RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
TRIM43-201ENST00000272395 C8orf37Q96NL8 207 aa11.44□□□□□ -0.58
TRIM43-201ENST00000272395 OVOS2A0A0J9YW53 1432 aa11.44□□□□□ -0.58
TRIM43-201ENST00000272395 OVOS2Q6IE36 1432 aa11.44□□□□□ -0.58
TRIM43-201ENST00000272395 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
TRIM43-201ENST00000272395 FBLN1P23142 703 aa11.43□□□□□ -0.58
TRIM43-201ENST00000272395 PPP2R1AP30153 589 aa11.43□□□□□ -0.58
TRIM43-201ENST00000272395 PIAS4Q8N2W9 510 aaPredicted RBP11.43□□□□□ -0.58
TRIM43-201ENST00000272395 COG3Q96JB2 828 aa11.43□□□□□ -0.58
TRIM43-201ENST00000272395 KIAA0232Q92628 1395 aa11.43□□□□□ -0.58
TRIM43-201ENST00000272395 CHRNA2Q15822 529 aa11.43□□□□□ -0.58
TRIM43-201ENST00000272395 ABCA3Q99758 1704 aa11.42□□□□□ -0.58
TRIM43-201ENST00000272395 PHRF1Q9P1Y6 1649 aaKnown RBP11.42□□□□□ -0.58
TRIM43-201ENST00000272395 FAM83GA6ND36 823 aa11.42□□□□□ -0.58
TRIM43-201ENST00000272395 MS4A1P11836 297 aa11.42□□□□□ -0.58
TRIM43-201ENST00000272395 ANP32AP39687 249 aaKnown RBP11.42□□□□□ -0.58
TRIM43-201ENST00000272395 WDR43Q15061 677 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRIM43-201ENST00000272395 NGEFQ8N5V2 710 aa11.42□□□□□ -0.58
TRIM43-201ENST00000272395 EXOC6Q8TAG9 804 aa11.42□□□□□ -0.58
TRIM43-201ENST00000272395 SLIT3O75094 1523 aa11.42□□□□□ -0.58
TRIM43-201ENST00000272395 MARF1Q9Y4F3 1742 aaKnown RBP11.42□□□□□ -0.58
TRIM43-201ENST00000272395 CRYBG1Q9Y4K1 1723 aa11.42□□□□□ -0.58
TRIM43-201ENST00000272395 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
TRIM43-201ENST00000272395 CDCA7LQ96GN5 454 aa11.4□□□□□ -0.58
TRIM43-201ENST00000272395 NGLY1Q96IV0 654 aa11.4□□□□□ -0.58
TRIM43-201ENST00000272395 PRDM11Q9NQV5 511 aa11.4□□□□□ -0.58
TRIM43-201ENST00000272395 ADAMTS8Q9UP79 889 aa11.4□□□□□ -0.58
TRIM43-201ENST00000272395 NFAT5O94916 1531 aa11.4□□□□□ -0.58
TRIM43-201ENST00000272395 KCNH5Q8NCM2 988 aa11.4□□□□□ -0.59
TRIM43-201ENST00000272395 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.59
TRIM43-201ENST00000272395 AFF2P51816 1311 aa11.39□□□□□ -0.59
TRIM43-201ENST00000272395 ZNF521Q96K83 1311 aa11.39□□□□□ -0.59
TRIM43-201ENST00000272395 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
TRIM43-201ENST00000272395 RRS1Q15050 365 aaKnown RBP11.39□□□□□ -0.59
TRIM43-201ENST00000272395 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
TRIM43-201ENST00000272395 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
TRIM43-201ENST00000272395 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
TRIM43-201ENST00000272395 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
TRIM43-201ENST00000272395 IPO9Q96P70 1041 aaKnown RBP11.38□□□□□ -0.59
TRIM43-201ENST00000272395 CPDO75976 1380 aa11.38□□□□□ -0.59
TRIM43-201ENST00000272395 USP54Q70EL1 1684 aa11.37□□□□□ -0.59
TRIM43-201ENST00000272395 RGS17Q9UGC6 210 aaPredicted RBP11.37□□□□□ -0.59
TRIM43-201ENST00000272395 NSD2O96028 1365 aa11.37□□□□□ -0.59
TRIM43-201ENST00000272395 MAP3K19Q56UN5 1328 aa11.37□□□□□ -0.59
TRIM43-201ENST00000272395 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
TRIM43-201ENST00000272395 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.36□□□□□ -0.59
TRIM43-201ENST00000272395 BTG4Q9NY30 223 aa11.36□□□□□ -0.59
TRIM43-201ENST00000272395 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
TRIM43-201ENST00000272395 FNBP4Q8N3X1 1017 aaPredicted RBP11.36□□□□□ -0.59
TRIM43-201ENST00000272395 USP21Q9UK80 565 aa11.36□□□□□ -0.59
TRIM43-201ENST00000272395 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
TRIM43-201ENST00000272395 SLIT2O94813 1529 aa11.35□□□□□ -0.59
TRIM43-201ENST00000272395 BCL9LQ86UU0 1499 aa11.35□□□□□ -0.59
TRIM43-201ENST00000272395 AATKQ6ZMQ8 1374 aa11.35□□□□□ -0.59
TRIM43-201ENST00000272395 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
TRIM43-201ENST00000272395 DUSP27Q5VZP5 1158 aa11.35□□□□□ -0.59
TRIM43-201ENST00000272395 STRN4Q9NRL3 753 aa11.35□□□□□ -0.59
TRIM43-201ENST00000272395 TRMT2AQ8IZ69 625 aaKnown RBP11.34□□□□□ -0.59
TRIM43-201ENST00000272395 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
TRIM43-201ENST00000272395 COL14A1Q05707 1796 aaKnown RBP11.33□□□□□ -0.59
TRIM43-201ENST00000272395 AMPHP49418 695 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 POTEAQ6S8J7 498 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 UNC5CLQ8IV45 518 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 POLKQ9UBT6 870 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 PLCH1Q4KWH8 1693 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 HOXC9P31274 260 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 SLFN5Q08AF3 891 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
TRIM43-201ENST00000272395 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
TRIM43-201ENST00000272395 LMO7Q8WWI1 1683 aa11.32□□□□□ -0.6
TRIM43-201ENST00000272395 PDE4AP27815 886 aa11.32□□□□□ -0.6
TRIM43-201ENST00000272395 EVA1CP58658 441 aa11.32□□□□□ -0.6
TRIM43-201ENST00000272395 ZNF772Q68DY9 489 aaPredicted RBP11.32□□□□□ -0.6
TRIM43-201ENST00000272395 LARP1Q6PKG0 1096 aaKnown RBP11.32□□□□□ -0.6
TRIM43-201ENST00000272395 IP6K1Q92551 441 aa11.32□□□□□ -0.6
TRIM43-201ENST00000272395 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
TRIM43-201ENST00000272395 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
TRIM43-201ENST00000272395 ANKRD26Q9UPS8 1709 aa11.31□□□□□ -0.6
TRIM43-201ENST00000272395 HSP90AB2PQ58FF8 381 aa11.31□□□□□ -0.6
TRIM43-201ENST00000272395 CCDC9Q9Y3X0 531 aaKnown RBP11.31□□□□□ -0.6
TRIM43-201ENST00000272395 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
TRIM43-201ENST00000272395 PEAK1Q9H792 1746 aa11.31□□□□□ -0.6
TRIM43-201ENST00000272395 ATRNO75882 1429 aa11.31□□□□□ -0.6
TRIM43-201ENST00000272395 ADRA2BP18089 450 aa11.3□□□□□ -0.6
TRIM43-201ENST00000272395 CENPQQ7L2Z9 268 aaPredicted RBP11.3□□□□□ -0.6
TRIM43-201ENST00000272395 ANKRD24Q8TF21 1146 aa11.3□□□□□ -0.6
TRIM43-201ENST00000272395 COL18A1P39060 1754 aa11.3□□□□□ -0.6
TRIM43-201ENST00000272395 E9PSI1 815 aa11.3□□□□□ -0.6
TRIM43-201ENST00000272395 PLIN1O60240 522 aa11.3□□□□□ -0.6
TRIM43-201ENST00000272395 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
TRIM43-201ENST00000272395 MTHFSP49914 203 aa11.3□□□□□ -0.6
TRIM43-201ENST00000272395 USP35Q9P2H5 1018 aa11.3□□□□□ -0.6
TRIM43-201ENST00000272395 TRPC5Q9UL62 973 aaPredicted RBP11.3□□□□□ -0.6
TRIM43-201ENST00000272395 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
TRIM43-201ENST00000272395 RTL1A6NKG5 1358 aa11.29□□□□□ -0.6
TRIM43-201ENST00000272395 FLT4P35916 1363 aa11.29□□□□□ -0.6
TRIM43-201ENST00000272395 NRAPQ86VF7 1730 aa11.29□□□□□ -0.6
TRIM43-201ENST00000272395 LTN1O94822 1766 aa11.29□□□□□ -0.6
TRIM43-201ENST00000272395 VIRMAQ69YN4 1812 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms