RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ATP2B1P20020 1258 aa10.26□□□□□ -0.77
SCUBE3-201ENST00000274938 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.26□□□□□ -0.77
SCUBE3-201ENST00000274938 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
SCUBE3-201ENST00000274938 ERICH4A6NGS2 130 aa10.26□□□□□ -0.77
SCUBE3-201ENST00000274938 FAM193AP78312 1265 aa10.26□□□□□ -0.77
SCUBE3-201ENST00000274938 LARP1BQ659C4 914 aaKnown RBP10.26□□□□□ -0.77
SCUBE3-201ENST00000274938 GAS2L2Q8NHY3 880 aa10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 TANGO6Q9C0B7 1094 aa10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 PDS5BQ9NTI5 1447 aa10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 DESP17661 470 aa10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 IMMTQ16891 758 aaKnown RBP10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 RAPGEF4Q8WZA2 1011 aa10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 LRRFIP2Q9Y608 721 aaKnown RBP10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 CCT4P50991 539 aaKnown RBP10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 KRT32Q14532 448 aa10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 PTPN14Q15678 1187 aa10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 DNAJC2Q99543 621 aaKnown RBP10.25□□□□□ -0.77
SCUBE3-201ENST00000274938 NEMFO60524 1076 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 NACAP1Q9BZK3 213 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 BMP2KQ9NSY1 1161 aaPredicted RBP10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 CCDC158Q5M9N0 1113 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 KIF18AQ8NI77 898 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 WASF1Q92558 559 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 MAP2K1Q02750 393 aaPredicted RBP10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 CEBPZQ03701 1054 aaKnown RBP10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 GOLGA6L10A0A0M3HER8 536 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 FYB1O15117 783 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 MCM5P33992 734 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 ZSCAN25Q6NSZ9 544 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 KIAA1328Q86T90 577 aa10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 ZNF397Q8NF99 534 aaPredicted RBP10.24□□□□□ -0.77
SCUBE3-201ENST00000274938 CETN2P41208 172 aa10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 SFPQP23246 707 aaKnown RBP eCLIP10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 PAF1Q8N7H5 531 aa10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 IKQ13123 557 aaPredicted RBP10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 SMC1AQ14683 1233 aaKnown RBP10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 ADAMTS8Q9UP79 889 aa10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 RBM25P49756 843 aaKnown RBP10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 CCDC83Q8IWF9 413 aa10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 GNL3LQ9NVN8 582 aaKnown RBP10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 PDRG1Q9NUG6 133 aa10.23□□□□□ -0.77
SCUBE3-201ENST00000274938 CCDC69A6NI79 296 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 CTNNA3Q9UI47 895 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 KIF5CO60282 957 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 SOGA3Q5TF21 947 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 BLOC1S2Q6QNY1 142 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 CEP131Q9UPN4 1083 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 ABCC8Q09428 1581 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 TWISTNBQ3B726 338 aaPredicted RBP10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 TTC39AQ5SRH9 613 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 MYOM3Q5VTT5 1437 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 STAMBPO95630 424 aa10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 EIF5P55010 431 aaKnown RBP10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 EXOSC9Q06265 439 aaKnown RBP10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 MEX3CQ5U5Q3 659 aaKnown RBP10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 SMG6Q86US8 1419 aaKnown RBP10.22□□□□□ -0.77
SCUBE3-201ENST00000274938 RRBP1Q9P2E9 1410 aaKnown RBP10.21□□□□□ -0.77
SCUBE3-201ENST00000274938 MSH5O43196 834 aa10.21□□□□□ -0.77
SCUBE3-201ENST00000274938 AIMP1Q12904 312 aaKnown RBP10.21□□□□□ -0.77
SCUBE3-201ENST00000274938 SPA17Q15506 151 aa10.21□□□□□ -0.77
SCUBE3-201ENST00000274938 ANO10Q9NW15 660 aa10.21□□□□□ -0.77
SCUBE3-201ENST00000274938 PLEKHH1Q9ULM0 1364 aa10.21□□□□□ -0.77
SCUBE3-201ENST00000274938 GCOM1H8Y6P7 765 aaPredicted RBP10.21□□□□□ -0.78
SCUBE3-201ENST00000274938 HMOX1P09601 288 aa10.21□□□□□ -0.78
SCUBE3-201ENST00000274938 MYZAPP0CAP1 466 aa10.21□□□□□ -0.78
SCUBE3-201ENST00000274938 WDR63Q8IWG1 891 aa10.21□□□□□ -0.78
SCUBE3-201ENST00000274938 CASQ1P31415 396 aa10.21□□□□□ -0.78
SCUBE3-201ENST00000274938 CECR2Q9BXF3 1484 aa10.21□□□□□ -0.78
SCUBE3-201ENST00000274938 TDRD9Q8NDG6 1382 aaKnown RBP10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 CFAP100Q494V2 611 aa10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 CCDC183Q5T5S1 534 aa10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 CHD1LQ86WJ1 897 aa10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 PNISRQ8TF01 805 aaKnown RBP10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 PPP2R1AP30153 589 aa10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 PSME1Q06323 249 aa10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 ZNF428Q96B54 188 aa10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 MVPQ14764 893 aaKnown RBP10.2□□□□□ -0.78
SCUBE3-201ENST00000274938 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 GOLGA6L9A6NEM1 432 aa10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 CTAGE5O15320 804 aa10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 NOB1Q9ULX3 412 aaKnown RBP10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 KDM4AO75164 1064 aa10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 SCAND2PQ9GZW5 306 aaPredicted RBP10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 CBX1P83916 185 aa10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 STK3Q13188 491 aa10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 GSDMDP57764 484 aa10.19□□□□□ -0.78
SCUBE3-201ENST00000274938 SAMD1Q6SPF0 538 aaPredicted RBP10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 SPATA24Q86W54 205 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 PPM1EQ8WY54 764 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 MTMR7Q9Y216 660 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 PPP1R12BO60237 982 aaPredicted RBP10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 PLEKHO1Q53GL0 409 aaPredicted RBP10.18□□□□□ -0.78
SCUBE3-201ENST00000274938 KIF6Q6ZMV9 814 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms