RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 MROH1Q8NDA8 1641 aa11.27□□□□□ -0.61
SEC16A-201ENST00000277537 CT47B1P0C2W7 299 aaPredicted RBP11.27□□□□□ -0.61
SEC16A-201ENST00000277537 CCDC27Q2M243 656 aa11.27□□□□□ -0.61
SEC16A-201ENST00000277537 GLI2P10070 1586 aa11.26□□□□□ -0.61
SEC16A-201ENST00000277537 MAP3K19Q56UN5 1328 aa11.26□□□□□ -0.61
SEC16A-201ENST00000277537 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
SEC16A-201ENST00000277537 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
SEC16A-201ENST00000277537 DEPDC5O75140 1603 aa11.26□□□□□ -0.61
SEC16A-201ENST00000277537 IL13P35225 146 aa11.25□□□□□ -0.61
SEC16A-201ENST00000277537 RAPGEF4Q8WZA2 1011 aa11.25□□□□□ -0.61
SEC16A-201ENST00000277537 ZNF521Q96K83 1311 aa11.25□□□□□ -0.61
SEC16A-201ENST00000277537 ZNF530Q6P9A1 599 aaPredicted RBP11.25□□□□□ -0.61
SEC16A-201ENST00000277537 IFT57Q9NWB7 429 aa11.25□□□□□ -0.61
SEC16A-201ENST00000277537 ZFYVE9O95405 1425 aa11.25□□□□□ -0.61
SEC16A-201ENST00000277537 DIP2BQ9P265 1576 aa11.25□□□□□ -0.61
SEC16A-201ENST00000277537 C8orf58Q8NAV2 365 aa11.25□□□□□ -0.61
SEC16A-201ENST00000277537 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
SEC16A-201ENST00000277537 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
SEC16A-201ENST00000277537 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
SEC16A-201ENST00000277537 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
SEC16A-201ENST00000277537 HMMRO75330 724 aa11.24□□□□□ -0.61
SEC16A-201ENST00000277537 MROH2AA6NES4 1674 aa11.23□□□□□ -0.61
SEC16A-201ENST00000277537 NEXMIFQ5QGS0 1516 aa11.23□□□□□ -0.61
SEC16A-201ENST00000277537 ALKQ9UM73 1620 aa11.23□□□□□ -0.61
SEC16A-201ENST00000277537 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
SEC16A-201ENST00000277537 AIMP1Q12904 312 aaKnown RBP11.23□□□□□ -0.61
SEC16A-201ENST00000277537 GNAT3A8MTJ3 354 aa11.22□□□□□ -0.61
SEC16A-201ENST00000277537 F6X3S4 739 aa11.22□□□□□ -0.61
SEC16A-201ENST00000277537 EVA1CP58658 441 aa11.22□□□□□ -0.61
SEC16A-201ENST00000277537 EYA1Q99502 592 aa11.22□□□□□ -0.61
SEC16A-201ENST00000277537 LAMC1P11047 1609 aa11.22□□□□□ -0.61
SEC16A-201ENST00000277537 CLTCQ00610 1675 aaKnown RBP11.22□□□□□ -0.61
SEC16A-201ENST00000277537 MTHFSDQ2M296 383 aaKnown RBP11.22□□□□□ -0.61
SEC16A-201ENST00000277537 HDGFL1Q5TGJ6 251 aa11.22□□□□□ -0.61
SEC16A-201ENST00000277537 KRT28Q7Z3Y7 464 aa11.22□□□□□ -0.61
SEC16A-201ENST00000277537 AAMPQ13685 434 aa11.21□□□□□ -0.61
SEC16A-201ENST00000277537 PLEKHO1Q53GL0 409 aaPredicted RBP11.21□□□□□ -0.61
SEC16A-201ENST00000277537 MPRIPQ6WCQ1 1025 aa11.21□□□□□ -0.61
SEC16A-201ENST00000277537 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
SEC16A-201ENST00000277537 TTC21AQ8NDW8 1320 aa11.21□□□□□ -0.61
SEC16A-201ENST00000277537 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
SEC16A-201ENST00000277537 TRIM6-TRIM34B2RNG4 842 aa11.21□□□□□ -0.61
SEC16A-201ENST00000277537 LRRC59Q96AG4 307 aaKnown RBP11.21□□□□□ -0.61
SEC16A-201ENST00000277537 TULP4Q9NRJ4 1543 aa11.21□□□□□ -0.62
SEC16A-201ENST00000277537 INSRP06213 1382 aa11.21□□□□□ -0.62
SEC16A-201ENST00000277537 HSP90AB1P08238 724 aaKnown RBP11.21□□□□□ -0.62
SEC16A-201ENST00000277537 PIK3C2BO00750 1634 aa11.21□□□□□ -0.62
SEC16A-201ENST00000277537 QRICH2Q9H0J4 1663 aa11.21□□□□□ -0.62
SEC16A-201ENST00000277537 ALDH1L2Q3SY69 923 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 TRMT2AQ8IZ69 625 aaKnown RBP11.2□□□□□ -0.62
SEC16A-201ENST00000277537 KCNH5Q8NCM2 988 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 IL16Q14005 1332 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 IQGAP1P46940 1657 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 CCDC30Q5VVM6 783 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 CABLES1Q8TDN4 633 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 STRN4Q9NRL3 753 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 FOXD4L1Q9NU39 408 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 VAMP4O75379 141 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 HSCBQ8IWL3 235 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 PLEKHG1Q9ULL1 1385 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 NRXN1Q9ULB1 1477 aa11.2□□□□□ -0.62
SEC16A-201ENST00000277537 CHRNA2Q15822 529 aa11.19□□□□□ -0.62
SEC16A-201ENST00000277537 DDX17Q92841 729 aaKnown RBP11.19□□□□□ -0.62
SEC16A-201ENST00000277537 ADGRB1O14514 1584 aa11.19□□□□□ -0.62
SEC16A-201ENST00000277537 SETBP1Q9Y6X0 1596 aa11.19□□□□□ -0.62
SEC16A-201ENST00000277537 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
SEC16A-201ENST00000277537 TTC5Q8N0Z6 440 aa11.18□□□□□ -0.62
SEC16A-201ENST00000277537 C9orf78Q9NZ63 289 aaPredicted RBP11.18□□□□□ -0.62
SEC16A-201ENST00000277537 CHMP3Q9Y3E7 222 aa11.18□□□□□ -0.62
SEC16A-201ENST00000277537 PTPRMP28827 1452 aa11.18□□□□□ -0.62
SEC16A-201ENST00000277537 RILPL2Q969X0 211 aa11.18□□□□□ -0.62
SEC16A-201ENST00000277537 FLT4P35916 1363 aa11.17□□□□□ -0.62
SEC16A-201ENST00000277537 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
SEC16A-201ENST00000277537 HOXC9P31274 260 aa11.17□□□□□ -0.62
SEC16A-201ENST00000277537 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
SEC16A-201ENST00000277537 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
SEC16A-201ENST00000277537 ANXA1P04083 346 aa11.17□□□□□ -0.62
SEC16A-201ENST00000277537 TAF7Q15545 349 aaPredicted RBP11.16□□□□□ -0.62
SEC16A-201ENST00000277537 CHMP4AQ9BY43 222 aa11.16□□□□□ -0.62
SEC16A-201ENST00000277537 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
SEC16A-201ENST00000277537 GCP02774 474 aa11.16□□□□□ -0.62
SEC16A-201ENST00000277537 CHD1LQ86WJ1 897 aa11.16□□□□□ -0.62
SEC16A-201ENST00000277537 RICTORQ6R327 1708 aa11.16□□□□□ -0.62
SEC16A-201ENST00000277537 UBTFL1P0CB47 393 aaPredicted RBP11.16□□□□□ -0.62
SEC16A-201ENST00000277537 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
SEC16A-201ENST00000277537 MRPL50Q8N5N7 158 aaKnown RBP11.16□□□□□ -0.62
SEC16A-201ENST00000277537 DDX54Q8TDD1 881 aaKnown RBP11.16□□□□□ -0.62
SEC16A-201ENST00000277537 ANKRD24Q8TF21 1146 aa11.16□□□□□ -0.62
SEC16A-201ENST00000277537 SYTL4Q96C24 671 aaPredicted RBP11.16□□□□□ -0.62
SEC16A-201ENST00000277537 PREX1Q8TCU6 1659 aa11.15□□□□□ -0.62
SEC16A-201ENST00000277537 TATP17735 454 aaPredicted RBP11.15□□□□□ -0.62
SEC16A-201ENST00000277537 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
SEC16A-201ENST00000277537 C22orf23Q9BZE7 217 aa11.15□□□□□ -0.63
SEC16A-201ENST00000277537 C19orf44Q9H6X5 657 aa11.15□□□□□ -0.63
SEC16A-201ENST00000277537 AGLP35573 1532 aa11.14□□□□□ -0.63
SEC16A-201ENST00000277537 SMARCA5O60264 1052 aaPredicted RBP11.14□□□□□ -0.63
SEC16A-201ENST00000277537 MYL6BP14649 208 aa11.14□□□□□ -0.63
SEC16A-201ENST00000277537 NOL8Q76FK4 1167 aaKnown RBP11.14□□□□□ -0.63
SEC16A-201ENST00000277537 KCNJ4P48050 445 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms