC9Q6ZRR7 1453 aa4.06□□□□□ -1.76
HERC4-201ENST00000277817 ADGRB2O60241 1585 aa4.06□□□□□ -1.76
HERC4-201ENST00000277817 PSME1Q06323 249 aa4.06□□□□□ -1.76
HERC4-201ENST00000277817 SPDYE1Q8NFV5 336 aaPredicted RBP4.06□□□□□ -1.76
HERC4-201ENST00000277817 KIF1AQ12756 1690 aa4.06□□□□□ -1.76
HERC4-201ENST00000277817 TROQ12816 1431 aaPredicted RBP4.05□□□□□ -1.76
HERC4-201ENST00000277817 RBL2Q08999 1139 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 HDGFL1Q5TGJ6 251 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 RIPOR2Q9Y4F9 1068 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 NEXMIFQ5QGS0 1516 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 ANKRD13AQ8IZ07 590 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 CABP2Q9NPB3 220 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 CEP162Q5TB80 1403 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 TOPAZ1Q8N9V7 1692 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 NOP9Q86U38 636 aaKnown RBP4.05□□□□□ -1.76
HERC4-201ENST00000277817 METTL3Q86U44 580 aaKnown RBP4.05□□□□□ -1.76
HERC4-201ENST00000277817 LOC102724159A0A0B4J2E5 919 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 PWP2Q15269 919 aaKnown RBP4.05□□□□□ -1.76
HERC4-201ENST00000277817 TSR1Q2NL82 804 aaKnown RBP4.05□□□□□ -1.76
HERC4-201ENST00000277817 POTEHQ6S545 545 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 NLGN1Q8N2Q7 840 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 PXYLP1Q8TE99 480 aa4.05□□□□□ -1.76
HERC4-201ENST00000277817 PPLO60437 1756 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 TRAPPC8Q9Y2L5 1435 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 RPRD2Q5VT52 1461 aaKnown RBP4.04□□□□□ -1.76
HERC4-201ENST00000277817 PPP1R3GB7ZBB8 358 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 RSBN1LQ6PCB5 846 aaPredicted RBP4.04□□□□□ -1.76
HERC4-201ENST00000277817 CHIC2Q9UKJ5 165 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 ZNF831Q5JPB2 1677 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 TRPM3Q9HCF6 1732 aaPredicted RBP4.04□□□□□ -1.76
HERC4-201ENST00000277817 PLEKHD1A6NEE1 506 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 CNGB1Q14028 1251 aaPredicted RBP4.04□□□□□ -1.76
HERC4-201ENST00000277817 PRR7Q8TB68 274 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 CHMP7Q8WUX9 453 aaPredicted RBP4.04□□□□□ -1.76
HERC4-201ENST00000277817 IGHA2P01877 340 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 CYB5RLQ6IPT4 315 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 SPIRE2Q8WWL2 714 aa4.04□□□□□ -1.76
HERC4-201ENST00000277817 PHRF1Q9P1Y6 1649 aaKnown RBP4.04□□□□□ -1.76
HERC4-201ENST00000277817 SYCP2Q9BX26 1530 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms